RNA–Protein interactions for RNA: ENST00000638366.1

KCNC1-205, Transcript of potassium voltage-gated channel subfamily C member 1, human

TSL 5

Gene KCNC1, Length 660 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNC1-205	ENST00000638366	PHAX	Q9H814	394 aa	Known RBP	13.38	□□□□□ -0.27
KCNC1-205	ENST00000638366	CWC25	Q9NXE8	425 aa	Predicted RBP	13.38	□□□□□ -0.27
KCNC1-205	ENST00000638366	USP17L3	A6NCW0	530 aa		13.37	□□□□□ -0.27
KCNC1-205	ENST00000638366	USP17L4	A6NCW7	530 aa		13.37	□□□□□ -0.27
KCNC1-205	ENST00000638366		G3V3G9	751 aa		13.37	□□□□□ -0.27
KCNC1-205	ENST00000638366	CTSW	P56202	376 aa		13.37	□□□□□ -0.27
KCNC1-205	ENST00000638366	CCDC27	Q2M243	656 aa		13.37	□□□□□ -0.27
KCNC1-205	ENST00000638366	NOM1	Q5C9Z4	860 aa	Known RBP	13.37	□□□□□ -0.27
KCNC1-205	ENST00000638366	DCAF8	Q5TAQ9	597 aa		13.37	□□□□□ -0.27
KCNC1-205	ENST00000638366	MOB2	Q70IA6	237 aa		13.37	□□□□□ -0.27
KCNC1-205	ENST00000638366	USP17L1	Q7RTZ2	530 aa		13.37	□□□□□ -0.27
KCNC1-205	ENST00000638366	PODN	Q7Z5L7	613 aa		13.37	□□□□□ -0.27
KCNC1-205	ENST00000638366	IFT57	Q9NWB7	429 aa		13.37	□□□□□ -0.27
KCNC1-205	ENST00000638366	MYO3B	Q8WXR4	1341 aa		13.37	□□□□□ -0.27
KCNC1-205	ENST00000638366	ATP2B4	P23634	1241 aa		13.36	□□□□□ -0.27
KCNC1-205	ENST00000638366	PKN2	Q16513	984 aa	Known RBP	13.36	□□□□□ -0.27
KCNC1-205	ENST00000638366	NCBP3	Q53F19	620 aa	Known RBP	13.36	□□□□□ -0.27
KCNC1-205	ENST00000638366	DACT2	Q5SW24	774 aa		13.36	□□□□□ -0.27
KCNC1-205	ENST00000638366	ANKRD18A	Q8IVF6	992 aa		13.36	□□□□□ -0.27
KCNC1-205	ENST00000638366	WWC1	Q8IX03	1113 aa		13.36	□□□□□ -0.27
KCNC1-205	ENST00000638366	ZNF296	Q8WUU4	475 aa	Predicted RBP	13.36	□□□□□ -0.27
KCNC1-205	ENST00000638366	CCDC85A	Q96PX6	553 aa	Predicted RBP	13.36	□□□□□ -0.27
KCNC1-205	ENST00000638366	SCAF8	Q9UPN6	1271 aa	Known RBP	13.36	□□□□□ -0.27
KCNC1-205	ENST00000638366	SALL2	Q9Y467	1007 aa	Predicted RBP	13.36	□□□□□ -0.27
KCNC1-205	ENST00000638366	ZSWIM8	A7E2V4	1837 aa		13.36	□□□□□ -0.27
KCNC1-205	ENST00000638366	NBPF9	Q3BBW0	867 aa		13.35	□□□□□ -0.27
KCNC1-205	ENST00000638366	CDC5L	Q99459	802 aa	Known RBP	13.35	□□□□□ -0.27
KCNC1-205	ENST00000638366	METTL22	Q9BUU2	404 aa	Predicted RBP	13.35	□□□□□ -0.27
KCNC1-205	ENST00000638366	CFHR5	Q9BXR6	569 aa		13.35	□□□□□ -0.27
KCNC1-205	ENST00000638366	KIAA0100	Q14667	2235 aa	Known RBP	13.35	□□□□□ -0.27
KCNC1-205	ENST00000638366	WNT10B	O00744	389 aa		13.34	□□□□□ -0.27
KCNC1-205	ENST00000638366	SASH1	O94885	1247 aa		13.34	□□□□□ -0.27
KCNC1-205	ENST00000638366	WTIP	A6NIX2	430 aa	Predicted RBP	13.33	□□□□□ -0.28
KCNC1-205	ENST00000638366	UBE2Q2L	H0YL09	131 aa		13.33	□□□□□ -0.28
KCNC1-205	ENST00000638366	JARID2	Q92833	1246 aa	Predicted RBP	13.33	□□□□□ -0.28
KCNC1-205	ENST00000638366	MXD3	Q9BW11	206 aa		13.33	□□□□□ -0.28
KCNC1-205	ENST00000638366	GREM2	Q9H772	168 aa		13.33	□□□□□ -0.28
KCNC1-205	ENST00000638366	TBC1D8	O95759	1140 aa		13.32	□□□□□ -0.28
KCNC1-205	ENST00000638366	DDX58	O95786	925 aa	Known RBP	13.32	□□□□□ -0.28
KCNC1-205	ENST00000638366	IGKV5-2	P06315	115 aa		13.32	□□□□□ -0.28
KCNC1-205	ENST00000638366	NF2	P35240	595 aa		13.32	□□□□□ -0.28
KCNC1-205	ENST00000638366	TM4SF4	P48230	202 aa		13.32	□□□□□ -0.28
KCNC1-205	ENST00000638366	CCT4	P50991	539 aa	Known RBP	13.32	□□□□□ -0.28
KCNC1-205	ENST00000638366	GNAI1	P63096	354 aa		13.32	□□□□□ -0.28
KCNC1-205	ENST00000638366	SREBF2	Q12772	1141 aa		13.32	□□□□□ -0.28
KCNC1-205	ENST00000638366	STRIP1	Q5VSL9	837 aa		13.32	□□□□□ -0.28
KCNC1-205	ENST00000638366	PRAMEF18	Q5VWM3	479 aa		13.32	□□□□□ -0.28
KCNC1-205	ENST00000638366	FBXO46	Q6PJ61	603 aa	Predicted RBP	13.32	□□□□□ -0.28
KCNC1-205	ENST00000638366	APOBEC3F	Q8IUX4	373 aa	Known RBP	13.32	□□□□□ -0.28
KCNC1-205	ENST00000638366	TTLL11	Q8NHH1	800 aa		13.32	□□□□□ -0.28
KCNC1-205	ENST00000638366	BSDC1	Q9NW68	430 aa	Predicted RBP	13.32	□□□□□ -0.28
KCNC1-205	ENST00000638366	HDAC9	Q9UKV0	1011 aa		13.32	□□□□□ -0.28
KCNC1-205	ENST00000638366	MINPP1	Q9UNW1	487 aa		13.32	□□□□□ -0.28
KCNC1-205	ENST00000638366	SZT2	Q5T011	3432 aa		13.32	□□□□□ -0.28
KCNC1-205	ENST00000638366	ZNF521	Q96K83	1311 aa		13.32	□□□□□ -0.28
KCNC1-205	ENST00000638366	GPR25	O00155	361 aa		13.31	□□□□□ -0.28
KCNC1-205	ENST00000638366	KLRK1	P26718	216 aa		13.31	□□□□□ -0.28
KCNC1-205	ENST00000638366	CALD1	Q05682	793 aa	Known RBP	13.31	□□□□□ -0.28
KCNC1-205	ENST00000638366	TTLL12	Q14166	644 aa	Predicted RBP	13.31	□□□□□ -0.28
KCNC1-205	ENST00000638366	OGFOD1	Q8N543	542 aa		13.31	□□□□□ -0.28
KCNC1-205	ENST00000638366	COA1	Q9GZY4	146 aa		13.31	□□□□□ -0.28
KCNC1-205	ENST00000638366	MAP3K2	Q9Y2U5	619 aa		13.31	□□□□□ -0.28
KCNC1-205	ENST00000638366	ELL2	O00472	640 aa	Predicted RBP	13.3	□□□□□ -0.28
KCNC1-205	ENST00000638366	MMP14	P50281	582 aa		13.3	□□□□□ -0.28
KCNC1-205	ENST00000638366	MKRN3	Q13064	507 aa	Known RBP	13.3	□□□□□ -0.28
KCNC1-205	ENST00000638366	CCDC30	Q5VVM6	783 aa		13.3	□□□□□ -0.28
KCNC1-205	ENST00000638366	TXNRD3	Q86VQ6	643 aa		13.3	□□□□□ -0.28
KCNC1-205	ENST00000638366	C8orf58	Q8NAV2	365 aa		13.3	□□□□□ -0.28
KCNC1-205	ENST00000638366	ZBED3	Q96IU2	234 aa	Predicted RBP	13.3	□□□□□ -0.28
KCNC1-205	ENST00000638366	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.3	□□□□□ -0.28
KCNC1-205	ENST00000638366	RANBP2	P49792	3224 aa	Known RBP	13.3	□□□□□ -0.28
KCNC1-205	ENST00000638366	PI4KAP2	A4QPH2	592 aa		13.29	□□□□□ -0.28
KCNC1-205	ENST00000638366	NEURL1B	A8MQ27	555 aa		13.29	□□□□□ -0.28
KCNC1-205	ENST00000638366	PTPN12	Q05209	780 aa	Known RBP	13.29	□□□□□ -0.28
KCNC1-205	ENST00000638366	LDLRAD1	Q5T700	205 aa		13.29	□□□□□ -0.28
KCNC1-205	ENST00000638366	WDR63	Q8IWG1	891 aa		13.29	□□□□□ -0.28
KCNC1-205	ENST00000638366	PI4KAP1	Q8N8J0	262 aa		13.29	□□□□□ -0.28
KCNC1-205	ENST00000638366	FBXW7	Q969H0	707 aa		13.29	□□□□□ -0.28
KCNC1-205	ENST00000638366	IL16	Q14005	1332 aa		13.29	□□□□□ -0.28
KCNC1-205	ENST00000638366	IRS2	Q9Y4H2	1338 aa		13.29	□□□□□ -0.28
KCNC1-205	ENST00000638366	CEP290	O15078	2479 aa		13.29	□□□□□ -0.28
KCNC1-205	ENST00000638366	FKTN	O75072	461 aa		13.28	□□□□□ -0.28
KCNC1-205	ENST00000638366	CWF19L2	Q2TBE0	894 aa	Known RBP	13.28	□□□□□ -0.28
KCNC1-205	ENST00000638366	SPRYD7	Q5W111	196 aa		13.28	□□□□□ -0.28
KCNC1-205	ENST00000638366	KSR2	Q6VAB6	950 aa		13.28	□□□□□ -0.28
KCNC1-205	ENST00000638366	UBE3B	Q7Z3V4	1068 aa		13.28	□□□□□ -0.28
KCNC1-205	ENST00000638366	TSR2	Q969E8	191 aa	Known RBP	13.28	□□□□□ -0.28
KCNC1-205	ENST00000638366	R3HDML	Q9H3Y0	253 aa		13.28	□□□□□ -0.28
KCNC1-205	ENST00000638366	LEMD3	Q9Y2U8	911 aa		13.28	□□□□□ -0.28
KCNC1-205	ENST00000638366	ZNF804B	A4D1E1	1349 aa		13.28	□□□□□ -0.28
KCNC1-205	ENST00000638366	MGAM	O43451	1857 aa		13.27	□□□□□ -0.28
KCNC1-205	ENST00000638366	ZBTB48	P10074	688 aa	Predicted RBP	13.27	□□□□□ -0.29
KCNC1-205	ENST00000638366	NEXN	Q0ZGT2	675 aa		13.27	□□□□□ -0.29
KCNC1-205	ENST00000638366	MAP3K11	Q16584	847 aa		13.27	□□□□□ -0.29
KCNC1-205	ENST00000638366	ARMC9	Q7Z3E5	817 aa		13.27	□□□□□ -0.29
KCNC1-205	ENST00000638366	KIAA0825	Q8IV33	1275 aa		13.27	□□□□□ -0.29
KCNC1-205	ENST00000638366	TSPYL6	Q8N831	410 aa		13.27	□□□□□ -0.29
KCNC1-205	ENST00000638366	PLA2G12B	Q9BX93	195 aa		13.27	□□□□□ -0.29
KCNC1-205	ENST00000638366	CHMP4A	Q9BY43	222 aa		13.27	□□□□□ -0.29
KCNC1-205	ENST00000638366	DOCK2	Q92608	1830 aa		13.27	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms