RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 FAM96BQ9Y3D0 163 aa21.5■■□□□ 1.03
SPTSSA-201ENST00000298130 MTCH2Q9Y6C9 303 aa21.5■■□□□ 1.03
SPTSSA-201ENST00000298130 S100A10P60903 97 aa21.49■■□□□ 1.03
SPTSSA-201ENST00000298130 AIMP2Q13155 320 aaKnown RBP21.49■■□□□ 1.03
SPTSSA-201ENST00000298130 OR5H2Q8NGV7 314 aa21.49■■□□□ 1.03
SPTSSA-201ENST00000298130 DNTTIP1Q9H147 329 aa21.49■■□□□ 1.03
SPTSSA-201ENST00000298130 MYOTQ9UBF9 498 aa21.49■■□□□ 1.03
SPTSSA-201ENST00000298130 WIF1Q9Y5W5 379 aa21.49■■□□□ 1.03
SPTSSA-201ENST00000298130 STMND1H3BQB6 276 aa21.49■■□□□ 1.03
SPTSSA-201ENST00000298130 MASP2O00187 686 aa21.49■■□□□ 1.03
SPTSSA-201ENST00000298130 ATG12O94817 140 aa21.49■■□□□ 1.03
SPTSSA-201ENST00000298130 SRFP11831 508 aa21.49■■□□□ 1.03
SPTSSA-201ENST00000298130 RIPPLY1Q0D2K3 151 aa21.49■■□□□ 1.03
SPTSSA-201ENST00000298130 CLRN3Q8NCR9 226 aa21.49■■□□□ 1.03
SPTSSA-201ENST00000298130 PIGTQ969N2 578 aa21.49■■□□□ 1.03
SPTSSA-201ENST00000298130 RTBDNQ9BSG5 229 aaPredicted RBP21.49■■□□□ 1.03
SPTSSA-201ENST00000298130 CYTL1Q9NRR1 136 aa21.49■■□□□ 1.03
SPTSSA-201ENST00000298130 COL5A1P20908 1838 aaPredicted RBP21.49■■□□□ 1.03
SPTSSA-201ENST00000298130 OR5H15A6NDH6 313 aa21.48■■□□□ 1.03
SPTSSA-201ENST00000298130 FAHP16930 419 aa21.48■■□□□ 1.03
SPTSSA-201ENST00000298130 CSNK2A1P68400 391 aaPredicted RBP21.48■■□□□ 1.03
SPTSSA-201ENST00000298130 ZNF585AQ6P3V2 769 aa21.48■■□□□ 1.03
SPTSSA-201ENST00000298130 PNLDC1Q8NA58 520 aaKnown RBP21.48■■□□□ 1.03
SPTSSA-201ENST00000298130 CSNK2A3Q8NEV1 391 aa21.48■■□□□ 1.03
SPTSSA-201ENST00000298130 KCNG3Q8TAE7 436 aa21.48■■□□□ 1.03
SPTSSA-201ENST00000298130 HDHD3Q9BSH5 251 aaPredicted RBP21.48■■□□□ 1.03
SPTSSA-201ENST00000298130 PCDHB16Q9NRJ7 776 aa21.48■■□□□ 1.03
SPTSSA-201ENST00000298130 WDFY4Q6ZS81 3184 aa21.48■■□□□ 1.03
SPTSSA-201ENST00000298130 TMEM218A2RU14 115 aa21.48■■□□□ 1.03
SPTSSA-201ENST00000298130 SFTPBP07988 381 aa21.48■■□□□ 1.03
SPTSSA-201ENST00000298130 OR3A2P47893 321 aa21.48■■□□□ 1.03
SPTSSA-201ENST00000298130 RAB32Q13637 225 aa21.48■■□□□ 1.03
SPTSSA-201ENST00000298130 CRB3Q9BUF7 120 aa21.48■■□□□ 1.03
SPTSSA-201ENST00000298130 PIGMQ9H3S5 423 aa21.48■■□□□ 1.03
SPTSSA-201ENST00000298130 ZNF701Q9NV72 531 aaPredicted RBP21.48■■□□□ 1.03
SPTSSA-201ENST00000298130 EHFQ9NZC4 300 aa21.48■■□□□ 1.03
SPTSSA-201ENST00000298130 FLVCR1Q9Y5Y0 555 aa21.48■■□□□ 1.03
SPTSSA-201ENST00000298130 IGKV1D-8A0A087WSZ0 117 aa21.48■■□□□ 1.03
SPTSSA-201ENST00000298130 ZNF726A6NNF4 738 aa21.48■■□□□ 1.03
SPTSSA-201ENST00000298130 DBHP09172 617 aa21.48■■□□□ 1.03
SPTSSA-201ENST00000298130 MPZP25189 248 aa21.48■■□□□ 1.03
SPTSSA-201ENST00000298130 SNU13P55769 128 aaKnown RBP21.48■■□□□ 1.03
SPTSSA-201ENST00000298130 GPR85P60893 370 aa21.48■■□□□ 1.03
SPTSSA-201ENST00000298130 PHYHD1Q5SRE7 291 aa21.48■■□□□ 1.03
SPTSSA-201ENST00000298130 GUSBP11Q6P575 273 aa21.48■■□□□ 1.03
SPTSSA-201ENST00000298130 LDLRAD3Q86YD5 345 aa21.48■■□□□ 1.03
SPTSSA-201ENST00000298130 BAP18Q8IXM2 172 aa21.48■■□□□ 1.03
SPTSSA-201ENST00000298130 LYZL4Q96KX0 146 aa21.48■■□□□ 1.03
SPTSSA-201ENST00000298130 MRGPRX4Q96LA9 322 aa21.48■■□□□ 1.03
SPTSSA-201ENST00000298130 HRH4Q9H3N8 390 aa21.48■■□□□ 1.03
SPTSSA-201ENST00000298130 ZNF768Q9H5H4 540 aaKnown RBP21.48■■□□□ 1.03
SPTSSA-201ENST00000298130 SRPK3Q9UPE1 567 aa21.48■■□□□ 1.03
SPTSSA-201ENST00000298130 BLVRBP30043 206 aaPredicted RBP21.47■■□□□ 1.03
SPTSSA-201ENST00000298130 PHYHIPLQ96FC7 376 aa21.47■■□□□ 1.03
SPTSSA-201ENST00000298130 PGAM5Q96HS1 289 aa21.47■■□□□ 1.03
SPTSSA-201ENST00000298130 ZNF581Q9P0T4 197 aa21.47■■□□□ 1.03
SPTSSA-201ENST00000298130 A0A1W2PNV4 684 aa21.47■■□□□ 1.03
SPTSSA-201ENST00000298130 AGPAT2O15120 278 aa21.47■■□□□ 1.03
SPTSSA-201ENST00000298130 BCAT2O15382 392 aaPredicted RBP21.47■■□□□ 1.03
SPTSSA-201ENST00000298130 WDPCPO95876 746 aa21.47■■□□□ 1.03
SPTSSA-201ENST00000298130 CHRM2P08172 466 aa21.47■■□□□ 1.03
SPTSSA-201ENST00000298130 SLC25A47Q6Q0C1 308 aa21.47■■□□□ 1.03
SPTSSA-201ENST00000298130 OR6S1Q8NH40 331 aa21.47■■□□□ 1.03
SPTSSA-201ENST00000298130 NUBPLQ8TB37 319 aa21.47■■□□□ 1.03
SPTSSA-201ENST00000298130 TREM1Q9NP99 234 aa21.47■■□□□ 1.03
SPTSSA-201ENST00000298130 MUC3AQ02505 3323 aa21.46■■□□□ 1.03
SPTSSA-201ENST00000298130 ARPC4-TTLL3A0A0A6YYG9 625 aa21.46■■□□□ 1.03
SPTSSA-201ENST00000298130 F8W036 122 aa21.46■■□□□ 1.03
SPTSSA-201ENST00000298130 TPT1P13693 172 aaKnown RBP21.46■■□□□ 1.03
SPTSSA-201ENST00000298130 BLOC1S1P78537 153 aa21.46■■□□□ 1.03
SPTSSA-201ENST00000298130 KISS1Q15726 138 aa21.46■■□□□ 1.03
SPTSSA-201ENST00000298130 AADACL3Q5VUY0 350 aa21.46■■□□□ 1.03
SPTSSA-201ENST00000298130 WDSUB1Q8N9V3 476 aa21.46■■□□□ 1.03
SPTSSA-201ENST00000298130 TLNRD1Q9H1K6 362 aa21.46■■□□□ 1.03
SPTSSA-201ENST00000298130 MFNGO00587 321 aa21.46■■□□□ 1.03
SPTSSA-201ENST00000298130 SFT2D2O95562 160 aa21.46■■□□□ 1.03
SPTSSA-201ENST00000298130 NAT1P18440 290 aa21.46■■□□□ 1.03
SPTSSA-201ENST00000298130 RCC1P18754 421 aaPredicted RBP21.46■■□□□ 1.03
SPTSSA-201ENST00000298130 FAHD2BQ6P2I3 314 aaPredicted RBP21.46■■□□□ 1.03
SPTSSA-201ENST00000298130 OR4A4PQ8NGN8 299 aa21.46■■□□□ 1.03
SPTSSA-201ENST00000298130 FAHD2AQ96GK7 314 aa21.46■■□□□ 1.03
SPTSSA-201ENST00000298130 OR10A2Q9H208 303 aa21.46■■□□□ 1.03
SPTSSA-201ENST00000298130 SLC6A15Q9H2J7 730 aa21.46■■□□□ 1.03
SPTSSA-201ENST00000298130 TEX13DA0A0J9YY54 714 aaPredicted RBP21.45■■□□□ 1.02
SPTSSA-201ENST00000298130 ZNF705EA8MWA4 302 aaPredicted RBP21.45■■□□□ 1.02
SPTSSA-201ENST00000298130 CPEB2Q7Z5Q1 589 aaKnown RBP21.45■■□□□ 1.02
SPTSSA-201ENST00000298130 CADM4Q8NFZ8 388 aa21.45■■□□□ 1.02
SPTSSA-201ENST00000298130 NPIPB13A6NJU9 1138 aa21.45■■□□□ 1.02
SPTSSA-201ENST00000298130 NPIPB4C9JG80 1138 aa21.45■■□□□ 1.02
SPTSSA-201ENST00000298130 GABRR1P24046 479 aa21.45■■□□□ 1.02
SPTSSA-201ENST00000298130 UBE2V2Q15819 145 aa21.45■■□□□ 1.02
SPTSSA-201ENST00000298130 CDCP2Q5VXM1 449 aa21.45■■□□□ 1.02
SPTSSA-201ENST00000298130 CLEC9AQ6UXN8 241 aa21.45■■□□□ 1.02
SPTSSA-201ENST00000298130 C6orf201Q7Z4U5 140 aa21.45■■□□□ 1.02
SPTSSA-201ENST00000298130 OR2M3Q8NG83 312 aa21.45■■□□□ 1.02
SPTSSA-201ENST00000298130 JSRP1Q96MG2 331 aaPredicted RBP21.45■■□□□ 1.02
SPTSSA-201ENST00000298130 RASL10BQ96S79 203 aa21.45■■□□□ 1.02
SPTSSA-201ENST00000298130 TGIF2Q9GZN2 237 aa21.45■■□□□ 1.02
SPTSSA-201ENST00000298130 PARP12Q9H0J9 701 aaKnown RBP21.45■■□□□ 1.02
SPTSSA-201ENST00000298130 ID4P47928 161 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms