RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 KCNJ3P48549 501 aa13.33□□□□□ -0.28
EFNB1-201ENST00000204961 DAP3P51398 398 aaKnown RBP13.33□□□□□ -0.28
EFNB1-201ENST00000204961 RAB32Q13637 225 aa13.33□□□□□ -0.28
EFNB1-201ENST00000204961 PHLDA2Q53GA4 152 aa13.33□□□□□ -0.28
EFNB1-201ENST00000204961 ZNF813Q6ZN06 617 aa13.33□□□□□ -0.28
EFNB1-201ENST00000204961 SYT13Q7L8C5 426 aa13.33□□□□□ -0.28
EFNB1-201ENST00000204961 ZNF501Q96CX3 271 aaPredicted RBP13.33□□□□□ -0.28
EFNB1-201ENST00000204961 OR10C1Q96KK4 312 aa13.33□□□□□ -0.28
EFNB1-201ENST00000204961 CMTM3Q96MX0 182 aa13.33□□□□□ -0.28
EFNB1-201ENST00000204961 PRRT1Q99946 306 aa13.33□□□□□ -0.28
EFNB1-201ENST00000204961 GAREM1Q9H706 876 aa13.33□□□□□ -0.28
EFNB1-201ENST00000204961 RAB22AQ9UL26 194 aa13.33□□□□□ -0.28
EFNB1-201ENST00000204961 EDARQ9UNE0 448 aa13.33□□□□□ -0.28
EFNB1-201ENST00000204961 NPIPB7O75200 414 aa13.33□□□□□ -0.28
EFNB1-201ENST00000204961 TRAPPC6AO75865 159 aa13.33□□□□□ -0.28
EFNB1-201ENST00000204961 DIRAS3O95661 229 aa13.33□□□□□ -0.28
EFNB1-201ENST00000204961 ANKRD37Q7Z713 158 aa13.33□□□□□ -0.28
EFNB1-201ENST00000204961 SLC43A2Q8N370 569 aa13.33□□□□□ -0.28
EFNB1-201ENST00000204961 RPS4Y2Q8TD47 263 aa13.33□□□□□ -0.28
EFNB1-201ENST00000204961 KCNK17Q96T54 332 aa13.33□□□□□ -0.28
EFNB1-201ENST00000204961 SLC25A21Q9BQT8 299 aaPredicted RBP13.33□□□□□ -0.28
EFNB1-201ENST00000204961 MRI1Q9BV20 369 aa13.33□□□□□ -0.28
EFNB1-201ENST00000204961 IGKV1D-8A0A087WSZ0 117 aa13.32□□□□□ -0.28
EFNB1-201ENST00000204961 HMSDA8MTL9 139 aa13.32□□□□□ -0.28
EFNB1-201ENST00000204961 EFSO43281 561 aa13.32□□□□□ -0.28
EFNB1-201ENST00000204961 HPP00738 406 aa13.32□□□□□ -0.28
EFNB1-201ENST00000204961 TMEM50BP56557 158 aa13.32□□□□□ -0.28
EFNB1-201ENST00000204961 LILRB1Q8NHL6 650 aaPredicted RBP13.32□□□□□ -0.28
EFNB1-201ENST00000204961 LILRA5A6NI73 299 aa13.32□□□□□ -0.28
EFNB1-201ENST00000204961 H0YIZ8 118 aa13.32□□□□□ -0.28
EFNB1-201ENST00000204961 CNR1P21554 472 aa13.32□□□□□ -0.28
EFNB1-201ENST00000204961 RPS18P62269 152 aaKnown RBP13.32□□□□□ -0.28
EFNB1-201ENST00000204961 CCL7P80098 99 aa13.32□□□□□ -0.28
EFNB1-201ENST00000204961 SMAD4Q13485 552 aaKnown RBP13.32□□□□□ -0.28
EFNB1-201ENST00000204961 HSD17B13Q7Z5P4 300 aaPredicted RBP13.32□□□□□ -0.28
EFNB1-201ENST00000204961 YRDCQ86U90 279 aaKnown RBP13.32□□□□□ -0.28
EFNB1-201ENST00000204961 SUMF1Q8NBK3 374 aa13.32□□□□□ -0.28
EFNB1-201ENST00000204961 SEMA6DQ8NFY4 1073 aa13.32□□□□□ -0.28
EFNB1-201ENST00000204961 EMC3Q9P0I2 261 aa13.32□□□□□ -0.28
EFNB1-201ENST00000204961 MEGF11A6BM72 1044 aa13.31□□□□□ -0.28
EFNB1-201ENST00000204961 LIPT2A6NK58 231 aa13.31□□□□□ -0.28
EFNB1-201ENST00000204961 DAOP14920 347 aa13.31□□□□□ -0.28
EFNB1-201ENST00000204961 ZBTB25P24278 435 aa13.31□□□□□ -0.28
EFNB1-201ENST00000204961 PUSL1Q8N0Z8 303 aaKnown RBP13.31□□□□□ -0.28
EFNB1-201ENST00000204961 MR1Q95460 341 aa13.31□□□□□ -0.28
EFNB1-201ENST00000204961 FAM206AQ9NX38 181 aa13.31□□□□□ -0.28
EFNB1-201ENST00000204961 NXT1Q9UKK6 140 aaKnown RBP13.31□□□□□ -0.28
EFNB1-201ENST00000204961 CACNA1HO95180 2353 aa13.31□□□□□ -0.28
EFNB1-201ENST00000204961 LAMA5O15230 3695 aa13.31□□□□□ -0.28
EFNB1-201ENST00000204961 MEX3AA1L020 520 aaKnown RBP13.31□□□□□ -0.28
EFNB1-201ENST00000204961 PATE3B3GLJ2 98 aa13.31□□□□□ -0.28
EFNB1-201ENST00000204961 ABCD4O14678 606 aa13.31□□□□□ -0.28
EFNB1-201ENST00000204961 CD1AP06126 327 aa13.31□□□□□ -0.28
EFNB1-201ENST00000204961 MGMTP16455 207 aa13.31□□□□□ -0.28
EFNB1-201ENST00000204961 PSMB6P28072 239 aa13.31□□□□□ -0.28
EFNB1-201ENST00000204961 ROM1Q03395 351 aa13.31□□□□□ -0.28
EFNB1-201ENST00000204961 SRYQ05066 204 aa13.31□□□□□ -0.28
EFNB1-201ENST00000204961 CHRFAM7AQ494W8 412 aa13.31□□□□□ -0.28
EFNB1-201ENST00000204961 OR2A2Q6IF42 318 aa13.31□□□□□ -0.28
EFNB1-201ENST00000204961 FAM166AQ6J272 317 aa13.31□□□□□ -0.28
EFNB1-201ENST00000204961 CLEC18BQ6UXF7 455 aa13.31□□□□□ -0.28
EFNB1-201ENST00000204961 TMEM156Q8N614 296 aa13.31□□□□□ -0.28
EFNB1-201ENST00000204961 OR6K3Q8NGY3 331 aa13.31□□□□□ -0.28
EFNB1-201ENST00000204961 LPAR5Q9H1C0 372 aa13.31□□□□□ -0.28
EFNB1-201ENST00000204961 TNFSF18Q9UNG2 199 aa13.31□□□□□ -0.28
EFNB1-201ENST00000204961 RFNGQ9Y644 331 aa13.31□□□□□ -0.28
EFNB1-201ENST00000204961 ATG2AQ2TAZ0 1938 aa13.31□□□□□ -0.28
EFNB1-201ENST00000204961 TUBAL3A6NHL2 446 aa13.31□□□□□ -0.28
EFNB1-201ENST00000204961 TO15178 435 aa13.31□□□□□ -0.28
EFNB1-201ENST00000204961 NDUFA2O43678 99 aa13.31□□□□□ -0.28
EFNB1-201ENST00000204961 ACTL6AO96019 429 aa13.31□□□□□ -0.28
EFNB1-201ENST00000204961 IGHG1P01857 330 aa13.31□□□□□ -0.28
EFNB1-201ENST00000204961 ZNF806P0C7X5 589 aa13.31□□□□□ -0.28
EFNB1-201ENST00000204961 RD3LP0DJH9 198 aa13.31□□□□□ -0.28
EFNB1-201ENST00000204961 CCL2P13500 99 aa13.31□□□□□ -0.28
EFNB1-201ENST00000204961 CBX5P45973 191 aa13.31□□□□□ -0.28
EFNB1-201ENST00000204961 NXPH1P58417 271 aa13.31□□□□□ -0.28
EFNB1-201ENST00000204961 FLI1Q01543 452 aaPredicted RBP13.31□□□□□ -0.28
EFNB1-201ENST00000204961 IGFBP7Q16270 282 aa13.31□□□□□ -0.28
EFNB1-201ENST00000204961 ANKRD55Q3KP44 614 aa13.31□□□□□ -0.28
EFNB1-201ENST00000204961 PHYHD1Q5SRE7 291 aa13.31□□□□□ -0.28
EFNB1-201ENST00000204961 ACOT7LQ6ZUV0 252 aa13.31□□□□□ -0.28
EFNB1-201ENST00000204961 MYPOPQ86VE0 399 aaPredicted RBP13.31□□□□□ -0.28
EFNB1-201ENST00000204961 ZSCAN4Q8NAM6 433 aaPredicted RBP13.31□□□□□ -0.28
EFNB1-201ENST00000204961 AKR7LQ8NHP1 331 aa13.31□□□□□ -0.28
EFNB1-201ENST00000204961 NANPQ8TBE9 248 aa13.31□□□□□ -0.28
EFNB1-201ENST00000204961 LIPHQ8WWY8 451 aa13.31□□□□□ -0.28
EFNB1-201ENST00000204961 ALKBH3Q96Q83 286 aaPredicted RBP13.31□□□□□ -0.28
EFNB1-201ENST00000204961 MFRPQ9BY79 579 aa13.31□□□□□ -0.28
EFNB1-201ENST00000204961 PIGLQ9Y2B2 252 aa13.31□□□□□ -0.28
EFNB1-201ENST00000204961 PCDHGA1Q9Y5H4 931 aa13.31□□□□□ -0.28
EFNB1-201ENST00000204961 SULT1C2O00338 296 aa13.3□□□□□ -0.28
EFNB1-201ENST00000204961 JMJD7P0C870 316 aa13.3□□□□□ -0.28
EFNB1-201ENST00000204961 UBCP0CG48 685 aaKnown RBP13.3□□□□□ -0.28
EFNB1-201ENST00000204961 PPIAP62937 165 aaKnown RBP13.3□□□□□ -0.28
EFNB1-201ENST00000204961 FGL1Q08830 312 aa13.3□□□□□ -0.28
EFNB1-201ENST00000204961 CPEB2Q7Z5Q1 589 aaKnown RBP13.3□□□□□ -0.28
EFNB1-201ENST00000204961 RNF133Q8WVZ7 376 aa13.3□□□□□ -0.28
EFNB1-201ENST00000204961 FAAP24Q9BTP7 215 aa13.3□□□□□ -0.28
EFNB1-201ENST00000204961 ESRP2Q9H6T0 727 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms