RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 NXF5Q9H1B4 397 aaKnown RBP10.98□□□□□ -0.65
CHMP2B-201ENST00000263780 BCO1Q9HAY6 547 aa10.98□□□□□ -0.65
CHMP2B-201ENST00000263780 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.98□□□□□ -0.65
CHMP2B-201ENST00000263780 CREBZFQ9NS37 354 aa10.98□□□□□ -0.65
CHMP2B-201ENST00000263780 GAR1Q9NY12 217 aaKnown RBP10.98□□□□□ -0.65
CHMP2B-201ENST00000263780 PRR13Q9NZ81 148 aa10.98□□□□□ -0.65
CHMP2B-201ENST00000263780 MPDZO75970 2070 aa10.98□□□□□ -0.65
CHMP2B-201ENST00000263780 KIR2DS5A0A0G2JLQ3 304 aa10.98□□□□□ -0.65
CHMP2B-201ENST00000263780 A0A0G2JNG1 304 aa10.98□□□□□ -0.65
CHMP2B-201ENST00000263780 NPIPA5E9PKD4 350 aa10.98□□□□□ -0.65
CHMP2B-201ENST00000263780 KIR2DS3K7RE56 304 aa10.98□□□□□ -0.65
CHMP2B-201ENST00000263780 SOX1O00570 391 aaPredicted RBP10.98□□□□□ -0.65
CHMP2B-201ENST00000263780 SOCS1O15524 211 aa10.98□□□□□ -0.65
CHMP2B-201ENST00000263780 NPIPB7O75200 414 aa10.98□□□□□ -0.65
CHMP2B-201ENST00000263780 ARG1P05089 322 aa10.98□□□□□ -0.65
CHMP2B-201ENST00000263780 IL12BP29460 328 aa10.98□□□□□ -0.65
CHMP2B-201ENST00000263780 SLC35A1P78382 337 aa10.98□□□□□ -0.65
CHMP2B-201ENST00000263780 TDGQ13569 410 aa10.98□□□□□ -0.65
CHMP2B-201ENST00000263780 KIR2DS5Q14953 304 aa10.98□□□□□ -0.65
CHMP2B-201ENST00000263780 PPA1Q15181 289 aa10.98□□□□□ -0.65
CHMP2B-201ENST00000263780 PLAC9Q5JTB6 97 aa10.98□□□□□ -0.65
CHMP2B-201ENST00000263780 NCMAPQ5T1S8 102 aa10.98□□□□□ -0.65
CHMP2B-201ENST00000263780 LINC00346Q8IVM7 164 aa10.98□□□□□ -0.65
CHMP2B-201ENST00000263780 YAF2Q8IY57 180 aa10.98□□□□□ -0.65
CHMP2B-201ENST00000263780 GINS3Q9BRX5 216 aa10.98□□□□□ -0.65
CHMP2B-201ENST00000263780 C20orf24Q9BUV8 137 aa10.98□□□□□ -0.65
CHMP2B-201ENST00000263780 SCRT1Q9BWW7 348 aa10.98□□□□□ -0.65
CHMP2B-201ENST00000263780 FAM60AQ9NP50 221 aa10.98□□□□□ -0.65
CHMP2B-201ENST00000263780 GFOD1Q9NXC2 390 aa10.98□□□□□ -0.65
CHMP2B-201ENST00000263780 EHFQ9NZC4 300 aa10.98□□□□□ -0.65
CHMP2B-201ENST00000263780 NPIPA1Q9UND3 350 aa10.98□□□□□ -0.65
CHMP2B-201ENST00000263780 AMDHD2Q9Y303 409 aa10.98□□□□□ -0.65
CHMP2B-201ENST00000263780 NME2P1O60361 137 aa10.97□□□□□ -0.65
CHMP2B-201ENST00000263780 NDUFS6O75380 124 aaKnown RBP10.97□□□□□ -0.65
CHMP2B-201ENST00000263780 F10P00742 488 aa10.97□□□□□ -0.65
CHMP2B-201ENST00000263780 PRH1P02810 166 aa10.97□□□□□ -0.65
CHMP2B-201ENST00000263780 ACRP10323 421 aa10.97□□□□□ -0.65
CHMP2B-201ENST00000263780 DAOP14920 347 aa10.97□□□□□ -0.65
CHMP2B-201ENST00000263780 NME1P15531 152 aaKnown RBP10.97□□□□□ -0.65
CHMP2B-201ENST00000263780 FCARP24071 287 aa10.97□□□□□ -0.65
CHMP2B-201ENST00000263780 SNU13P55769 128 aaKnown RBP10.97□□□□□ -0.65
CHMP2B-201ENST00000263780 SLC37A1P57057 533 aa10.97□□□□□ -0.65
CHMP2B-201ENST00000263780 FOXK1P85037 733 aa10.97□□□□□ -0.65
CHMP2B-201ENST00000263780 ZP4Q12836 540 aa10.97□□□□□ -0.65
CHMP2B-201ENST00000263780 TGIF1Q15583 401 aa10.97□□□□□ -0.65
CHMP2B-201ENST00000263780 DEFB110Q30KQ9 67 aa10.97□□□□□ -0.65
CHMP2B-201ENST00000263780 Q3ZCU0 254 aa10.97□□□□□ -0.65
CHMP2B-201ENST00000263780 CHRFAM7AQ494W8 412 aa10.97□□□□□ -0.65
CHMP2B-201ENST00000263780 SOHLH1Q5JUK2 328 aa10.97□□□□□ -0.65
CHMP2B-201ENST00000263780 C19orf47Q8N9M1 422 aaKnown RBP10.97□□□□□ -0.65
CHMP2B-201ENST00000263780 MAFIPQ8WZ33 124 aa10.97□□□□□ -0.65
CHMP2B-201ENST00000263780 ST6GALNAC5Q9BVH7 336 aa10.97□□□□□ -0.65
CHMP2B-201ENST00000263780 CFHR5Q9BXR6 569 aa10.97□□□□□ -0.65
CHMP2B-201ENST00000263780 TBL1XR1Q9BZK7 514 aa10.97□□□□□ -0.65
CHMP2B-201ENST00000263780 A0A0A6YYD4 124 aa10.97□□□□□ -0.65
CHMP2B-201ENST00000263780 NPIPB13A6NJU9 1138 aa10.97□□□□□ -0.65
CHMP2B-201ENST00000263780 SEC14L6B5MCN3 397 aa10.97□□□□□ -0.65
CHMP2B-201ENST00000263780 NPIPB4C9JG80 1138 aa10.97□□□□□ -0.65
CHMP2B-201ENST00000263780 ITGA3P26006 1051 aa10.97□□□□□ -0.65
CHMP2B-201ENST00000263780 GPX4P36969 197 aaPredicted RBP10.97□□□□□ -0.65
CHMP2B-201ENST00000263780 RPS10P46783 165 aaKnown RBP10.97□□□□□ -0.65
CHMP2B-201ENST00000263780 P2RY1P47900 373 aa10.97□□□□□ -0.65
CHMP2B-201ENST00000263780 ZNF84P51523 738 aa10.97□□□□□ -0.65
CHMP2B-201ENST00000263780 SPEM2Q0P670 501 aa10.97□□□□□ -0.65
CHMP2B-201ENST00000263780 ZNF239Q16600 458 aaKnown RBP10.97□□□□□ -0.65
CHMP2B-201ENST00000263780 GRINAQ7Z429 371 aa10.97□□□□□ -0.65
CHMP2B-201ENST00000263780 STX12Q86Y82 276 aa10.97□□□□□ -0.65
CHMP2B-201ENST00000263780 LRRC18Q8N456 261 aa10.97□□□□□ -0.65
CHMP2B-201ENST00000263780 SUMF2Q8NBJ7 301 aa10.97□□□□□ -0.65
CHMP2B-201ENST00000263780 SLAMF6Q96DU3 332 aa10.97□□□□□ -0.65
CHMP2B-201ENST00000263780 WDR77Q9BQA1 342 aaPredicted RBP10.97□□□□□ -0.65
CHMP2B-201ENST00000263780 OR11A1Q9GZK7 315 aa10.97□□□□□ -0.65
CHMP2B-201ENST00000263780 CHST5Q9GZS9 411 aa10.97□□□□□ -0.65
CHMP2B-201ENST00000263780 OR10A2Q9H208 303 aa10.97□□□□□ -0.65
CHMP2B-201ENST00000263780 C8orf33Q9H7E9 229 aaPredicted RBP10.97□□□□□ -0.65
CHMP2B-201ENST00000263780 A0A1W2PPE2 198 aa10.96□□□□□ -0.65
CHMP2B-201ENST00000263780 ALG1L2C9J202 215 aa10.96□□□□□ -0.65
CHMP2B-201ENST00000263780 GPR137BO60478 399 aa10.96□□□□□ -0.65
CHMP2B-201ENST00000263780 FKTNO75072 461 aa10.96□□□□□ -0.65
CHMP2B-201ENST00000263780 KNG1P01042 644 aa10.96□□□□□ -0.65
CHMP2B-201ENST00000263780 TNFRSF4P43489 277 aa10.96□□□□□ -0.65
CHMP2B-201ENST00000263780 TMEM50BP56557 158 aa10.96□□□□□ -0.65
CHMP2B-201ENST00000263780 YPEL5P62699 121 aa10.96□□□□□ -0.65
CHMP2B-201ENST00000263780 EIF3IQ13347 325 aaKnown RBP10.96□□□□□ -0.65
CHMP2B-201ENST00000263780 C14orf28Q4W4Y0 310 aa10.96□□□□□ -0.65
CHMP2B-201ENST00000263780 FAM219AQ8IW50 185 aa10.96□□□□□ -0.65
CHMP2B-201ENST00000263780 SULF2Q8IWU5 870 aa10.96□□□□□ -0.65
CHMP2B-201ENST00000263780 SMIM3Q9BZL3 60 aa10.96□□□□□ -0.65
CHMP2B-201ENST00000263780 HDGFL3Q9Y3E1 203 aa10.96□□□□□ -0.65
CHMP2B-201ENST00000263780 LSM5Q9Y4Y9 91 aaKnown RBP10.96□□□□□ -0.65
CHMP2B-201ENST00000263780 TMEM184BQ9Y519 407 aaPredicted RBP10.96□□□□□ -0.65
CHMP2B-201ENST00000263780 GMFGO60234 142 aa10.96□□□□□ -0.66
CHMP2B-201ENST00000263780 CA11O75493 328 aa10.96□□□□□ -0.66
CHMP2B-201ENST00000263780 CRTAPO75718 401 aaPredicted RBP10.96□□□□□ -0.66
CHMP2B-201ENST00000263780 TNFP01375 233 aa10.96□□□□□ -0.66
CHMP2B-201ENST00000263780 CTSDP07339 412 aaPredicted RBP10.96□□□□□ -0.66
CHMP2B-201ENST00000263780 C9orf152Q5JTZ5 239 aa10.96□□□□□ -0.66
CHMP2B-201ENST00000263780 SLC25A43Q8WUT9 341 aaPredicted RBP10.96□□□□□ -0.66
CHMP2B-201ENST00000263780 ASB10Q8WXI3 467 aa10.96□□□□□ -0.66
CHMP2B-201ENST00000263780 DNAJA3Q96EY1 480 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms