RNA–Protein interactions for RNA: ENST00000303758.7

HMGN1P35-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 35, humanhuman

BASIC

Gene HMGN1P35, Length 594 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P35-201ENST00000303758 LRRC29Q8WV35 223 aa9.06□□□□□ -0.96
HMGN1P35-201ENST00000303758 RTL8AQ9BWD3 113 aa9.06□□□□□ -0.96
HMGN1P35-201ENST00000303758 NIPAL2Q9H841 368 aa9.06□□□□□ -0.96
HMGN1P35-201ENST00000303758 ZMAT3Q9HA38 289 aaKnown RBP9.06□□□□□ -0.96
HMGN1P35-201ENST00000303758 ABCB9Q9NP78 766 aa9.06□□□□□ -0.96
HMGN1P35-201ENST00000303758 ESM1Q9NQ30 184 aa9.06□□□□□ -0.96
HMGN1P35-201ENST00000303758 ZNF391Q9UJN7 358 aa9.06□□□□□ -0.96
HMGN1P35-201ENST00000303758 LRP12Q9Y561 859 aa9.06□□□□□ -0.96
HMGN1P35-201ENST00000303758 IGHV3OR15-7A0A075B7D8 119 aa9.05□□□□□ -0.96
HMGN1P35-201ENST00000303758 KIR2DS1A0A191URI9 304 aa9.05□□□□□ -0.96
HMGN1P35-201ENST00000303758 DNAJC9-AS1A6NH13 148 aa9.05□□□□□ -0.96
HMGN1P35-201ENST00000303758 TMPRSS2O15393 492 aa9.05□□□□□ -0.96
HMGN1P35-201ENST00000303758 ATP5HO75947 161 aa9.05□□□□□ -0.96
HMGN1P35-201ENST00000303758 IGHV4-38-2P0DP08 117 aa9.05□□□□□ -0.96
HMGN1P35-201ENST00000303758 FASP25445 335 aa9.05□□□□□ -0.96
HMGN1P35-201ENST00000303758 PSMB10P40306 273 aa9.05□□□□□ -0.96
HMGN1P35-201ENST00000303758 FGF12P61328 243 aa9.05□□□□□ -0.96
HMGN1P35-201ENST00000303758 ESRRGP62508 458 aa9.05□□□□□ -0.96
HMGN1P35-201ENST00000303758 PAX2Q02962 417 aa9.05□□□□□ -0.96
HMGN1P35-201ENST00000303758 BNIP1Q12981 228 aa9.05□□□□□ -0.96
HMGN1P35-201ENST00000303758 PRDX4Q13162 271 aa9.05□□□□□ -0.96
HMGN1P35-201ENST00000303758 PTGES3Q15185 160 aaKnown RBP9.05□□□□□ -0.96
HMGN1P35-201ENST00000303758 MICBQ29980 383 aa9.05□□□□□ -0.96
HMGN1P35-201ENST00000303758 GPR157Q5UAW9 335 aa9.05□□□□□ -0.96
HMGN1P35-201ENST00000303758 DOK3Q7L591 496 aa9.05□□□□□ -0.96
HMGN1P35-201ENST00000303758 PRSS45Q7RTY3 260 aa9.05□□□□□ -0.96
HMGN1P35-201ENST00000303758 C3orf56Q8N813 242 aa9.05□□□□□ -0.96
HMGN1P35-201ENST00000303758 ZDHHC22Q8N966 263 aa9.05□□□□□ -0.96
HMGN1P35-201ENST00000303758 PNLDC1Q8NA58 520 aaKnown RBP9.05□□□□□ -0.96
HMGN1P35-201ENST00000303758 OR1M1Q8NGA1 313 aa9.05□□□□□ -0.96
HMGN1P35-201ENST00000303758 OR8B12Q8NGG6 310 aa9.05□□□□□ -0.96
HMGN1P35-201ENST00000303758 ST8SIA4Q92187 359 aa9.05□□□□□ -0.96
HMGN1P35-201ENST00000303758 PIGCQ92535 297 aa9.05□□□□□ -0.96
HMGN1P35-201ENST00000303758 UPRTQ96BW1 309 aa9.05□□□□□ -0.96
HMGN1P35-201ENST00000303758 DUX5Q96PT3 197 aa9.05□□□□□ -0.96
HMGN1P35-201ENST00000303758 HIST1H2AAQ96QV6 131 aa9.05□□□□□ -0.96
HMGN1P35-201ENST00000303758 PCGF1Q9BSM1 259 aa9.05□□□□□ -0.96
HMGN1P35-201ENST00000303758 MROQ9BYG7 248 aa9.05□□□□□ -0.96
HMGN1P35-201ENST00000303758 TTTY10Q9BZA0 68 aa9.05□□□□□ -0.96
HMGN1P35-201ENST00000303758 YIPF3Q9GZM5 350 aa9.05□□□□□ -0.96
HMGN1P35-201ENST00000303758 H2AFY2Q9P0M6 372 aaPredicted RBP9.05□□□□□ -0.96
HMGN1P35-201ENST00000303758 ZNF319Q9P2F9 582 aa9.05□□□□□ -0.96
HMGN1P35-201ENST00000303758 CTSZQ9UBR2 303 aa9.05□□□□□ -0.96
HMGN1P35-201ENST00000303758 IKZF2Q9UKS7 526 aa9.05□□□□□ -0.96
HMGN1P35-201ENST00000303758 KLHDC2Q9Y2U9 406 aa9.05□□□□□ -0.96
HMGN1P35-201ENST00000303758 RHBDD3Q9Y3P4 386 aa9.05□□□□□ -0.96
HMGN1P35-201ENST00000303758 MPC1Q9Y5U8 109 aa9.05□□□□□ -0.96
HMGN1P35-201ENST00000303758 TMEM14AQ9Y6G1 99 aa9.05□□□□□ -0.96
HMGN1P35-201ENST00000303758 TENM1Q9UKZ4 2725 aa9.05□□□□□ -0.96
HMGN1P35-201ENST00000303758 TMEM269A0A1B0GVZ9 245 aa9.04□□□□□ -0.96
HMGN1P35-201ENST00000303758 ZNF850A8MQ14 1090 aa9.04□□□□□ -0.96
HMGN1P35-201ENST00000303758 C22orf46C9J442 243 aa9.04□□□□□ -0.96
HMGN1P35-201ENST00000303758 G3V2T6 193 aa9.04□□□□□ -0.96
HMGN1P35-201ENST00000303758 PSMD9O00233 223 aa9.04□□□□□ -0.96
HMGN1P35-201ENST00000303758 CDIPTO14735 213 aa9.04□□□□□ -0.96
HMGN1P35-201ENST00000303758 CIB2O75838 187 aa9.04□□□□□ -0.96
HMGN1P35-201ENST00000303758 FCGR1AP12314 374 aa9.04□□□□□ -0.96
HMGN1P35-201ENST00000303758 EGR1P18146 543 aa9.04□□□□□ -0.96
HMGN1P35-201ENST00000303758 SLC2A5P22732 501 aa9.04□□□□□ -0.96
HMGN1P35-201ENST00000303758 CFPP27918 469 aa9.04□□□□□ -0.96
HMGN1P35-201ENST00000303758 DAPP51397 102 aa9.04□□□□□ -0.96
HMGN1P35-201ENST00000303758 HCCSP53701 268 aa9.04□□□□□ -0.96
HMGN1P35-201ENST00000303758 GMFBP60983 142 aa9.04□□□□□ -0.96
HMGN1P35-201ENST00000303758 CSNK2BP67870 215 aa9.04□□□□□ -0.96
HMGN1P35-201ENST00000303758 POU4F2Q12837 409 aa9.04□□□□□ -0.96
HMGN1P35-201ENST00000303758 ATP6AP1Q15904 470 aa9.04□□□□□ -0.96
HMGN1P35-201ENST00000303758 ZNF829Q3KNS6 432 aaPredicted RBP9.04□□□□□ -0.96
HMGN1P35-201ENST00000303758 METTL11BQ5VVY1 283 aa9.04□□□□□ -0.96
HMGN1P35-201ENST00000303758 FAHD1Q6P587 224 aa9.04□□□□□ -0.96
HMGN1P35-201ENST00000303758 ZNF841Q6ZN19 808 aa9.04□□□□□ -0.96
HMGN1P35-201ENST00000303758 THAP5Q7Z6K1 395 aa9.04□□□□□ -0.96
HMGN1P35-201ENST00000303758 FAM90A1Q86YD7 464 aa9.04□□□□□ -0.96
HMGN1P35-201ENST00000303758 ZDHHC13Q8IUH4 622 aa9.04□□□□□ -0.96
HMGN1P35-201ENST00000303758 ZDHHC23Q8IYP9 409 aa9.04□□□□□ -0.96
HMGN1P35-201ENST00000303758 BCL6BQ8N143 479 aaPredicted RBP9.04□□□□□ -0.96
HMGN1P35-201ENST00000303758 UTP4Q969X6 686 aaKnown RBP9.04□□□□□ -0.96
HMGN1P35-201ENST00000303758 SLC25A28Q96A46 364 aa9.04□□□□□ -0.96
HMGN1P35-201ENST00000303758 CNN2Q99439 309 aaKnown RBP9.04□□□□□ -0.96
HMGN1P35-201ENST00000303758 TEAD3Q99594 435 aa9.04□□□□□ -0.96
HMGN1P35-201ENST00000303758 RNPEPL1Q9HAU8 725 aa9.04□□□□□ -0.96
HMGN1P35-201ENST00000303758 DNAJB11Q9UBS4 358 aa9.04□□□□□ -0.96
HMGN1P35-201ENST00000303758 ENOPH1Q9UHY7 261 aa9.04□□□□□ -0.96
HMGN1P35-201ENST00000303758 GTF2A1LQ9UNN4 478 aa9.04□□□□□ -0.96
HMGN1P35-201ENST00000303758 TMEM89A2RUT3 159 aa9.03□□□□□ -0.96
HMGN1P35-201ENST00000303758 NKX6-3A6NJ46 265 aa9.03□□□□□ -0.96
HMGN1P35-201ENST00000303758 SLC22A31A6NKX4 558 aa9.03□□□□□ -0.96
HMGN1P35-201ENST00000303758 TMEM210A6NLX4 147 aa9.03□□□□□ -0.96
HMGN1P35-201ENST00000303758 DVL1O14640 695 aa9.03□□□□□ -0.96
HMGN1P35-201ENST00000303758 PRKYO43930 277 aa9.03□□□□□ -0.96
HMGN1P35-201ENST00000303758 TOX4O94842 621 aa9.03□□□□□ -0.96
HMGN1P35-201ENST00000303758 LIPFP07098 398 aa9.03□□□□□ -0.96
HMGN1P35-201ENST00000303758 MUC1P15941 1255 aaPredicted RBP9.03□□□□□ -0.96
HMGN1P35-201ENST00000303758 ALOX5APP20292 161 aa9.03□□□□□ -0.96
HMGN1P35-201ENST00000303758 PRTN3P24158 256 aa9.03□□□□□ -0.96
HMGN1P35-201ENST00000303758 ACKR3P25106 362 aa9.03□□□□□ -0.96
HMGN1P35-201ENST00000303758 MAP2K3P46734 347 aa9.03□□□□□ -0.96
HMGN1P35-201ENST00000303758 RIDAP52758 137 aaKnown RBP9.03□□□□□ -0.96
HMGN1P35-201ENST00000303758 TEX36Q5VZQ5 186 aa9.03□□□□□ -0.96
HMGN1P35-201ENST00000303758 DEGS2Q6QHC5 323 aa9.03□□□□□ -0.96
HMGN1P35-201ENST00000303758 WDR82Q6UXN9 313 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms