RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 OR1L3Q8NH93 324 aa24.29■■□□□ 1.48
CBX4-201ENST00000269397 ZNF304Q9HCX3 659 aa24.29■■□□□ 1.48
CBX4-201ENST00000269397 PLA2G2EQ9NZK7 142 aa24.29■■□□□ 1.48
CBX4-201ENST00000269397 GIMD1P0DJR0 217 aa24.29■■□□□ 1.48
CBX4-201ENST00000269397 PTGFRP43088 359 aa24.29■■□□□ 1.48
CBX4-201ENST00000269397 TMEM234Q8WY98 164 aa24.29■■□□□ 1.48
CBX4-201ENST00000269397 C2orf50Q96LR7 162 aa24.29■■□□□ 1.48
CBX4-201ENST00000269397 SMIM3Q9BZL3 60 aa24.29■■□□□ 1.48
CBX4-201ENST00000269397 GPR27Q9NS67 375 aa24.29■■□□□ 1.48
CBX4-201ENST00000269397 EHFQ9NZC4 300 aa24.29■■□□□ 1.48
CBX4-201ENST00000269397 MMP17Q9ULZ9 603 aa24.29■■□□□ 1.48
CBX4-201ENST00000269397 SRPK3Q9UPE1 567 aa24.29■■□□□ 1.48
CBX4-201ENST00000269397 FER1L5A0AVI2 2057 aa24.29■■□□□ 1.48
CBX4-201ENST00000269397 PQLC2LA1A4F0 135 aa24.28■■□□□ 1.48
CBX4-201ENST00000269397 COLCA2A8K830 154 aa24.28■■□□□ 1.48
CBX4-201ENST00000269397 GSTP1P09211 210 aaKnown RBP24.28■■□□□ 1.48
CBX4-201ENST00000269397 FBLP22087 321 aaKnown RBP24.28■■□□□ 1.48
CBX4-201ENST00000269397 FPR2P25090 351 aa24.28■■□□□ 1.48
CBX4-201ENST00000269397 P2RY4P51582 365 aa24.28■■□□□ 1.48
CBX4-201ENST00000269397 CSNK2A1P68400 391 aaPredicted RBP24.28■■□□□ 1.48
CBX4-201ENST00000269397 FOXF1Q12946 379 aa24.28■■□□□ 1.48
CBX4-201ENST00000269397 SWI5Q1ZZU3 235 aa24.28■■□□□ 1.48
CBX4-201ENST00000269397 POC1AQ8NBT0 407 aa24.28■■□□□ 1.48
CBX4-201ENST00000269397 CSNK2A3Q8NEV1 391 aa24.28■■□□□ 1.48
CBX4-201ENST00000269397 KCNG3Q8TAE7 436 aa24.28■■□□□ 1.48
CBX4-201ENST00000269397 H3BMH7 237 aa24.28■■□□□ 1.48
CBX4-201ENST00000269397 F2RL1P55085 397 aa24.28■■□□□ 1.48
CBX4-201ENST00000269397 ZNF121P58317 390 aaPredicted RBP24.28■■□□□ 1.48
CBX4-201ENST00000269397 MFSD8Q8NHS3 518 aa24.28■■□□□ 1.48
CBX4-201ENST00000269397 SERINC1Q9NRX5 453 aa24.28■■□□□ 1.48
CBX4-201ENST00000269397 WIF1Q9Y5W5 379 aa24.28■■□□□ 1.48
CBX4-201ENST00000269397 RER1O15258 196 aa24.28■■□□□ 1.48
CBX4-201ENST00000269397 LYL1P12980 280 aa24.28■■□□□ 1.48
CBX4-201ENST00000269397 ZNF17P17021 662 aa24.28■■□□□ 1.48
CBX4-201ENST00000269397 ARL4DP49703 201 aa24.28■■□□□ 1.48
CBX4-201ENST00000269397 ZP4Q12836 540 aa24.28■■□□□ 1.48
CBX4-201ENST00000269397 ZNF441Q8N8Z8 693 aa24.28■■□□□ 1.48
CBX4-201ENST00000269397 AKR1E2Q96JD6 320 aa24.28■■□□□ 1.48
CBX4-201ENST00000269397 A0A1W2PPC4 97 aa24.27■■□□□ 1.48
CBX4-201ENST00000269397 PMS2P1A4D2B8 440 aa24.27■■□□□ 1.48
CBX4-201ENST00000269397 LAP3P28838 519 aa24.27■■□□□ 1.48
CBX4-201ENST00000269397 SNU13P55769 128 aaKnown RBP24.27■■□□□ 1.48
CBX4-201ENST00000269397 DHRS11Q6UWP2 260 aa24.27■■□□□ 1.48
CBX4-201ENST00000269397 C1QL2Q7Z5L3 287 aa24.27■■□□□ 1.48
CBX4-201ENST00000269397 SULT4A1Q9BR01 284 aa24.27■■□□□ 1.48
CBX4-201ENST00000269397 ASH2LQ9UBL3 628 aa24.27■■□□□ 1.48
CBX4-201ENST00000269397 FBLN5Q9UBX5 448 aa24.27■■□□□ 1.48
CBX4-201ENST00000269397 CLEC9AQ6UXN8 241 aa24.27■■□□□ 1.48
CBX4-201ENST00000269397 DMBX1Q8NFW5 382 aa24.27■■□□□ 1.48
CBX4-201ENST00000269397 CLCC1Q96S66 551 aa24.27■■□□□ 1.48
CBX4-201ENST00000269397 CLEC1BQ9P126 229 aa24.27■■□□□ 1.48
CBX4-201ENST00000269397 C5orf63A6NC05 138 aa24.26■■□□□ 1.47
CBX4-201ENST00000269397 MFNGO00587 321 aa24.26■■□□□ 1.47
CBX4-201ENST00000269397 APOC1P02654 83 aa24.26■■□□□ 1.47
CBX4-201ENST00000269397 CCR5P51681 352 aa24.26■■□□□ 1.47
CBX4-201ENST00000269397 FAM76BQ5HYJ3 339 aa24.26■■□□□ 1.47
CBX4-201ENST00000269397 PEG10Q86TG7 708 aaKnown RBP24.26■■□□□ 1.47
CBX4-201ENST00000269397 OR51T1Q8NGJ9 327 aa24.26■■□□□ 1.47
CBX4-201ENST00000269397 FBXO17Q96EF6 278 aa24.26■■□□□ 1.47
CBX4-201ENST00000269397 SAT2Q96F10 170 aaPredicted RBP24.26■■□□□ 1.47
CBX4-201ENST00000269397 C14orf79Q96F83 325 aa24.26■■□□□ 1.47
CBX4-201ENST00000269397 WDFY3Q8IZQ1 3526 aa24.26■■□□□ 1.47
CBX4-201ENST00000269397 PRSS44E7EML9 344 aa24.26■■□□□ 1.47
CBX4-201ENST00000269397 HEXAP06865 529 aa24.26■■□□□ 1.47
CBX4-201ENST00000269397 RPS2P15880 293 aaKnown RBP24.26■■□□□ 1.47
CBX4-201ENST00000269397 HABP2Q14520 560 aaPredicted RBP24.26■■□□□ 1.47
CBX4-201ENST00000269397 TGIF1Q15583 401 aa24.26■■□□□ 1.47
CBX4-201ENST00000269397 CDCA3Q99618 268 aaPredicted RBP24.26■■□□□ 1.47
CBX4-201ENST00000269397 TPSD1Q9BZJ3 242 aa24.26■■□□□ 1.47
CBX4-201ENST00000269397 ANAPC10Q9UM13 185 aa24.26■■□□□ 1.47
CBX4-201ENST00000269397 LILRA5A6NI73 299 aa24.25■■□□□ 1.47
CBX4-201ENST00000269397 EFNA2O43921 213 aa24.25■■□□□ 1.47
CBX4-201ENST00000269397 ACAA1P09110 424 aaPredicted RBP24.25■■□□□ 1.47
CBX4-201ENST00000269397 OR8U9P0C7N5 309 aa24.25■■□□□ 1.47
CBX4-201ENST00000269397 HKR1P10072 659 aa24.25■■□□□ 1.47
CBX4-201ENST00000269397 GPR85P60893 370 aa24.25■■□□□ 1.47
CBX4-201ENST00000269397 SPEM2Q0P670 501 aa24.25■■□□□ 1.47
CBX4-201ENST00000269397 FAM57BQ71RH2 274 aa24.25■■□□□ 1.47
CBX4-201ENST00000269397 OR2AJ1Q8NGZ0 328 aa24.25■■□□□ 1.47
CBX4-201ENST00000269397 OR8U1Q8NH10 309 aa24.25■■□□□ 1.47
CBX4-201ENST00000269397 NUDT16L1Q9BRJ7 211 aaKnown RBP24.25■■□□□ 1.47
CBX4-201ENST00000269397 B3GAT1Q9P2W7 334 aa24.25■■□□□ 1.47
CBX4-201ENST00000269397 CEACAM18A8MTB9 384 aa24.25■■□□□ 1.47
CBX4-201ENST00000269397 C5orf46Q6UWT4 87 aa24.25■■□□□ 1.47
CBX4-201ENST00000269397 RBMS3Q6XE24 437 aaKnown RBP24.25■■□□□ 1.47
CBX4-201ENST00000269397 Q7L0L9 218 aa24.25■■□□□ 1.47
CBX4-201ENST00000269397 SECTM1Q8WVN6 248 aa24.25■■□□□ 1.47
CBX4-201ENST00000269397 NECAB3Q96P71 396 aaPredicted RBP24.25■■□□□ 1.47
CBX4-201ENST00000269397 OCSTAMPQ9BR26 566 aa24.25■■□□□ 1.47
CBX4-201ENST00000269397 EDARQ9UNE0 448 aa24.25■■□□□ 1.47
CBX4-201ENST00000269397 OSGIN2Q9Y236 505 aa24.25■■□□□ 1.47
CBX4-201ENST00000269397 IGKV1-9A0A0C4DH69 117 aa24.24■■□□□ 1.47
CBX4-201ENST00000269397 C10orf142B7Z368 130 aa24.24■■□□□ 1.47
CBX4-201ENST00000269397 FCGR3AP08637 254 aa24.24■■□□□ 1.47
CBX4-201ENST00000269397 FOLR1P15328 257 aa24.24■■□□□ 1.47
CBX4-201ENST00000269397 CLRN1P58418 232 aa24.24■■□□□ 1.47
CBX4-201ENST00000269397 RNF4P78317 190 aa24.24■■□□□ 1.47
CBX4-201ENST00000269397 LHFPL1Q86WI0 220 aa24.24■■□□□ 1.47
CBX4-201ENST00000269397 NANPQ8TBE9 248 aa24.24■■□□□ 1.47
CBX4-201ENST00000269397 LIN37Q96GY3 246 aaPredicted RBP24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms