RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 MMP15P51511 669 aa5.02□□□□□ -1.61
SSX3-201ENST00000298396 CDH15P55291 814 aa5.02□□□□□ -1.61
SSX3-201ENST00000298396 ACTC1P68032 377 aa5.02□□□□□ -1.61
SSX3-201ENST00000298396 ACTA1P68133 377 aa5.02□□□□□ -1.61
SSX3-201ENST00000298396 FAM3AP98173 230 aa5.02□□□□□ -1.61
SSX3-201ENST00000298396 LSAMPQ13449 338 aa5.02□□□□□ -1.61
SSX3-201ENST00000298396 TAF13Q15543 124 aa5.02□□□□□ -1.61
SSX3-201ENST00000298396 OR8B8Q15620 311 aa5.02□□□□□ -1.61
SSX3-201ENST00000298396 RBM48Q5RL73 367 aaKnown RBP5.02□□□□□ -1.61
SSX3-201ENST00000298396 OR2T2Q6IF00 324 aa5.02□□□□□ -1.61
SSX3-201ENST00000298396 Q6ZSR3 168 aa5.02□□□□□ -1.61
SSX3-201ENST00000298396 ELMOD2Q8IZ81 293 aa5.02□□□□□ -1.61
SSX3-201ENST00000298396 RDH10Q8IZV5 341 aa5.02□□□□□ -1.61
SSX3-201ENST00000298396 OR5AS1Q8N127 324 aa5.02□□□□□ -1.61
SSX3-201ENST00000298396 SYS1Q8N2H4 156 aa5.02□□□□□ -1.61
SSX3-201ENST00000298396 MUC15Q8N387 334 aa5.02□□□□□ -1.61
SSX3-201ENST00000298396 NANOGP1Q8N7R0 232 aa5.02□□□□□ -1.61
SSX3-201ENST00000298396 ZNF540Q8NDQ6 660 aa5.02□□□□□ -1.61
SSX3-201ENST00000298396 OR2G2Q8NGZ5 317 aa5.02□□□□□ -1.61
SSX3-201ENST00000298396 OR52N1Q8NH53 320 aa5.02□□□□□ -1.61
SSX3-201ENST00000298396 SNX33Q8WV41 574 aa5.02□□□□□ -1.61
SSX3-201ENST00000298396 HAVCR1Q96D42 359 aa5.02□□□□□ -1.61
SSX3-201ENST00000298396 CMBLQ96DG6 245 aa5.02□□□□□ -1.61
SSX3-201ENST00000298396 REEP6Q96HR9 211 aa5.02□□□□□ -1.61
SSX3-201ENST00000298396 PGAM5Q96HS1 289 aa5.02□□□□□ -1.61
SSX3-201ENST00000298396 KRTAP4-12Q9BQ66 201 aa5.02□□□□□ -1.61
SSX3-201ENST00000298396 CDCA4Q9BXL8 241 aa5.02□□□□□ -1.61
SSX3-201ENST00000298396 MROQ9BYG7 248 aa5.02□□□□□ -1.61
SSX3-201ENST00000298396 FGF23Q9GZV9 251 aaPredicted RBP5.02□□□□□ -1.61
SSX3-201ENST00000298396 NIPAL2Q9H841 368 aa5.02□□□□□ -1.61
SSX3-201ENST00000298396 CBLN4Q9NTU7 201 aa5.02□□□□□ -1.61
SSX3-201ENST00000298396 PURGQ9UJV8 347 aaKnown RBP5.02□□□□□ -1.61
SSX3-201ENST00000298396 POU2F3Q9UKI9 436 aa5.02□□□□□ -1.61
SSX3-201ENST00000298396 OR52A1Q9UKL2 312 aa5.02□□□□□ -1.61
SSX3-201ENST00000298396 LAMP3Q9UQV4 416 aa5.02□□□□□ -1.61
SSX3-201ENST00000298396 CAB39Q9Y376 341 aaPredicted RBP5.02□□□□□ -1.61
SSX3-201ENST00000298396 EXOSC1Q9Y3B2 195 aaKnown RBP5.02□□□□□ -1.61
SSX3-201ENST00000298396 CMAHPQ9Y471 501 aa5.02□□□□□ -1.61
SSX3-201ENST00000298396 PCDHGB1Q9Y5G3 927 aa5.02□□□□□ -1.61
SSX3-201ENST00000298396 N6AMT1Q9Y5N5 214 aa5.02□□□□□ -1.61
SSX3-201ENST00000298396 F8P00451 2351 aa5.02□□□□□ -1.61
SSX3-201ENST00000298396 KIAA2026Q5HYC2 2103 aa5.02□□□□□ -1.61
SSX3-201ENST00000298396 A0A0U1RQV5 110 aa5.01□□□□□ -1.61
SSX3-201ENST00000298396 LOC107986453A0A1B0GWG9 222 aa5.01□□□□□ -1.61
SSX3-201ENST00000298396 ACOD1A6NK06 481 aa5.01□□□□□ -1.61
SSX3-201ENST00000298396 IQCF6A8MYZ5 107 aa5.01□□□□□ -1.61
SSX3-201ENST00000298396 B9A039 149 aa5.01□□□□□ -1.61
SSX3-201ENST00000298396 LOC110117498-PIK3R3F6TDL0 507 aa5.01□□□□□ -1.61
SSX3-201ENST00000298396 H0YL77 283 aa5.01□□□□□ -1.61
SSX3-201ENST00000298396 H3BSH0 61 aa5.01□□□□□ -1.61
SSX3-201ENST00000298396 P2RY10O00398 339 aa5.01□□□□□ -1.61
SSX3-201ENST00000298396 OGG1O15527 345 aa5.01□□□□□ -1.61
SSX3-201ENST00000298396 XRCC2O43543 280 aa5.01□□□□□ -1.61
SSX3-201ENST00000298396 RGS10O43665 173 aa5.01□□□□□ -1.61
SSX3-201ENST00000298396 LY6HO94772 140 aa5.01□□□□□ -1.61
SSX3-201ENST00000298396 PAX1P15863 534 aa5.01□□□□□ -1.61
SSX3-201ENST00000298396 EVX1P49640 407 aa5.01□□□□□ -1.61
SSX3-201ENST00000298396 KLF3P57682 345 aaPredicted RBP5.01□□□□□ -1.61
SSX3-201ENST00000298396 GABARAPL2P60520 117 aa5.01□□□□□ -1.61
SSX3-201ENST00000298396 RPS23P62266 143 aaKnown RBP5.01□□□□□ -1.61
SSX3-201ENST00000298396 RPS11P62280 158 aaKnown RBP eCLIP5.01□□□□□ -1.61
SSX3-201ENST00000298396 ACTA2P62736 377 aa5.01□□□□□ -1.61
SSX3-201ENST00000298396 ACTG2P63267 376 aa5.01□□□□□ -1.61
SSX3-201ENST00000298396 CSNK2BP67870 215 aa5.01□□□□□ -1.61
SSX3-201ENST00000298396 MED21Q13503 144 aa5.01□□□□□ -1.61
SSX3-201ENST00000298396 ALKBH1Q13686 389 aaKnown RBP5.01□□□□□ -1.61
SSX3-201ENST00000298396 CDK5R1Q15078 307 aa5.01□□□□□ -1.61
SSX3-201ENST00000298396 ODF4Q2M2E3 257 aa5.01□□□□□ -1.61
SSX3-201ENST00000298396 GFOD2Q3B7J2 385 aa5.01□□□□□ -1.61
SSX3-201ENST00000298396 ZNF829Q3KNS6 432 aaPredicted RBP5.01□□□□□ -1.61
SSX3-201ENST00000298396 ZNF718Q3SXZ3 478 aa5.01□□□□□ -1.61
SSX3-201ENST00000298396 DMKNQ6E0U4 476 aaPredicted RBP5.01□□□□□ -1.61
SSX3-201ENST00000298396 ASPHD2Q6ICH7 369 aa5.01□□□□□ -1.61
SSX3-201ENST00000298396 KRT74Q7RTS7 529 aa5.01□□□□□ -1.61
SSX3-201ENST00000298396 PRSS48Q7RTY5 328 aa5.01□□□□□ -1.61
SSX3-201ENST00000298396 KLBQ86Z14 1044 aa5.01□□□□□ -1.61
SSX3-201ENST00000298396 TGIF2LYQ8IUE0 185 aa5.01□□□□□ -1.61
SSX3-201ENST00000298396 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.01□□□□□ -1.61
SSX3-201ENST00000298396 FBXL14Q8N1E6 418 aa5.01□□□□□ -1.61
SSX3-201ENST00000298396 STX19Q8N4C7 294 aa5.01□□□□□ -1.61
SSX3-201ENST00000298396 KLHL36Q8N4N3 616 aa5.01□□□□□ -1.61
SSX3-201ENST00000298396 ZFP41Q8N8Y5 198 aa5.01□□□□□ -1.61
SSX3-201ENST00000298396 OR56B2PQ8NGI1 322 aa5.01□□□□□ -1.61
SSX3-201ENST00000298396 OR52H1Q8NGJ2 320 aa5.01□□□□□ -1.61
SSX3-201ENST00000298396 OR51A4Q8NGJ6 313 aa5.01□□□□□ -1.61
SSX3-201ENST00000298396 SYNPRQ8TBG9 265 aa5.01□□□□□ -1.61
SSX3-201ENST00000298396 OR51E1Q8TCB6 317 aa5.01□□□□□ -1.61
SSX3-201ENST00000298396 DVL3Q92997 716 aaPredicted RBP5.01□□□□□ -1.61
SSX3-201ENST00000298396 PGLYRP3Q96LB9 341 aa5.01□□□□□ -1.61
SSX3-201ENST00000298396 CLUHP3Q96NS8 147 aa5.01□□□□□ -1.61
SSX3-201ENST00000298396 SORCS2Q96PQ0 1159 aa5.01□□□□□ -1.61
SSX3-201ENST00000298396 CCL19Q99731 98 aa5.01□□□□□ -1.61
SSX3-201ENST00000298396 PDCD1LG2Q9BQ51 273 aa5.01□□□□□ -1.61
SSX3-201ENST00000298396 CACNG6Q9BXT2 260 aa5.01□□□□□ -1.61
SSX3-201ENST00000298396 Q9H521 79 aa5.01□□□□□ -1.61
SSX3-201ENST00000298396 MSL2Q9HCI7 577 aa5.01□□□□□ -1.61
SSX3-201ENST00000298396 GPR84Q9NQS5 396 aa5.01□□□□□ -1.61
SSX3-201ENST00000298396 ZNF701Q9NV72 531 aaPredicted RBP5.01□□□□□ -1.61
SSX3-201ENST00000298396 TAAR3PQ9P1P4 343 aa5.01□□□□□ -1.61
SSX3-201ENST00000298396 EIF3KQ9UBQ5 218 aaKnown RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms