RNA–Protein interactions for RNA: ENST00000260383.11

TUBGCP4-201, Transcript of tubulin gamma complex associated protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TUBGCP4, Length 2,617 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-201ENST00000260383 PSG6Q00889 435 aa11.8□□□□□ -0.52
TUBGCP4-201ENST00000260383 NNATQ16517 81 aa11.8□□□□□ -0.52
TUBGCP4-201ENST00000260383 COL13A1Q5TAT6 717 aaPredicted RBP11.8□□□□□ -0.52
TUBGCP4-201ENST00000260383 ZNF765Q7L2R6 523 aa11.8□□□□□ -0.52
TUBGCP4-201ENST00000260383 PRSS41Q7RTY9 318 aa11.8□□□□□ -0.52
TUBGCP4-201ENST00000260383 PEG10Q86TG7 708 aaKnown RBP11.8□□□□□ -0.52
TUBGCP4-201ENST00000260383 NPAS4Q8IUM7 802 aa11.8□□□□□ -0.52
TUBGCP4-201ENST00000260383 OR52R1Q8NGF1 315 aa11.8□□□□□ -0.52
TUBGCP4-201ENST00000260383 DTD1Q8TEA8 209 aa11.8□□□□□ -0.52
TUBGCP4-201ENST00000260383 WFIKKN2Q8TEU8 576 aa11.8□□□□□ -0.52
TUBGCP4-201ENST00000260383 GINS3Q9BRX5 216 aa11.8□□□□□ -0.52
TUBGCP4-201ENST00000260383 IL17BQ9UHF5 180 aa11.8□□□□□ -0.52
TUBGCP4-201ENST00000260383 MEMO1Q9Y316 297 aa11.8□□□□□ -0.52
TUBGCP4-201ENST00000260383 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.79□□□□□ -0.52
TUBGCP4-201ENST00000260383 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.79□□□□□ -0.52
TUBGCP4-201ENST00000260383 RBFOX3A6NFN3 312 aa11.79□□□□□ -0.52
TUBGCP4-201ENST00000260383 FPR2P25090 351 aa11.79□□□□□ -0.52
TUBGCP4-201ENST00000260383 GLIPR1P48060 266 aa11.79□□□□□ -0.52
TUBGCP4-201ENST00000260383 ASCL1P50553 236 aa11.79□□□□□ -0.52
TUBGCP4-201ENST00000260383 TDGF1P3P51864 188 aa11.79□□□□□ -0.52
TUBGCP4-201ENST00000260383 RND3P61587 244 aa11.79□□□□□ -0.52
TUBGCP4-201ENST00000260383 CARFQ8N187 725 aa11.79□□□□□ -0.52
TUBGCP4-201ENST00000260383 IGSF21Q96ID5 467 aa11.79□□□□□ -0.52
TUBGCP4-201ENST00000260383 RIMS4Q9H426 269 aaPredicted RBP11.79□□□□□ -0.52
TUBGCP4-201ENST00000260383 EMC9Q9Y3B6 208 aa11.79□□□□□ -0.52
TUBGCP4-201ENST00000260383 LRP12Q9Y561 859 aa11.79□□□□□ -0.52
TUBGCP4-201ENST00000260383 A0A0A6YYD4 124 aa11.79□□□□□ -0.52
TUBGCP4-201ENST00000260383 LOC107986453A0A1B0GWG9 222 aa11.79□□□□□ -0.52
TUBGCP4-201ENST00000260383 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.79□□□□□ -0.52
TUBGCP4-201ENST00000260383 MEGF11A6BM72 1044 aa11.79□□□□□ -0.52
TUBGCP4-201ENST00000260383 TOX3O15405 576 aaPredicted RBP11.79□□□□□ -0.52
TUBGCP4-201ENST00000260383 DLEU1O43261 78 aa11.79□□□□□ -0.52
TUBGCP4-201ENST00000260383 RAD51DO75771 328 aa11.79□□□□□ -0.52
TUBGCP4-201ENST00000260383 NKX2-2O95096 273 aa11.79□□□□□ -0.52
TUBGCP4-201ENST00000260383 SRP19P09132 144 aaKnown RBP11.79□□□□□ -0.52
TUBGCP4-201ENST00000260383 OR4A8P0C604 315 aa11.79□□□□□ -0.52
TUBGCP4-201ENST00000260383 PGA3P0DJD8 388 aa11.79□□□□□ -0.52
TUBGCP4-201ENST00000260383 PTGER4P35408 488 aa11.79□□□□□ -0.52
TUBGCP4-201ENST00000260383 AFF3P51826 1226 aaKnown RBP11.79□□□□□ -0.52
TUBGCP4-201ENST00000260383 ZP2Q05996 745 aa11.79□□□□□ -0.52
TUBGCP4-201ENST00000260383 PLAC9Q5JTB6 97 aa11.79□□□□□ -0.52
TUBGCP4-201ENST00000260383 SLC22A25Q6T423 547 aa11.79□□□□□ -0.52
TUBGCP4-201ENST00000260383 GALNTL5Q7Z4T8 443 aa11.79□□□□□ -0.52
TUBGCP4-201ENST00000260383 THNSL2Q86YJ6 484 aa11.79□□□□□ -0.52
TUBGCP4-201ENST00000260383 CYB561D1Q8N8Q1 229 aa11.79□□□□□ -0.52
TUBGCP4-201ENST00000260383 GATSQ8NAP1 163 aa11.79□□□□□ -0.52
TUBGCP4-201ENST00000260383 ZNF524Q96C55 264 aa11.79□□□□□ -0.52
TUBGCP4-201ENST00000260383 ACTR3CQ9C0K3 210 aaPredicted RBP11.79□□□□□ -0.52
TUBGCP4-201ENST00000260383 SPHK2Q9NRA0 654 aa11.79□□□□□ -0.52
TUBGCP4-201ENST00000260383 MRPL22Q9NWU5 206 aaKnown RBP11.79□□□□□ -0.52
TUBGCP4-201ENST00000260383 CACNA1IQ9P0X4 2223 aa11.79□□□□□ -0.52
TUBGCP4-201ENST00000260383 MANSC4A6NHS7 340 aaPredicted RBP11.78□□□□□ -0.52
TUBGCP4-201ENST00000260383 SOCS1O15524 211 aa11.78□□□□□ -0.52
TUBGCP4-201ENST00000260383 XRCC2O43543 280 aa11.78□□□□□ -0.52
TUBGCP4-201ENST00000260383 GMFGO60234 142 aa11.78□□□□□ -0.52
TUBGCP4-201ENST00000260383 RENP00797 406 aa11.78□□□□□ -0.52
TUBGCP4-201ENST00000260383 CXCR1P25024 350 aa11.78□□□□□ -0.52
TUBGCP4-201ENST00000260383 CTGFP29279 349 aa11.78□□□□□ -0.52
TUBGCP4-201ENST00000260383 SP3Q02447 781 aa11.78□□□□□ -0.52
TUBGCP4-201ENST00000260383 VAX1Q5SQQ9 334 aa11.78□□□□□ -0.52
TUBGCP4-201ENST00000260383 PLPP4Q5VZY2 271 aa11.78□□□□□ -0.52
TUBGCP4-201ENST00000260383 Q7L0L9 218 aa11.78□□□□□ -0.52
TUBGCP4-201ENST00000260383 OR4C3Q8NH37 302 aa11.78□□□□□ -0.52
TUBGCP4-201ENST00000260383 MRPL24Q96A35 216 aaKnown RBP11.78□□□□□ -0.52
TUBGCP4-201ENST00000260383 R3HDM4Q96D70 268 aa11.78□□□□□ -0.52
TUBGCP4-201ENST00000260383 OR2M4Q96R27 311 aa11.78□□□□□ -0.52
TUBGCP4-201ENST00000260383 TMEM106CQ9BVX2 250 aa11.78□□□□□ -0.52
TUBGCP4-201ENST00000260383 GPR87Q9BY21 358 aa11.78□□□□□ -0.52
TUBGCP4-201ENST00000260383 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.78□□□□□ -0.52
TUBGCP4-201ENST00000260383 LRIT1Q9P2V4 623 aa11.78□□□□□ -0.52
TUBGCP4-201ENST00000260383 HHLA2Q9UM44 414 aa11.78□□□□□ -0.52
TUBGCP4-201ENST00000260383 MRPS2Q9Y399 296 aaKnown RBP11.78□□□□□ -0.52
TUBGCP4-201ENST00000260383 OR1A2Q9Y585 309 aa11.78□□□□□ -0.52
TUBGCP4-201ENST00000260383 LIPGQ9Y5X9 500 aa11.78□□□□□ -0.52
TUBGCP4-201ENST00000260383 DOCK9Q9BZ29 2069 aa11.78□□□□□ -0.52
TUBGCP4-201ENST00000260383 TRBV23OR9-2A0A075B6M9 112 aa11.78□□□□□ -0.52
TUBGCP4-201ENST00000260383 HSPB2A8KAH6 182 aa11.78□□□□□ -0.52
TUBGCP4-201ENST00000260383 CDRT15L2A8MXV6 281 aa11.78□□□□□ -0.52
TUBGCP4-201ENST00000260383 CSTAP01040 98 aa11.78□□□□□ -0.52
TUBGCP4-201ENST00000260383 MMP7P09237 267 aaPredicted RBP11.78□□□□□ -0.52
TUBGCP4-201ENST00000260383 PNLIPP16233 465 aa11.78□□□□□ -0.52
TUBGCP4-201ENST00000260383 FUT3P21217 361 aa11.78□□□□□ -0.52
TUBGCP4-201ENST00000260383 TLX1P31314 330 aaPredicted RBP11.78□□□□□ -0.52
TUBGCP4-201ENST00000260383 P2RY1P47900 373 aa11.78□□□□□ -0.52
TUBGCP4-201ENST00000260383 SUCLG1P53597 346 aaKnown RBP11.78□□□□□ -0.52
TUBGCP4-201ENST00000260383 HSD17B7P56937 341 aa11.78□□□□□ -0.52
TUBGCP4-201ENST00000260383 CDK3Q00526 305 aa11.78□□□□□ -0.52
TUBGCP4-201ENST00000260383 EGR4Q05215 589 aa11.78□□□□□ -0.52
TUBGCP4-201ENST00000260383 MESP2Q0VG99 397 aa11.78□□□□□ -0.52
TUBGCP4-201ENST00000260383 NFATC4Q14934 902 aa11.78□□□□□ -0.52
TUBGCP4-201ENST00000260383 HSPB2Q16082 182 aa11.78□□□□□ -0.52
TUBGCP4-201ENST00000260383 TCEAL8Q8IYN2 117 aa11.78□□□□□ -0.52
TUBGCP4-201ENST00000260383 SPACA5Q96QH8 159 aa11.78□□□□□ -0.52
TUBGCP4-201ENST00000260383 MMP25Q9NPA2 562 aa11.78□□□□□ -0.52
TUBGCP4-201ENST00000260383 A0A1B0GW64 132 aa11.77□□□□□ -0.52
TUBGCP4-201ENST00000260383 K7N7A8 449 aa11.77□□□□□ -0.52
TUBGCP4-201ENST00000260383 GNG10P50151 68 aa11.77□□□□□ -0.52
TUBGCP4-201ENST00000260383 NKAIN1Q4KMZ8 207 aa11.77□□□□□ -0.52
TUBGCP4-201ENST00000260383 SPSB3Q6PJ21 355 aa11.77□□□□□ -0.52
TUBGCP4-201ENST00000260383 C17orf99Q6UX52 265 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms