RNA–Protein interactions for RNA: ENST00000635853.1

SPTAN1-228, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 5,870 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-228ENST00000635853 KIF3CO14782 793 aa11.15□□□□□ -0.63
SPTAN1-228ENST00000635853 ALS2CR12Q96Q35 445 aa11.15□□□□□ -0.63
SPTAN1-228ENST00000635853 ZSCAN16Q9H4T2 348 aaPredicted RBP11.15□□□□□ -0.63
SPTAN1-228ENST00000635853 HYPKQ9NX55 129 aa11.15□□□□□ -0.63
SPTAN1-228ENST00000635853 SWAP70Q9UH65 585 aa11.15□□□□□ -0.63
SPTAN1-228ENST00000635853 ZNF644Q9H582 1327 aaPredicted RBP11.15□□□□□ -0.63
SPTAN1-228ENST00000635853 KIF14Q15058 1648 aa11.14□□□□□ -0.63
SPTAN1-228ENST00000635853 CFAP43Q8NDM7 1665 aa11.14□□□□□ -0.63
SPTAN1-228ENST00000635853 YEATS4O95619 227 aa11.14□□□□□ -0.63
SPTAN1-228ENST00000635853 BRD1O95696 1058 aa11.14□□□□□ -0.63
SPTAN1-228ENST00000635853 SLC8A1P32418 973 aa11.14□□□□□ -0.63
SPTAN1-228ENST00000635853 ATRIPQ8WXE1 791 aa11.14□□□□□ -0.63
SPTAN1-228ENST00000635853 GAPVD1Q14C86 1478 aa11.14□□□□□ -0.63
SPTAN1-228ENST00000635853 FBXO38Q6PIJ6 1188 aa11.14□□□□□ -0.63
SPTAN1-228ENST00000635853 C8orf76Q96K31 380 aa11.14□□□□□ -0.63
SPTAN1-228ENST00000635853 TCP11L1Q9NUJ3 509 aa11.14□□□□□ -0.63
SPTAN1-228ENST00000635853 ZBTB12Q9Y330 459 aaPredicted RBP11.14□□□□□ -0.63
SPTAN1-228ENST00000635853 TMPOP42166 694 aaKnown RBP11.14□□□□□ -0.63
SPTAN1-228ENST00000635853 PPP1R42Q7Z4L9 355 aa11.14□□□□□ -0.63
SPTAN1-228ENST00000635853 USHBP1Q8N6Y0 703 aa11.14□□□□□ -0.63
SPTAN1-228ENST00000635853 TFIP11Q9UBB9 837 aaKnown RBP11.14□□□□□ -0.63
SPTAN1-228ENST00000635853 TSPY2A6NKD2 308 aa11.14□□□□□ -0.63
SPTAN1-228ENST00000635853 RHOXF2BP0C7M4 288 aa11.14□□□□□ -0.63
SPTAN1-228ENST00000635853 LIG3P49916 1009 aa11.14□□□□□ -0.63
SPTAN1-228ENST00000635853 PRPF40BQ6NWY9 871 aaKnown RBP11.14□□□□□ -0.63
SPTAN1-228ENST00000635853 ANKS4BQ8N8V4 417 aa11.14□□□□□ -0.63
SPTAN1-228ENST00000635853 RHOXF2Q9BQY4 288 aa11.14□□□□□ -0.63
SPTAN1-228ENST00000635853 MIS18AQ9NYP9 233 aa11.14□□□□□ -0.63
SPTAN1-228ENST00000635853 SLFN14P0C7P3 912 aa11.14□□□□□ -0.63
SPTAN1-228ENST00000635853 PAFAH1B1P43034 410 aa11.14□□□□□ -0.63
SPTAN1-228ENST00000635853 BOLA2Q9H3K6 86 aa11.14□□□□□ -0.63
SPTAN1-228ENST00000635853 ASXL1Q8IXJ9 1541 aa11.14□□□□□ -0.63
SPTAN1-228ENST00000635853 GOLGA6CA6NDK9 693 aa11.13□□□□□ -0.63
SPTAN1-228ENST00000635853 GOLGA6DP0CG33 693 aa11.13□□□□□ -0.63
SPTAN1-228ENST00000635853 BIRC2Q13490 618 aa11.13□□□□□ -0.63
SPTAN1-228ENST00000635853 CLSTN2Q9H4D0 955 aa11.13□□□□□ -0.63
SPTAN1-228ENST00000635853 GOLGA6AQ9NYA3 693 aa11.13□□□□□ -0.63
SPTAN1-228ENST00000635853 NDUFAB1O14561 156 aa11.13□□□□□ -0.63
SPTAN1-228ENST00000635853 RAB11FIP3O75154 756 aa11.13□□□□□ -0.63
SPTAN1-228ENST00000635853 ATP2C2O75185 946 aa11.13□□□□□ -0.63
SPTAN1-228ENST00000635853 LMOD1P29536 600 aaPredicted RBP11.13□□□□□ -0.63
SPTAN1-228ENST00000635853 DPH6Q7L8W6 267 aa11.13□□□□□ -0.63
SPTAN1-228ENST00000635853 LRRC8AQ8IWT6 810 aa11.13□□□□□ -0.63
SPTAN1-228ENST00000635853 DMRT2Q9Y5R5 561 aa11.13□□□□□ -0.63
SPTAN1-228ENST00000635853 GUCY2CP25092 1073 aa11.13□□□□□ -0.63
SPTAN1-228ENST00000635853 CEP85LQ5SZL2 805 aa11.13□□□□□ -0.63
SPTAN1-228ENST00000635853 JARID2Q92833 1246 aaPredicted RBP11.13□□□□□ -0.63
SPTAN1-228ENST00000635853 IL16Q14005 1332 aa11.13□□□□□ -0.63
SPTAN1-228ENST00000635853 B4DLN1 442 aa11.13□□□□□ -0.63
SPTAN1-228ENST00000635853 IDEP14735 1019 aa11.13□□□□□ -0.63
SPTAN1-228ENST00000635853 CLCN6P51797 869 aa11.13□□□□□ -0.63
SPTAN1-228ENST00000635853 MRPL12P52815 198 aaKnown RBP11.13□□□□□ -0.63
SPTAN1-228ENST00000635853 FAM114A1Q8IWE2 563 aa11.13□□□□□ -0.63
SPTAN1-228ENST00000635853 TBC1D5Q92609 795 aa11.13□□□□□ -0.63
SPTAN1-228ENST00000635853 ESYT1Q9BSJ8 1104 aa11.13□□□□□ -0.63
SPTAN1-228ENST00000635853 MED4Q9NPJ6 270 aa11.13□□□□□ -0.63
SPTAN1-228ENST00000635853 DISP3Q9P2K9 1392 aa11.13□□□□□ -0.63
SPTAN1-228ENST00000635853 MAATS1Q7Z4T9 603 aa11.12□□□□□ -0.63
SPTAN1-228ENST00000635853 CABS1Q96KC9 395 aa11.12□□□□□ -0.63
SPTAN1-228ENST00000635853 CFAP57Q96MR6 1250 aa11.12□□□□□ -0.63
SPTAN1-228ENST00000635853 LRRC27Q9C0I9 530 aa11.12□□□□□ -0.63
SPTAN1-228ENST00000635853 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.12□□□□□ -0.63
SPTAN1-228ENST00000635853 PIK3C2GO75747 1445 aa11.12□□□□□ -0.63
SPTAN1-228ENST00000635853 PNMA6AP0CW24 399 aaPredicted RBP11.12□□□□□ -0.63
SPTAN1-228ENST00000635853 GUCY1B3Q02153 619 aa11.12□□□□□ -0.63
SPTAN1-228ENST00000635853 ERMNQ8TAM6 284 aa11.12□□□□□ -0.63
SPTAN1-228ENST00000635853 KIF1BPQ96EK5 621 aa11.12□□□□□ -0.63
SPTAN1-228ENST00000635853 NAA15Q9BXJ9 866 aaKnown RBP11.12□□□□□ -0.63
SPTAN1-228ENST00000635853 TTF1Q15361 905 aaPredicted RBP11.12□□□□□ -0.63
SPTAN1-228ENST00000635853 SNCBQ16143 134 aa11.12□□□□□ -0.63
SPTAN1-228ENST00000635853 AMOTQ4VCS5 1084 aa11.12□□□□□ -0.63
SPTAN1-228ENST00000635853 C6orf163Q5TEZ5 329 aa11.12□□□□□ -0.63
SPTAN1-228ENST00000635853 NBPF6Q5VWK0 638 aa11.12□□□□□ -0.63
SPTAN1-228ENST00000635853 APBB1IPQ7Z5R6 666 aaPredicted RBP11.12□□□□□ -0.63
SPTAN1-228ENST00000635853 NBPF5PQ86XG9 351 aaPredicted RBP11.12□□□□□ -0.63
SPTAN1-228ENST00000635853 NBPF4Q96M43 638 aa11.12□□□□□ -0.63
SPTAN1-228ENST00000635853 NSRP1Q9H0G5 558 aaKnown RBP11.12□□□□□ -0.63
SPTAN1-228ENST00000635853 SLC12A5Q9H2X9 1139 aa11.12□□□□□ -0.63
SPTAN1-228ENST00000635853 F8W031 263 aaPredicted RBP11.12□□□□□ -0.63
SPTAN1-228ENST00000635853 USP37Q86T82 979 aa11.12□□□□□ -0.63
SPTAN1-228ENST00000635853 OGFOD1Q8N543 542 aa11.12□□□□□ -0.63
SPTAN1-228ENST00000635853 CPLX3Q8WVH0 158 aa11.12□□□□□ -0.63
SPTAN1-228ENST00000635853 N4BP2L2Q92802 583 aaPredicted RBP11.12□□□□□ -0.63
SPTAN1-228ENST00000635853 BEGAINQ9BUH8 593 aa11.12□□□□□ -0.63
SPTAN1-228ENST00000635853 EIF3CLB5ME19 914 aaKnown RBP11.12□□□□□ -0.63
SPTAN1-228ENST00000635853 SPECC1Q5M775 1068 aa11.12□□□□□ -0.63
SPTAN1-228ENST00000635853 CLEC17AQ6ZS10 378 aa11.12□□□□□ -0.63
SPTAN1-228ENST00000635853 LMNTD2Q8IXW0 634 aa11.12□□□□□ -0.63
SPTAN1-228ENST00000635853 RPUSD2Q8IZ73 545 aaKnown RBP11.12□□□□□ -0.63
SPTAN1-228ENST00000635853 EIF3CQ99613 913 aaKnown RBP11.12□□□□□ -0.63
SPTAN1-228ENST00000635853 RBM26Q5T8P6 1007 aaKnown RBP11.11□□□□□ -0.63
SPTAN1-228ENST00000635853 NBPF14Q5TI25 921 aa11.11□□□□□ -0.63
SPTAN1-228ENST00000635853 CNNM3Q8NE01 707 aa11.11□□□□□ -0.63
SPTAN1-228ENST00000635853 IFNKQ9P0W0 207 aa11.11□□□□□ -0.63
SPTAN1-228ENST00000635853 KIF4AO95239 1232 aa11.11□□□□□ -0.63
SPTAN1-228ENST00000635853 IRX1P78414 480 aaPredicted RBP11.11□□□□□ -0.63
SPTAN1-228ENST00000635853 HLTFQ14527 1009 aaKnown RBP eCLIP11.11□□□□□ -0.633e-8■■□□□ 13.7
SPTAN1-228ENST00000635853 ISM2Q6H9L7 571 aa11.11□□□□□ -0.63
SPTAN1-228ENST00000635853 CCDC144CPQ8IYA2 1237 aa11.11□□□□□ -0.63
SPTAN1-228ENST00000635853 ARHGAP45Q92619 1136 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms