RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 GPR18Q14330 331 aa8.2□□□□□ -1.1
PDGFC-201ENST00000274071 H1FOOQ8IZA3 346 aaPredicted RBP8.2□□□□□ -1.1
PDGFC-201ENST00000274071 GJD3Q8N144 294 aa8.2□□□□□ -1.1
PDGFC-201ENST00000274071 OR2D3Q8NGH3 330 aa8.2□□□□□ -1.1
PDGFC-201ENST00000274071 OR2V1Q8NHB1 315 aa8.2□□□□□ -1.1
PDGFC-201ENST00000274071 RPS4Y2Q8TD47 263 aa8.2□□□□□ -1.1
PDGFC-201ENST00000274071 ERGIC1Q969X5 290 aa8.2□□□□□ -1.1
PDGFC-201ENST00000274071 FAM3DQ96BQ1 224 aa8.2□□□□□ -1.1
PDGFC-201ENST00000274071 Q96M85 177 aa8.2□□□□□ -1.1
PDGFC-201ENST00000274071 LGR4Q9BXB1 951 aa8.2□□□□□ -1.1
PDGFC-201ENST00000274071 CFHR5Q9BXR6 569 aa8.2□□□□□ -1.1
PDGFC-201ENST00000274071 SLCO5A1Q9H2Y9 848 aa8.2□□□□□ -1.1
PDGFC-201ENST00000274071 PAM16Q9Y3D7 125 aa8.2□□□□□ -1.1
PDGFC-201ENST00000274071 LOC100289279A0A1B0GTE1 492 aa8.2□□□□□ -1.1
PDGFC-201ENST00000274071 RIIAD1A6NNX1 92 aa8.2□□□□□ -1.1
PDGFC-201ENST00000274071 B4DEV8 164 aa8.2□□□□□ -1.1
PDGFC-201ENST00000274071 CDC40O60508 579 aaKnown RBP eCLIP8.2□□□□□ -1.1
PDGFC-201ENST00000274071 TBX18O95935 607 aa8.2□□□□□ -1.1
PDGFC-201ENST00000274071 ARF5P84085 180 aa8.2□□□□□ -1.1
PDGFC-201ENST00000274071 FBLN7Q53RD9 439 aa8.2□□□□□ -1.1
PDGFC-201ENST00000274071 FAM78AQ5JUQ0 283 aa8.2□□□□□ -1.1
PDGFC-201ENST00000274071 PRSS57Q6UWY2 283 aa8.2□□□□□ -1.1
PDGFC-201ENST00000274071 CFAP52Q8N1V2 620 aa8.2□□□□□ -1.1
PDGFC-201ENST00000274071 COX18Q8N8Q8 333 aa8.2□□□□□ -1.1
PDGFC-201ENST00000274071 FAM174AQ8TBP5 190 aa8.2□□□□□ -1.1
PDGFC-201ENST00000274071 GPR119Q8TDV5 335 aa8.2□□□□□ -1.1
PDGFC-201ENST00000274071 ABHD3Q8WU67 409 aa8.2□□□□□ -1.1
PDGFC-201ENST00000274071 TMEM56Q96MV1 263 aa8.2□□□□□ -1.1
PDGFC-201ENST00000274071 IL17FQ96PD4 163 aa8.2□□□□□ -1.1
PDGFC-201ENST00000274071 SH3BGRL3Q9H299 93 aa8.2□□□□□ -1.1
PDGFC-201ENST00000274071 C20orf141Q9NUB4 165 aa8.2□□□□□ -1.1
PDGFC-201ENST00000274071 HSPB7Q9UBY9 170 aa8.2□□□□□ -1.1
PDGFC-201ENST00000274071 TMEM56-RWDD3S4R434 201 aa8.2□□□□□ -1.1
PDGFC-201ENST00000274071 NPIPA2E9PIF3 369 aa8.19□□□□□ -1.1
PDGFC-201ENST00000274071 H3BSH0 61 aa8.19□□□□□ -1.1
PDGFC-201ENST00000274071 CD160O95971 181 aa8.19□□□□□ -1.1
PDGFC-201ENST00000274071 FBXO45P0C2W1 286 aa8.19□□□□□ -1.1
PDGFC-201ENST00000274071 ZNF708P17019 499 aa8.19□□□□□ -1.1
PDGFC-201ENST00000274071 ID2Q02363 134 aa8.19□□□□□ -1.1
PDGFC-201ENST00000274071 RUNX2Q13950 521 aa8.19□□□□□ -1.1
PDGFC-201ENST00000274071 ZNF260Q3ZCT1 412 aa8.19□□□□□ -1.1
PDGFC-201ENST00000274071 CTXN3Q4LDR2 81 aa8.19□□□□□ -1.1
PDGFC-201ENST00000274071 WDR73Q6P4I2 378 aa8.19□□□□□ -1.1
PDGFC-201ENST00000274071 SPRED2Q7Z698 418 aa8.19□□□□□ -1.1
PDGFC-201ENST00000274071 SLC35F2Q8IXU6 374 aa8.19□□□□□ -1.1
PDGFC-201ENST00000274071 POC1AQ8NBT0 407 aa8.19□□□□□ -1.1
PDGFC-201ENST00000274071 ZNF738Q8NE65 137 aa8.19□□□□□ -1.1
PDGFC-201ENST00000274071 OR5D18Q8NGL1 313 aa8.19□□□□□ -1.1
PDGFC-201ENST00000274071 SUN3Q8TAQ9 357 aa8.19□□□□□ -1.1
PDGFC-201ENST00000274071 RNF128Q8TEB7 428 aa8.19□□□□□ -1.1
PDGFC-201ENST00000274071 RPUSD4Q96CM3 377 aaKnown RBP8.19□□□□□ -1.1
PDGFC-201ENST00000274071 C2orf50Q96LR7 162 aa8.19□□□□□ -1.1
PDGFC-201ENST00000274071 ARHGDIGQ99819 225 aa8.19□□□□□ -1.1
PDGFC-201ENST00000274071 NEUROD4Q9HD90 331 aa8.19□□□□□ -1.1
PDGFC-201ENST00000274071 COX11Q9Y6N1 276 aa8.19□□□□□ -1.1
PDGFC-201ENST00000274071 TET1Q8NFU7 2136 aa8.19□□□□□ -1.1
PDGFC-201ENST00000274071 TICRRQ7Z2Z1 1910 aa8.19□□□□□ -1.1
PDGFC-201ENST00000274071 LOC102724200A0A096LPH7 203 aaPredicted RBP8.19□□□□□ -1.1
PDGFC-201ENST00000274071 FITM1A5D6W6 292 aa8.19□□□□□ -1.1
PDGFC-201ENST00000274071 CTSVO60911 334 aa8.19□□□□□ -1.1
PDGFC-201ENST00000274071 CHRM2P08172 466 aa8.19□□□□□ -1.1
PDGFC-201ENST00000274071 IRF1P10914 325 aa8.19□□□□□ -1.1
PDGFC-201ENST00000274071 RPL4P36578 427 aaKnown RBP8.19□□□□□ -1.1
PDGFC-201ENST00000274071 HIST1H3AP68431 136 aa8.19□□□□□ -1.1
PDGFC-201ENST00000274071 DPY19L2P2Q6ZN68 376 aa8.19□□□□□ -1.1
PDGFC-201ENST00000274071 MDGA2Q7Z553 956 aa8.19□□□□□ -1.1
PDGFC-201ENST00000274071 ZNF584Q8IVC4 421 aa8.19□□□□□ -1.1
PDGFC-201ENST00000274071 FAM213BQ8TBF2 198 aa8.19□□□□□ -1.1
PDGFC-201ENST00000274071 MARCH1Q8TCQ1 289 aa8.19□□□□□ -1.1
PDGFC-201ENST00000274071 TMEM37Q8WXS4 190 aa8.19□□□□□ -1.1
PDGFC-201ENST00000274071 ZCCHC14Q8WYQ9 949 aaKnown RBP8.19□□□□□ -1.1
PDGFC-201ENST00000274071 MCHR2Q969V1 340 aa8.19□□□□□ -1.1
PDGFC-201ENST00000274071 BPIFA2Q96DR5 249 aa8.19□□□□□ -1.1
PDGFC-201ENST00000274071 MCHR1Q99705 422 aa8.19□□□□□ -1.1
PDGFC-201ENST00000274071 ZNF700Q9H0M5 742 aa8.19□□□□□ -1.1
PDGFC-201ENST00000274071 ZNF581Q9P0T4 197 aa8.19□□□□□ -1.1
PDGFC-201ENST00000274071 ZNF107Q9UII5 783 aaPredicted RBP8.19□□□□□ -1.1
PDGFC-201ENST00000274071 SLC13A4Q9UKG4 626 aa8.19□□□□□ -1.1
PDGFC-201ENST00000274071 ICAM5Q9UMF0 924 aa8.19□□□□□ -1.1
PDGFC-201ENST00000274071 RCL1Q9Y2P8 373 aaKnown RBP8.19□□□□□ -1.1
PDGFC-201ENST00000274071 STRAPQ9Y3F4 350 aaKnown RBP8.19□□□□□ -1.1
PDGFC-201ENST00000274071 LIPGQ9Y5X9 500 aa8.19□□□□□ -1.1
PDGFC-201ENST00000274071 VWA8A3KMH1 1905 aa8.19□□□□□ -1.1
PDGFC-201ENST00000274071 YPEL1O60688 119 aa8.19□□□□□ -1.1
PDGFC-201ENST00000274071 TRAPPC6AO75865 159 aa8.19□□□□□ -1.1
PDGFC-201ENST00000274071 SOD2P04179 222 aa8.19□□□□□ -1.1
PDGFC-201ENST00000274071 HSD11B1P28845 292 aa8.19□□□□□ -1.1
PDGFC-201ENST00000274071 MESP2Q0VG99 397 aa8.19□□□□□ -1.1
PDGFC-201ENST00000274071 ENDOGQ14249 297 aaKnown RBP8.19□□□□□ -1.1
PDGFC-201ENST00000274071 PRSS8Q16651 343 aa8.19□□□□□ -1.1
PDGFC-201ENST00000274071 SLC22A6Q4U2R8 563 aa8.19□□□□□ -1.1
PDGFC-201ENST00000274071 TMEM128Q5BJH2 165 aa8.19□□□□□ -1.1
PDGFC-201ENST00000274071 OR4C11Q6IEV9 310 aa8.19□□□□□ -1.1
PDGFC-201ENST00000274071 AGTRAPQ6RW13 159 aa8.19□□□□□ -1.1
PDGFC-201ENST00000274071 CLEC18BQ6UXF7 455 aa8.19□□□□□ -1.1
PDGFC-201ENST00000274071 TOMM20LQ6UXN7 152 aa8.19□□□□□ -1.1
PDGFC-201ENST00000274071 TEX43Q6ZNM6 134 aa8.19□□□□□ -1.1
PDGFC-201ENST00000274071 ARL14EPQ8N8R7 260 aaPredicted RBP8.19□□□□□ -1.1
PDGFC-201ENST00000274071 LINC01555Q8NAE3 123 aa8.19□□□□□ -1.1
PDGFC-201ENST00000274071 CCDC74AQ96AQ1 378 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms