RNA–Protein interactions for RNA: ENST00000243103.3

HOXC12-201, Transcript of homeobox C12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC12, Length 3,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12-201ENST00000243103 MYF5P13349 255 aa13.4□□□□□ -0.26
HOXC12-201ENST00000243103 STARD6P59095 220 aa13.4□□□□□ -0.26
HOXC12-201ENST00000243103 HNRNPA1L2Q32P51 320 aaKnown RBP13.4□□□□□ -0.26
HOXC12-201ENST00000243103 ALG10Q5BKT4 473 aa13.4□□□□□ -0.26
HOXC12-201ENST00000243103 C1QL3Q5VWW1 255 aa13.4□□□□□ -0.26
HOXC12-201ENST00000243103 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.4□□□□□ -0.26
HOXC12-201ENST00000243103 ZNF784Q8NCA9 323 aaPredicted RBP13.4□□□□□ -0.26
HOXC12-201ENST00000243103 OR2A1Q8NGT9 310 aa13.4□□□□□ -0.26
HOXC12-201ENST00000243103 C15orf40Q8WUR7 153 aa13.4□□□□□ -0.26
HOXC12-201ENST00000243103 CCDC3Q9BQI4 270 aa13.4□□□□□ -0.26
HOXC12-201ENST00000243103 SNHG12Q9BXW3 62 aa13.4□□□□□ -0.26
HOXC12-201ENST00000243103 SHANK1Q9Y566 2161 aa13.4□□□□□ -0.26
HOXC12-201ENST00000243103 C2orf72A6NCS6 295 aa13.39□□□□□ -0.27
HOXC12-201ENST00000243103 SEC14L6B5MCN3 397 aa13.39□□□□□ -0.27
HOXC12-201ENST00000243103 C1QTNF3-AMACRE9PGA6 284 aa13.39□□□□□ -0.27
HOXC12-201ENST00000243103 H3BP45 60 aa13.39□□□□□ -0.27
HOXC12-201ENST00000243103 KAT7O95251 611 aa13.39□□□□□ -0.27
HOXC12-201ENST00000243103 SLC25A4P12235 298 aa13.39□□□□□ -0.27
HOXC12-201ENST00000243103 PAX6P26367 422 aa13.39□□□□□ -0.27
HOXC12-201ENST00000243103 ELAVL3Q14576 367 aaKnown RBP13.39□□□□□ -0.27
HOXC12-201ENST00000243103 GPR157Q5UAW9 335 aa13.39□□□□□ -0.27
HOXC12-201ENST00000243103 ABHD17CQ6PCB6 329 aa13.39□□□□□ -0.27
HOXC12-201ENST00000243103 PAQR4Q8N4S7 273 aaPredicted RBP13.39□□□□□ -0.27
HOXC12-201ENST00000243103 PDE7BQ9NP56 450 aa13.39□□□□□ -0.27
HOXC12-201ENST00000243103 ETV7Q9Y603 341 aa13.39□□□□□ -0.27
HOXC12-201ENST00000243103 EMP2P54851 167 aa13.39□□□□□ -0.27
HOXC12-201ENST00000243103 SYS1Q8N2H4 156 aa13.39□□□□□ -0.27
HOXC12-201ENST00000243103 ZNF619Q8N2I2 560 aa13.39□□□□□ -0.27
HOXC12-201ENST00000243103 SLC43A2Q8N370 569 aa13.39□□□□□ -0.27
HOXC12-201ENST00000243103 MTCL1Q9Y4B5 1905 aaKnown RBP13.39□□□□□ -0.27
HOXC12-201ENST00000243103 A0A0A6YYD5 115 aa13.39□□□□□ -0.27
HOXC12-201ENST00000243103 A0A1B0GTI1 187 aa13.39□□□□□ -0.27
HOXC12-201ENST00000243103 OR4C45A6NMZ5 311 aa13.39□□□□□ -0.27
HOXC12-201ENST00000243103 XKRYO14609 159 aa13.39□□□□□ -0.27
HOXC12-201ENST00000243103 CST7O76096 145 aa13.39□□□□□ -0.27
HOXC12-201ENST00000243103 APBB3O95704 486 aa13.39□□□□□ -0.27
HOXC12-201ENST00000243103 CELA2BP08218 269 aaPredicted RBP13.39□□□□□ -0.27
HOXC12-201ENST00000243103 HOXC4P09017 264 aaPredicted RBP13.39□□□□□ -0.27
HOXC12-201ENST00000243103 C7orf61Q8IZ16 206 aa13.39□□□□□ -0.27
HOXC12-201ENST00000243103 IL22RA2Q969J5 263 aa13.39□□□□□ -0.27
HOXC12-201ENST00000243103 SPOCK3Q9BQ16 436 aa13.39□□□□□ -0.27
HOXC12-201ENST00000243103 C19orf12Q9NSK7 152 aa13.39□□□□□ -0.27
HOXC12-201ENST00000243103 SLC7A11Q9UPY5 501 aa13.39□□□□□ -0.27
HOXC12-201ENST00000243103 TIMM10BQ9Y5J6 103 aa13.39□□□□□ -0.27
HOXC12-201ENST00000243103 SNAPC5O75971 98 aa13.38□□□□□ -0.27
HOXC12-201ENST00000243103 ONECUT2O95948 504 aa13.38□□□□□ -0.27
HOXC12-201ENST00000243103 FGF8P55075 233 aaPredicted RBP13.38□□□□□ -0.27
HOXC12-201ENST00000243103 SLC37A1P57057 533 aa13.38□□□□□ -0.27
HOXC12-201ENST00000243103 RUNX1Q01196 453 aa13.38□□□□□ -0.27
HOXC12-201ENST00000243103 ZNF429Q86V71 674 aa13.38□□□□□ -0.27
HOXC12-201ENST00000243103 SLC25A42Q86VD7 318 aa13.38□□□□□ -0.27
HOXC12-201ENST00000243103 SLC35G3Q8N808 338 aa13.38□□□□□ -0.27
HOXC12-201ENST00000243103 FAM210BQ96KR6 192 aa13.38□□□□□ -0.27
HOXC12-201ENST00000243103 SLC35B3Q9H1N7 401 aa13.38□□□□□ -0.27
HOXC12-201ENST00000243103 LUZP4Q9P127 313 aa13.38□□□□□ -0.27
HOXC12-201ENST00000243103 LRIT1Q9P2V4 623 aa13.38□□□□□ -0.27
HOXC12-201ENST00000243103 KIR3DL2P43630 455 aa13.38□□□□□ -0.27
HOXC12-201ENST00000243103 PDCD1Q15116 288 aa13.38□□□□□ -0.27
HOXC12-201ENST00000243103 TMEM225Q6GV28 225 aa13.38□□□□□ -0.27
HOXC12-201ENST00000243103 HIST3H2BBQ8N257 126 aa13.38□□□□□ -0.27
HOXC12-201ENST00000243103 SPACA7Q96KW9 195 aa13.38□□□□□ -0.27
HOXC12-201ENST00000243103 GNG13Q9P2W3 67 aa13.38□□□□□ -0.27
HOXC12-201ENST00000243103 POLR1DQ9Y2S0 133 aa13.38□□□□□ -0.27
HOXC12-201ENST00000243103 PHF3Q92576 2039 aaKnown RBP13.38□□□□□ -0.27
HOXC12-201ENST00000243103 MYO7BQ6PIF6 2116 aa13.38□□□□□ -0.27
HOXC12-201ENST00000243103 LOC390937A0A1W2PQ73 354 aa13.38□□□□□ -0.27
HOXC12-201ENST00000243103 MASP2O00187 686 aa13.38□□□□□ -0.27
HOXC12-201ENST00000243103 P2RX6O15547 441 aa13.38□□□□□ -0.27
HOXC12-201ENST00000243103 CA11O75493 328 aa13.38□□□□□ -0.27
HOXC12-201ENST00000243103 CRTAPO75718 401 aaPredicted RBP13.38□□□□□ -0.27
HOXC12-201ENST00000243103 C5AR1P21730 350 aa13.38□□□□□ -0.27
HOXC12-201ENST00000243103 ZNF77Q15935 545 aa13.38□□□□□ -0.27
HOXC12-201ENST00000243103 MAJINQ3KP22 176 aa13.38□□□□□ -0.27
HOXC12-201ENST00000243103 PRAMEF8Q5VWM4 474 aa13.38□□□□□ -0.27
HOXC12-201ENST00000243103 PRAMEF7Q5VXH5 474 aa13.38□□□□□ -0.27
HOXC12-201ENST00000243103 CRIPAKQ8N1N5 446 aa13.38□□□□□ -0.27
HOXC12-201ENST00000243103 TMEM52Q8NDY8 209 aa13.38□□□□□ -0.27
HOXC12-201ENST00000243103 SLC22A18Q96BI1 424 aa13.38□□□□□ -0.27
HOXC12-201ENST00000243103 HIST1H2BLQ99880 126 aa13.38□□□□□ -0.27
HOXC12-201ENST00000243103 SLC17A9Q9BYT1 436 aa13.38□□□□□ -0.27
HOXC12-201ENST00000243103 PLA2G2FQ9BZM2 168 aa13.38□□□□□ -0.27
HOXC12-201ENST00000243103 RNF122Q9H9V4 155 aa13.38□□□□□ -0.27
HOXC12-201ENST00000243103 DCHS1Q96JQ0 3298 aa13.37□□□□□ -0.27
HOXC12-201ENST00000243103 RDH16O75452 317 aa13.37□□□□□ -0.27
HOXC12-201ENST00000243103 UPK3AO75631 287 aa13.37□□□□□ -0.27
HOXC12-201ENST00000243103 AK1P00568 194 aa13.37□□□□□ -0.27
HOXC12-201ENST00000243103 CT62P0C5K7 136 aa13.37□□□□□ -0.27
HOXC12-201ENST00000243103 ARRB1P49407 418 aaPredicted RBP13.37□□□□□ -0.27
HOXC12-201ENST00000243103 PRDX1Q06830 199 aaKnown RBP13.37□□□□□ -0.27
HOXC12-201ENST00000243103 CARFQ8N187 725 aa13.37□□□□□ -0.27
HOXC12-201ENST00000243103 OR52N4Q8NGI2 321 aa13.37□□□□□ -0.27
HOXC12-201ENST00000243103 FAM71F1Q96KD3 344 aaPredicted RBP13.37□□□□□ -0.27
HOXC12-201ENST00000243103 NUDT9Q9BW91 350 aa13.37□□□□□ -0.27
HOXC12-201ENST00000243103 LAMP3Q9UQV4 416 aa13.37□□□□□ -0.27
HOXC12-201ENST00000243103 PPIL1Q9Y3C6 166 aa13.37□□□□□ -0.27
HOXC12-201ENST00000243103 A0A1W2PPQ1 181 aa13.37□□□□□ -0.27
HOXC12-201ENST00000243103 HLA-HP01893 362 aa13.37□□□□□ -0.27
HOXC12-201ENST00000243103 CD5P06127 495 aa13.37□□□□□ -0.27
HOXC12-201ENST00000243103 ZNF735P0CB33 412 aa13.37□□□□□ -0.27
HOXC12-201ENST00000243103 PRPS1P60891 318 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms