RNA–Protein interactions for RNA: ENST00000640264.1

HNRNPU-227, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 3

Gene HNRNPU, Length 328 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-227ENST00000640264 UBE2Q2LH0YL09 131 aa13.53□□□□□ -0.24
HNRNPU-227ENST00000640264 TBC1D8O95759 1140 aa13.53□□□□□ -0.24
HNRNPU-227ENST00000640264 ATP2B4P23634 1241 aa13.53□□□□□ -0.24
HNRNPU-227ENST00000640264 TTLL12Q14166 644 aaPredicted RBP13.53□□□□□ -0.24
HNRNPU-227ENST00000640264 ZNF296Q8WUU4 475 aaPredicted RBP13.53□□□□□ -0.24
HNRNPU-227ENST00000640264 XDHP47989 1333 aa13.53□□□□□ -0.24
HNRNPU-227ENST00000640264 PDE8AO60658 829 aa13.52□□□□□ -0.25
HNRNPU-227ENST00000640264 MOB2Q70IA6 237 aa13.52□□□□□ -0.25
HNRNPU-227ENST00000640264 ANKRD18AQ8IVF6 992 aa13.52□□□□□ -0.25
HNRNPU-227ENST00000640264 CCDC191Q8NCU4 936 aa13.52□□□□□ -0.25
HNRNPU-227ENST00000640264 MYD88Q99836 296 aa13.52□□□□□ -0.25
HNRNPU-227ENST00000640264 PCCAP05165 728 aaPredicted RBP13.51□□□□□ -0.25
HNRNPU-227ENST00000640264 NF2P35240 595 aa13.51□□□□□ -0.25
HNRNPU-227ENST00000640264 TM4SF4P48230 202 aa13.51□□□□□ -0.25
HNRNPU-227ENST00000640264 NOM1Q5C9Z4 860 aaKnown RBP13.51□□□□□ -0.25
HNRNPU-227ENST00000640264 OGFOD1Q8N543 542 aa13.51□□□□□ -0.25
HNRNPU-227ENST00000640264 CCDC85AQ96PX6 553 aaPredicted RBP13.51□□□□□ -0.25
HNRNPU-227ENST00000640264 CWC25Q9NXE8 425 aaPredicted RBP13.51□□□□□ -0.25
HNRNPU-227ENST00000640264 SCAF8Q9UPN6 1271 aaKnown RBP13.51□□□□□ -0.25
HNRNPU-227ENST00000640264 GPR25O00155 361 aa13.5□□□□□ -0.25
HNRNPU-227ENST00000640264 SREBF2Q12772 1141 aa13.5□□□□□ -0.25
HNRNPU-227ENST00000640264 NBPF9Q3BBW0 867 aa13.5□□□□□ -0.25
HNRNPU-227ENST00000640264 PRAMEF18Q5VWM3 479 aa13.5□□□□□ -0.25
HNRNPU-227ENST00000640264 CDC5LQ99459 802 aaKnown RBP13.5□□□□□ -0.25
HNRNPU-227ENST00000640264 FBXO46Q6PJ61 603 aaPredicted RBP13.49□□□□□ -0.25
HNRNPU-227ENST00000640264 TRMT2AQ8IZ69 625 aaKnown RBP13.49□□□□□ -0.25
HNRNPU-227ENST00000640264 JARID2Q92833 1246 aaPredicted RBP13.49□□□□□ -0.25
HNRNPU-227ENST00000640264 PHAXQ9H814 394 aaKnown RBP13.49□□□□□ -0.25
HNRNPU-227ENST00000640264 MBIPQ9NS73 344 aa13.49□□□□□ -0.25
HNRNPU-227ENST00000640264 MED23Q9ULK4 1368 aa13.48□□□□□ -0.25
HNRNPU-227ENST00000640264 MYO3BQ8WXR4 1341 aa13.48□□□□□ -0.25
HNRNPU-227ENST00000640264 DDX58O95786 925 aaKnown RBP13.48□□□□□ -0.25
HNRNPU-227ENST00000640264 MMP14P50281 582 aa13.48□□□□□ -0.25
HNRNPU-227ENST00000640264 MKRN3Q13064 507 aaKnown RBP13.48□□□□□ -0.25
HNRNPU-227ENST00000640264 NCBP3Q53F19 620 aaKnown RBP13.48□□□□□ -0.25
HNRNPU-227ENST00000640264 ARMC9Q7Z3E5 817 aa13.48□□□□□ -0.25
HNRNPU-227ENST00000640264 FBXW7Q969H0 707 aa13.48□□□□□ -0.25
HNRNPU-227ENST00000640264 CDCA7LQ96GN5 454 aa13.48□□□□□ -0.25
HNRNPU-227ENST00000640264 WNT10BO00744 389 aa13.47□□□□□ -0.25
HNRNPU-227ENST00000640264 APAF1O14727 1248 aa13.47□□□□□ -0.25
HNRNPU-227ENST00000640264 FKTNO75072 461 aa13.47□□□□□ -0.25
HNRNPU-227ENST00000640264 CALD1Q05682 793 aaKnown RBP13.47□□□□□ -0.25
HNRNPU-227ENST00000640264 DACT2Q5SW24 774 aa13.47□□□□□ -0.25
HNRNPU-227ENST00000640264 STRIP1Q5VSL9 837 aa13.47□□□□□ -0.25
HNRNPU-227ENST00000640264 METTL22Q9BUU2 404 aaPredicted RBP13.47□□□□□ -0.25
HNRNPU-227ENST00000640264 CHMP4AQ9BY43 222 aa13.47□□□□□ -0.25
HNRNPU-227ENST00000640264 ELL2O00472 640 aaPredicted RBP13.46□□□□□ -0.25
HNRNPU-227ENST00000640264 ALDH1A1P00352 501 aa13.46□□□□□ -0.25
HNRNPU-227ENST00000640264 CTSWP56202 376 aa13.46□□□□□ -0.25
HNRNPU-227ENST00000640264 PTPN12Q05209 780 aaKnown RBP13.46□□□□□ -0.25
HNRNPU-227ENST00000640264 APOBEC3FQ8IUX4 373 aaKnown RBP13.46□□□□□ -0.25
HNRNPU-227ENST00000640264 EXOC6Q8TAG9 804 aa13.46□□□□□ -0.25
HNRNPU-227ENST00000640264 GCC1Q96CN9 775 aa13.46□□□□□ -0.25
HNRNPU-227ENST00000640264 MXD3Q9BW11 206 aa13.46□□□□□ -0.25
HNRNPU-227ENST00000640264 CFHR5Q9BXR6 569 aa13.46□□□□□ -0.25
HNRNPU-227ENST00000640264 COA1Q9GZY4 146 aa13.46□□□□□ -0.25
HNRNPU-227ENST00000640264 BSDC1Q9NW68 430 aaPredicted RBP13.46□□□□□ -0.25
HNRNPU-227ENST00000640264 IFT57Q9NWB7 429 aa13.46□□□□□ -0.25
HNRNPU-227ENST00000640264 MINPP1Q9UNW1 487 aa13.46□□□□□ -0.25
HNRNPU-227ENST00000640264 WTIPA6NIX2 430 aaPredicted RBP13.45□□□□□ -0.26
HNRNPU-227ENST00000640264 SASH1O94885 1247 aa13.45□□□□□ -0.26
HNRNPU-227ENST00000640264 ZNF853P0CG23 659 aa13.45□□□□□ -0.26
HNRNPU-227ENST00000640264 CCT4P50991 539 aaKnown RBP13.45□□□□□ -0.26
HNRNPU-227ENST00000640264 GNAI1P63096 354 aa13.45□□□□□ -0.26
HNRNPU-227ENST00000640264 SLFN5Q08AF3 891 aa13.45□□□□□ -0.26
HNRNPU-227ENST00000640264 PRKG1Q13976 671 aa13.45□□□□□ -0.26
HNRNPU-227ENST00000640264 SPEF2Q9C093 1822 aa13.45□□□□□ -0.26
HNRNPU-227ENST00000640264 MYH3P11055 1940 aa13.45□□□□□ -0.26
HNRNPU-227ENST00000640264 MS4A1P11836 297 aa13.44□□□□□ -0.26
HNRNPU-227ENST00000640264 INHBEP58166 350 aa13.44□□□□□ -0.26
HNRNPU-227ENST00000640264 CCDC30Q5VVM6 783 aa13.44□□□□□ -0.26
HNRNPU-227ENST00000640264 SPRYD7Q5W111 196 aa13.44□□□□□ -0.26
HNRNPU-227ENST00000640264 TTLL5Q6EMB2 1281 aa13.44□□□□□ -0.26
HNRNPU-227ENST00000640264 TTLL11Q8NHH1 800 aa13.44□□□□□ -0.26
HNRNPU-227ENST00000640264 GREM2Q9H772 168 aa13.44□□□□□ -0.26
HNRNPU-227ENST00000640264 ANGEL1Q9UNK9 670 aaKnown RBP13.44□□□□□ -0.26
HNRNPU-227ENST00000640264 MAP3K2Q9Y2U5 619 aa13.44□□□□□ -0.26
HNRNPU-227ENST00000640264 LEMD3Q9Y2U8 911 aa13.44□□□□□ -0.26
HNRNPU-227ENST00000640264 NEXNQ0ZGT2 675 aa13.43□□□□□ -0.26
HNRNPU-227ENST00000640264 LDLRAD1Q5T700 205 aa13.43□□□□□ -0.26
HNRNPU-227ENST00000640264 R3HDMLQ9H3Y0 253 aa13.43□□□□□ -0.26
HNRNPU-227ENST00000640264 ZNF646O15015 1829 aaPredicted RBP13.42□□□□□ -0.26
HNRNPU-227ENST00000640264 MANSC4A6NHS7 340 aaPredicted RBP13.42□□□□□ -0.26
HNRNPU-227ENST00000640264 IGHMBP2P38935 993 aaKnown RBP13.42□□□□□ -0.26
HNRNPU-227ENST00000640264 INTS3Q68E01 1043 aaKnown RBP13.42□□□□□ -0.26
HNRNPU-227ENST00000640264 KSR2Q6VAB6 950 aa13.42□□□□□ -0.26
HNRNPU-227ENST00000640264 KIAA0825Q8IV33 1275 aa13.42□□□□□ -0.26
HNRNPU-227ENST00000640264 C8orf58Q8NAV2 365 aa13.42□□□□□ -0.26
HNRNPU-227ENST00000640264 SLC10A4Q96EP9 437 aa13.42□□□□□ -0.26
HNRNPU-227ENST00000640264 ANKRD2Q9GZV1 360 aa13.42□□□□□ -0.26
HNRNPU-227ENST00000640264 SALL2Q9Y467 1007 aaPredicted RBP13.42□□□□□ -0.26
HNRNPU-227ENST00000640264 TRIM17Q9Y577 477 aa13.42□□□□□ -0.26
HNRNPU-227ENST00000640264 ZNF804BA4D1E1 1349 aa13.41□□□□□ -0.26
HNRNPU-227ENST00000640264 PI4KAP2A4QPH2 592 aa13.41□□□□□ -0.26
HNRNPU-227ENST00000640264 TXNRD3Q86VQ6 643 aa13.41□□□□□ -0.26
HNRNPU-227ENST00000640264 IFNL1Q8IU54 200 aa13.41□□□□□ -0.26
HNRNPU-227ENST00000640264 PI4KAP1Q8N8J0 262 aa13.41□□□□□ -0.26
HNRNPU-227ENST00000640264 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.41□□□□□ -0.26
HNRNPU-227ENST00000640264 DEFB129Q9H1M3 183 aa13.41□□□□□ -0.26
HNRNPU-227ENST00000640264 COL1A1P02452 1464 aaPredicted RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms