RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 PCBP4P57723 403 aaKnown RBP10.66□□□□□ -0.7
SYNGAP1-201ENST00000293748 ZNF90Q03938 601 aa10.66□□□□□ -0.7
SYNGAP1-201ENST00000293748 RNF151Q2KHN1 245 aa10.66□□□□□ -0.7
SYNGAP1-201ENST00000293748 C11orf87Q6NUJ2 197 aa10.66□□□□□ -0.7
SYNGAP1-201ENST00000293748 LCN15Q6UWW0 184 aa10.66□□□□□ -0.7
SYNGAP1-201ENST00000293748 MARCH1Q8TCQ1 289 aa10.66□□□□□ -0.7
SYNGAP1-201ENST00000293748 INTS12Q96CB8 462 aaKnown RBP10.66□□□□□ -0.7
SYNGAP1-201ENST00000293748 MAP3K3Q99759 626 aa10.66□□□□□ -0.7
SYNGAP1-201ENST00000293748 SMIM7Q9BQ49 75 aa10.66□□□□□ -0.7
SYNGAP1-201ENST00000293748 RGS13O14921 159 aa10.66□□□□□ -0.7
SYNGAP1-201ENST00000293748 FCMRO60667 390 aa10.66□□□□□ -0.7
SYNGAP1-201ENST00000293748 CSF2RBP32927 897 aa10.66□□□□□ -0.7
SYNGAP1-201ENST00000293748 APOBEC1P41238 236 aaKnown RBP10.66□□□□□ -0.7
SYNGAP1-201ENST00000293748 INSM1Q01101 510 aaPredicted RBP10.66□□□□□ -0.7
SYNGAP1-201ENST00000293748 PCK2Q16822 640 aa10.66□□□□□ -0.7
SYNGAP1-201ENST00000293748 ARRDC1Q8N5I2 433 aa10.66□□□□□ -0.7
SYNGAP1-201ENST00000293748 KLHDC1Q8N7A1 406 aa10.66□□□□□ -0.7
SYNGAP1-201ENST00000293748 OR8D4Q8NGM9 314 aa10.66□□□□□ -0.7
SYNGAP1-201ENST00000293748 OR10J5Q8NHC4 309 aa10.66□□□□□ -0.7
SYNGAP1-201ENST00000293748 KCNE4Q8WWG9 221 aa10.66□□□□□ -0.7
SYNGAP1-201ENST00000293748 BARHL1Q9BZE3 327 aa10.66□□□□□ -0.7
SYNGAP1-201ENST00000293748 KLK11Q9UBX7 282 aa10.66□□□□□ -0.7
SYNGAP1-201ENST00000293748 RPH3ALQ9UNE2 315 aa10.66□□□□□ -0.7
SYNGAP1-201ENST00000293748 ZFHX2Q9C0A1 2572 aaPredicted RBP10.66□□□□□ -0.7
SYNGAP1-201ENST00000293748 SPINT2O43291 252 aa10.66□□□□□ -0.7
SYNGAP1-201ENST00000293748 SLC2A1P11166 492 aa10.66□□□□□ -0.7
SYNGAP1-201ENST00000293748 FGF7P21781 194 aa10.66□□□□□ -0.7
SYNGAP1-201ENST00000293748 ACKR1Q16570 336 aa10.66□□□□□ -0.7
SYNGAP1-201ENST00000293748 SLC35G3Q8N808 338 aa10.66□□□□□ -0.7
SYNGAP1-201ENST00000293748 LSMEM1Q8N8F7 131 aa10.66□□□□□ -0.7
SYNGAP1-201ENST00000293748 OR13D1Q8NGV5 346 aa10.66□□□□□ -0.7
SYNGAP1-201ENST00000293748 OR2G2Q8NGZ5 317 aa10.66□□□□□ -0.7
SYNGAP1-201ENST00000293748 OR51H1Q8NH63 302 aa10.66□□□□□ -0.7
SYNGAP1-201ENST00000293748 OR2AE1Q8NHA4 323 aa10.66□□□□□ -0.7
SYNGAP1-201ENST00000293748 STT3BQ8TCJ2 826 aa10.66□□□□□ -0.7
SYNGAP1-201ENST00000293748 VOPP1Q96AW1 172 aa10.66□□□□□ -0.7
SYNGAP1-201ENST00000293748 SLAMF6Q96DU3 332 aa10.66□□□□□ -0.7
SYNGAP1-201ENST00000293748 TVP23CQ96ET8 276 aa10.66□□□□□ -0.7
SYNGAP1-201ENST00000293748 ACTR3CQ9C0K3 210 aaPredicted RBP10.66□□□□□ -0.7
SYNGAP1-201ENST00000293748 MSRB2Q9Y3D2 182 aa10.66□□□□□ -0.7
SYNGAP1-201ENST00000293748 PLXND1Q9Y4D7 1925 aa10.66□□□□□ -0.7
SYNGAP1-201ENST00000293748 RNASEK-C17orf49H0YIS7 233 aa10.65□□□□□ -0.7
SYNGAP1-201ENST00000293748 SLC17A2O00624 439 aa10.65□□□□□ -0.7
SYNGAP1-201ENST00000293748 TRAF3IP2O43734 574 aaPredicted RBP10.65□□□□□ -0.7
SYNGAP1-201ENST00000293748 VAMP5O95183 116 aa10.65□□□□□ -0.7
SYNGAP1-201ENST00000293748 UCNP55089 124 aa10.65□□□□□ -0.7
SYNGAP1-201ENST00000293748 IL10RAQ13651 578 aa10.65□□□□□ -0.7
SYNGAP1-201ENST00000293748 TIGITQ495A1 244 aa10.65□□□□□ -0.7
SYNGAP1-201ENST00000293748 DERL3Q96Q80 235 aa10.65□□□□□ -0.7
SYNGAP1-201ENST00000293748 RAB33BQ9H082 229 aa10.65□□□□□ -0.7
SYNGAP1-201ENST00000293748 TMPRSS5Q9H3S3 457 aa10.65□□□□□ -0.7
SYNGAP1-201ENST00000293748 KCNG2Q9UJ96 466 aa10.65□□□□□ -0.7
SYNGAP1-201ENST00000293748 ZNF732B4DXR9 585 aa10.65□□□□□ -0.7
SYNGAP1-201ENST00000293748 C10orf142B7Z368 130 aa10.65□□□□□ -0.7
SYNGAP1-201ENST00000293748 PYCARD-AS1I3L0S3 204 aa10.65□□□□□ -0.7
SYNGAP1-201ENST00000293748 ENPP1P22413 925 aa10.65□□□□□ -0.7
SYNGAP1-201ENST00000293748 CD1CP29017 333 aa10.65□□□□□ -0.7
SYNGAP1-201ENST00000293748 HRH1P35367 487 aa10.65□□□□□ -0.7
SYNGAP1-201ENST00000293748 EEF1A2Q05639 463 aaKnown RBP10.65□□□□□ -0.7
SYNGAP1-201ENST00000293748 SLC17A1Q14916 467 aa10.65□□□□□ -0.7
SYNGAP1-201ENST00000293748 ELAVL1Q15717 326 aaKnown RBP10.65□□□□□ -0.7
SYNGAP1-201ENST00000293748 SLC25A35Q3KQZ1 300 aa10.65□□□□□ -0.7
SYNGAP1-201ENST00000293748 ELFN2Q5R3F8 820 aa10.65□□□□□ -0.7
SYNGAP1-201ENST00000293748 ZNF787Q6DD87 383 aa10.65□□□□□ -0.7
SYNGAP1-201ENST00000293748 ARHGEF39Q8N4T4 335 aa10.65□□□□□ -0.7
SYNGAP1-201ENST00000293748 SIGLECL1Q8N7X8 197 aa10.65□□□□□ -0.7
SYNGAP1-201ENST00000293748 CMTM2Q8TAZ6 248 aa10.65□□□□□ -0.7
SYNGAP1-201ENST00000293748 NOSIPQ9Y314 301 aaKnown RBP10.65□□□□□ -0.7
SYNGAP1-201ENST00000293748 B4E171 279 aa10.65□□□□□ -0.7
SYNGAP1-201ENST00000293748 G3V3Q6 166 aa10.65□□□□□ -0.7
SYNGAP1-201ENST00000293748 TSPAN12O95859 305 aa10.65□□□□□ -0.7
SYNGAP1-201ENST00000293748 NQO2P16083 231 aa10.65□□□□□ -0.7
SYNGAP1-201ENST00000293748 TSPAN7P41732 249 aa10.65□□□□□ -0.7
SYNGAP1-201ENST00000293748 PJVKQ0ZLH3 352 aa10.65□□□□□ -0.7
SYNGAP1-201ENST00000293748 IL11RAQ14626 422 aa10.65□□□□□ -0.7
SYNGAP1-201ENST00000293748 TMEM128Q5BJH2 165 aa10.65□□□□□ -0.7
SYNGAP1-201ENST00000293748 MARCH3Q86UD3 253 aa10.65□□□□□ -0.7
SYNGAP1-201ENST00000293748 KDF1Q8NAX2 398 aaPredicted RBP10.65□□□□□ -0.7
SYNGAP1-201ENST00000293748 RXFP4Q8TDU9 374 aa10.65□□□□□ -0.7
SYNGAP1-201ENST00000293748 OR6C1Q96RD1 312 aa10.65□□□□□ -0.7
SYNGAP1-201ENST00000293748 SIGLEC11Q96RL6 698 aa10.65□□□□□ -0.7
SYNGAP1-201ENST00000293748 PIGQQ9BRB3 760 aa10.65□□□□□ -0.7
SYNGAP1-201ENST00000293748 PLA2G12AQ9BZM1 189 aa10.65□□□□□ -0.7
SYNGAP1-201ENST00000293748 OPA3Q9H6K4 179 aa10.65□□□□□ -0.7
SYNGAP1-201ENST00000293748 ISG20L2Q9H9L3 353 aaKnown RBP10.65□□□□□ -0.7
SYNGAP1-201ENST00000293748 FGF21Q9NSA1 209 aa10.65□□□□□ -0.7
SYNGAP1-201ENST00000293748 KCND3Q9UK17 655 aa10.65□□□□□ -0.7
SYNGAP1-201ENST00000293748 CACNA1EQ15878 2313 aa10.65□□□□□ -0.7
SYNGAP1-201ENST00000293748 A0A087WV62 115 aa10.65□□□□□ -0.71
SYNGAP1-201ENST00000293748 GPR31O00270 319 aa10.65□□□□□ -0.71
SYNGAP1-201ENST00000293748 GLSO94925 669 aaPredicted RBP10.65□□□□□ -0.71
SYNGAP1-201ENST00000293748 GLAP06280 429 aa10.65□□□□□ -0.71
SYNGAP1-201ENST00000293748 OR5H8P0DN80 308 aa10.65□□□□□ -0.71
SYNGAP1-201ENST00000293748 CD22P20273 847 aa10.65□□□□□ -0.71
SYNGAP1-201ENST00000293748 RAB5AP20339 215 aa10.65□□□□□ -0.71
SYNGAP1-201ENST00000293748 H2BFWTQ7Z2G1 175 aa10.65□□□□□ -0.71
SYNGAP1-201ENST00000293748 SPICQ8N5J4 248 aa10.65□□□□□ -0.71
SYNGAP1-201ENST00000293748 OR5M1Q8NGP8 315 aa10.65□□□□□ -0.71
SYNGAP1-201ENST00000293748 OR51E1Q8TCB6 317 aa10.65□□□□□ -0.71
SYNGAP1-201ENST00000293748 PHYHIPLQ96FC7 376 aa10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms