RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 LCATP04180 440 aa7.98□□□□□ -1.13
PDPN-201ENST00000294489 CD3DP04234 171 aa7.98□□□□□ -1.13
PDPN-201ENST00000294489 ANXA3P12429 323 aa7.98□□□□□ -1.13
PDPN-201ENST00000294489 PRF1P14222 555 aa7.98□□□□□ -1.13
PDPN-201ENST00000294489 GZMKP49863 264 aa7.98□□□□□ -1.13
PDPN-201ENST00000294489 PSG4Q00888 419 aa7.98□□□□□ -1.13
PDPN-201ENST00000294489 FAPQ12884 760 aa7.98□□□□□ -1.13
PDPN-201ENST00000294489 C4orf46Q504U0 113 aa7.98□□□□□ -1.13
PDPN-201ENST00000294489 RPUSD3Q6P087 351 aaKnown RBP7.98□□□□□ -1.13
PDPN-201ENST00000294489 LIX1LQ8IVB5 337 aa7.98□□□□□ -1.13
PDPN-201ENST00000294489 TUSC5Q8IXB3 177 aa7.98□□□□□ -1.13
PDPN-201ENST00000294489 GABRG1Q8N1C3 465 aa7.98□□□□□ -1.13
PDPN-201ENST00000294489 AKR7LQ8NHP1 331 aa7.98□□□□□ -1.13
PDPN-201ENST00000294489 FNDC9Q8TBE3 224 aa7.98□□□□□ -1.13
PDPN-201ENST00000294489 AQP3Q92482 292 aa7.98□□□□□ -1.13
PDPN-201ENST00000294489 MED30Q96HR3 178 aa7.98□□□□□ -1.13
PDPN-201ENST00000294489 RNF170Q96K19 258 aa7.98□□□□□ -1.13
PDPN-201ENST00000294489 GINS4Q9BRT9 223 aa7.98□□□□□ -1.13
PDPN-201ENST00000294489 OR2H1Q9GZK4 316 aa7.98□□□□□ -1.13
PDPN-201ENST00000294489 CHST5Q9GZS9 411 aa7.98□□□□□ -1.13
PDPN-201ENST00000294489 CALHM2Q9HA72 323 aa7.98□□□□□ -1.13
PDPN-201ENST00000294489 CLCF1Q9UBD9 225 aa7.98□□□□□ -1.13
PDPN-201ENST00000294489 GHRLQ9UBU3 117 aa7.98□□□□□ -1.13
PDPN-201ENST00000294489 ZNF391Q9UJN7 358 aa7.98□□□□□ -1.13
PDPN-201ENST00000294489 ING4Q9UNL4 249 aa7.98□□□□□ -1.13
PDPN-201ENST00000294489 ZNF587BE7ETH6 402 aa7.98□□□□□ -1.13
PDPN-201ENST00000294489 RAB3DO95716 219 aa7.98□□□□□ -1.13
PDPN-201ENST00000294489 MMP7P09237 267 aaPredicted RBP7.98□□□□□ -1.13
PDPN-201ENST00000294489 PATE4P0C8F1 98 aa7.98□□□□□ -1.13
PDPN-201ENST00000294489 FAHP16930 419 aa7.98□□□□□ -1.13
PDPN-201ENST00000294489 OR3A4PP47883 348 aa7.98□□□□□ -1.13
PDPN-201ENST00000294489 KISS1Q15726 138 aa7.98□□□□□ -1.13
PDPN-201ENST00000294489 SNAI3Q3KNW1 292 aa7.98□□□□□ -1.13
PDPN-201ENST00000294489 ZNF260Q3ZCT1 412 aa7.98□□□□□ -1.13
PDPN-201ENST00000294489 CDNFQ49AH0 187 aa7.98□□□□□ -1.13
PDPN-201ENST00000294489 Q6ZS92 163 aa7.98□□□□□ -1.13
PDPN-201ENST00000294489 ZNF584Q8IVC4 421 aa7.98□□□□□ -1.13
PDPN-201ENST00000294489 SKA3Q8IX90 412 aa7.98□□□□□ -1.13
PDPN-201ENST00000294489 SEMA6DQ8NFY4 1073 aa7.98□□□□□ -1.13
PDPN-201ENST00000294489 SGK3Q96BR1 496 aa7.98□□□□□ -1.13
PDPN-201ENST00000294489 URM1Q9BTM9 101 aaKnown RBP7.98□□□□□ -1.13
PDPN-201ENST00000294489 CST11Q9H112 138 aa7.98□□□□□ -1.13
PDPN-201ENST00000294489 ATPIF1Q9UII2 106 aa7.98□□□□□ -1.13
PDPN-201ENST00000294489 IGKV1-9A0A0C4DH69 117 aa7.97□□□□□ -1.13
PDPN-201ENST00000294489 ZNF736B4DX44 427 aaPredicted RBP7.97□□□□□ -1.13
PDPN-201ENST00000294489 ATP6V1G1O75348 118 aa7.97□□□□□ -1.13
PDPN-201ENST00000294489 MPIG6BO95866 241 aa7.97□□□□□ -1.13
PDPN-201ENST00000294489 FCER2P06734 321 aa7.97□□□□□ -1.13
PDPN-201ENST00000294489 PMP22Q01453 160 aa7.97□□□□□ -1.13
PDPN-201ENST00000294489 ZNF169Q14929 603 aaPredicted RBP7.97□□□□□ -1.13
PDPN-201ENST00000294489 CDK10Q15131 360 aa7.97□□□□□ -1.13
PDPN-201ENST00000294489 SFRP5Q5T4F7 317 aa7.97□□□□□ -1.13
PDPN-201ENST00000294489 GLDNQ6ZMI3 551 aaPredicted RBP7.97□□□□□ -1.13
PDPN-201ENST00000294489 NCCRP1Q6ZVX7 275 aaPredicted RBP7.97□□□□□ -1.13
PDPN-201ENST00000294489 OR11H7Q8NGC8 314 aa7.97□□□□□ -1.13
PDPN-201ENST00000294489 OR51S1Q8NGJ8 323 aa7.97□□□□□ -1.13
PDPN-201ENST00000294489 OR10R2Q8NGX6 335 aa7.97□□□□□ -1.13
PDPN-201ENST00000294489 REEP6Q96HR9 211 aa7.97□□□□□ -1.13
PDPN-201ENST00000294489 HYLS1Q96M11 299 aa7.97□□□□□ -1.13
PDPN-201ENST00000294489 S100A13Q99584 98 aa7.97□□□□□ -1.13
PDPN-201ENST00000294489 TMEM59Q9BXS4 323 aa7.97□□□□□ -1.13
PDPN-201ENST00000294489 SLC7A10Q9NS82 523 aa7.97□□□□□ -1.13
PDPN-201ENST00000294489 UPB1Q9UBR1 384 aa7.97□□□□□ -1.13
PDPN-201ENST00000294489 ZFHX4Q86UP3 3567 aa7.97□□□□□ -1.13
PDPN-201ENST00000294489 KLK10O43240 276 aa7.97□□□□□ -1.13
PDPN-201ENST00000294489 CREBL2O60519 120 aaPredicted RBP7.97□□□□□ -1.13
PDPN-201ENST00000294489 SS18L1O75177 396 aaPredicted RBP7.97□□□□□ -1.13
PDPN-201ENST00000294489 IL5P05113 134 aa7.97□□□□□ -1.13
PDPN-201ENST00000294489 MELTFP08582 738 aa7.97□□□□□ -1.13
PDPN-201ENST00000294489 MECP2P51608 486 aaKnown RBP7.97□□□□□ -1.13
PDPN-201ENST00000294489 RIPPLY1Q0D2K3 151 aa7.97□□□□□ -1.13
PDPN-201ENST00000294489 ZADH2Q8N4Q0 377 aa7.97□□□□□ -1.13
PDPN-201ENST00000294489 OR4D10Q8NGI6 311 aa7.97□□□□□ -1.13
PDPN-201ENST00000294489 DVL3Q92997 716 aaPredicted RBP7.97□□□□□ -1.13
PDPN-201ENST00000294489 APH1AQ96BI3 265 aa7.97□□□□□ -1.13
PDPN-201ENST00000294489 CPNE2Q96FN4 548 aaPredicted RBP7.97□□□□□ -1.13
PDPN-201ENST00000294489 WNT5BQ9H1J7 359 aa7.97□□□□□ -1.13
PDPN-201ENST00000294489 RGCCQ9H4X1 137 aa7.97□□□□□ -1.13
PDPN-201ENST00000294489 RANBP3Q9H6Z4 567 aaPredicted RBP7.97□□□□□ -1.13
PDPN-201ENST00000294489 GLRX2Q9NS18 164 aa7.97□□□□□ -1.13
PDPN-201ENST00000294489 ZNF224Q9NZL3 707 aa7.97□□□□□ -1.13
PDPN-201ENST00000294489 ITGB1BP2Q9UKP3 347 aa7.97□□□□□ -1.13
PDPN-201ENST00000294489 MSRB2Q9Y3D2 182 aa7.97□□□□□ -1.13
PDPN-201ENST00000294489 FABP7O15540 132 aa7.96□□□□□ -1.13
PDPN-201ENST00000294489 CDC14BO60729 498 aa7.96□□□□□ -1.13
PDPN-201ENST00000294489 CRTAPO75718 401 aaPredicted RBP7.96□□□□□ -1.13
PDPN-201ENST00000294489 HPXP02790 462 aa7.96□□□□□ -1.13
PDPN-201ENST00000294489 RLN1P04808 185 aa7.96□□□□□ -1.13
PDPN-201ENST00000294489 SULT1A3P0DMM9 295 aa7.96□□□□□ -1.13
PDPN-201ENST00000294489 SULT1A4P0DMN0 295 aa7.96□□□□□ -1.13
PDPN-201ENST00000294489 FCGR2AP12318 317 aa7.96□□□□□ -1.13
PDPN-201ENST00000294489 PTGFRP43088 359 aa7.96□□□□□ -1.13
PDPN-201ENST00000294489 RAD52P43351 418 aa7.96□□□□□ -1.13
PDPN-201ENST00000294489 UBE2V2Q15819 145 aa7.96□□□□□ -1.13
PDPN-201ENST00000294489 TRAPPC6BQ86SZ2 158 aa7.96□□□□□ -1.13
PDPN-201ENST00000294489 FJX1Q86VR8 437 aa7.96□□□□□ -1.13
PDPN-201ENST00000294489 SSC4DQ8WTU2 575 aa7.96□□□□□ -1.13
PDPN-201ENST00000294489 NPRL2Q8WTW4 380 aa7.96□□□□□ -1.13
PDPN-201ENST00000294489 BOD1Q96IK1 185 aa7.96□□□□□ -1.13
PDPN-201ENST00000294489 SELENOIQ9C0D9 397 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms