RNA–Protein interactions for RNA: ENST00000626631.1

TCF4-256, Transcript of transcription factor 4, human

TSL 2

Gene TCF4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-256	ENST00000626631	EYA3	Q99504	573 aa		10.23	□□□□□ -0.77
TCF4-256	ENST00000626631	SEC31B	Q9NQW1	1179 aa		10.23	□□□□□ -0.77
TCF4-256	ENST00000626631	MBIP	Q9NS73	344 aa		10.23	□□□□□ -0.77
TCF4-256	ENST00000626631	SLC34A2	O95436	690 aa		10.22	□□□□□ -0.77
TCF4-256	ENST00000626631	ZNF280A	P59817	542 aa	Predicted RBP	10.22	□□□□□ -0.77
TCF4-256	ENST00000626631	RBM26	Q5T8P6	1007 aa	Known RBP	10.22	□□□□□ -0.77
TCF4-256	ENST00000626631	C2orf69	Q8N8R5	385 aa		10.22	□□□□□ -0.77
TCF4-256	ENST00000626631	CCDC102A	Q96A19	550 aa		10.22	□□□□□ -0.77
TCF4-256	ENST00000626631	DCPS	Q96C86	337 aa	Known RBP	10.22	□□□□□ -0.77
TCF4-256	ENST00000626631	ZC3H12C	Q9C0D7	883 aa	Known RBP	10.22	□□□□□ -0.77
TCF4-256	ENST00000626631	PHAX	Q9H814	394 aa	Known RBP	10.22	□□□□□ -0.77
TCF4-256	ENST00000626631	GBA2	Q9HCG7	927 aa	Predicted RBP	10.22	□□□□□ -0.77
TCF4-256	ENST00000626631	ADM5	C9JUS6	153 aa		10.21	□□□□□ -0.77
TCF4-256	ENST00000626631	PCCA	P05165	728 aa	Predicted RBP	10.21	□□□□□ -0.77
TCF4-256	ENST00000626631	KIF23	Q02241	960 aa	Predicted RBP	10.21	□□□□□ -0.77
TCF4-256	ENST00000626631	DDX10	Q13206	875 aa	Known RBP	10.21	□□□□□ -0.77
TCF4-256	ENST00000626631	DGKZ	Q13574	1117 aa		10.21	□□□□□ -0.77
TCF4-256	ENST00000626631	RIC3	Q7Z5B4	369 aa		10.21	□□□□□ -0.77
TCF4-256	ENST00000626631	CCDC191	Q8NCU4	936 aa		10.21	□□□□□ -0.77
TCF4-256	ENST00000626631	GML	Q99445	158 aa		10.21	□□□□□ -0.77
TCF4-256	ENST00000626631	SAGE1	Q9NXZ1	904 aa		10.21	□□□□□ -0.77
TCF4-256	ENST00000626631	ASTN2	O75129	1339 aa	Predicted RBP	10.21	□□□□□ -0.78
TCF4-256	ENST00000626631	ZNF609	O15014	1411 aa		10.2	□□□□□ -0.78
TCF4-256	ENST00000626631	HSP90B1	P14625	803 aa	Known RBP	10.2	□□□□□ -0.78
TCF4-256	ENST00000626631	ZNF157	P51786	506 aa	Predicted RBP	10.2	□□□□□ -0.78
TCF4-256	ENST00000626631	WDR43	Q15061	677 aa	Known RBP eCLIP	10.2	□□□□□ -0.78
TCF4-256	ENST00000626631	SCN9A	Q15858	1988 aa		10.2	□□□□□ -0.78
TCF4-256	ENST00000626631	KIF4B	Q2VIQ3	1234 aa		10.2	□□□□□ -0.78
TCF4-256	ENST00000626631	RSBN1L	Q6PCB5	846 aa	Predicted RBP	10.2	□□□□□ -0.78
TCF4-256	ENST00000626631	AGBL3	Q8NEM8	1001 aa		10.2	□□□□□ -0.78
TCF4-256	ENST00000626631	CSRNP1	Q96S65	589 aa		10.2	□□□□□ -0.78
TCF4-256	ENST00000626631	GGA1	Q9UJY5	639 aa		10.2	□□□□□ -0.78
TCF4-256	ENST00000626631	PDE8A	O60658	829 aa		10.19	□□□□□ -0.78
TCF4-256	ENST00000626631	UFL1	O94874	794 aa		10.19	□□□□□ -0.78
TCF4-256	ENST00000626631	SLC10A3	P09131	477 aa		10.19	□□□□□ -0.78
TCF4-256	ENST00000626631	GOLGA2	Q08379	1002 aa		10.19	□□□□□ -0.78
TCF4-256	ENST00000626631	SCARF1	Q14162	830 aa		10.19	□□□□□ -0.78
TCF4-256	ENST00000626631	CCDC152	Q4G0S7	254 aa		10.19	□□□□□ -0.78
TCF4-256	ENST00000626631	SULF1	Q8IWU6	871 aa		10.19	□□□□□ -0.78
TCF4-256	ENST00000626631	C8orf58	Q8NAV2	365 aa		10.19	□□□□□ -0.78
TCF4-256	ENST00000626631	JARID2	Q92833	1246 aa	Predicted RBP	10.19	□□□□□ -0.78
TCF4-256	ENST00000626631	CDCA5	Q96FF9	252 aa		10.19	□□□□□ -0.78
TCF4-256	ENST00000626631	MYD88	Q99836	296 aa		10.19	□□□□□ -0.78
TCF4-256	ENST00000626631	IFT57	Q9NWB7	429 aa		10.19	□□□□□ -0.78
TCF4-256	ENST00000626631	RNF186	Q9NXI6	227 aa		10.19	□□□□□ -0.78
TCF4-256	ENST00000626631	GGA3	Q9NZ52	723 aa		10.19	□□□□□ -0.78
TCF4-256	ENST00000626631	ANKIB1	Q9P2G1	1089 aa		10.19	□□□□□ -0.78
TCF4-256	ENST00000626631	PCDHB13	Q9Y5F0	798 aa		10.19	□□□□□ -0.78
TCF4-256	ENST00000626631	WTIP	A6NIX2	430 aa	Predicted RBP	10.18	□□□□□ -0.78
TCF4-256	ENST00000626631	ELL2	O00472	640 aa	Predicted RBP	10.18	□□□□□ -0.78
TCF4-256	ENST00000626631	APAF1	O14727	1248 aa		10.18	□□□□□ -0.78
TCF4-256	ENST00000626631	TRPA1	O75762	1119 aa		10.18	□□□□□ -0.78
TCF4-256	ENST00000626631	GNAI1	P63096	354 aa		10.18	□□□□□ -0.78
TCF4-256	ENST00000626631	METTL22	Q9BUU2	404 aa	Predicted RBP	10.18	□□□□□ -0.78
TCF4-256	ENST00000626631	CWC25	Q9NXE8	425 aa	Predicted RBP	10.18	□□□□□ -0.78
TCF4-256	ENST00000626631	PDE4DIP	Q5VU43	2346 aa		10.18	□□□□□ -0.78
TCF4-256	ENST00000626631	XDH	P47989	1333 aa		10.17	□□□□□ -0.78
TCF4-256	ENST00000626631	PITPNM2	Q9BZ72	1349 aa		10.17	□□□□□ -0.78
TCF4-256	ENST00000626631	ANGEL2	Q5VTE6	544 aa	Known RBP	10.17	□□□□□ -0.78
TCF4-256	ENST00000626631	PODN	Q7Z5L7	613 aa		10.17	□□□□□ -0.78
TCF4-256	ENST00000626631	MYOZ2	Q9NPC6	264 aa		10.17	□□□□□ -0.78
TCF4-256	ENST00000626631	USP17L3	A6NCW0	530 aa		10.16	□□□□□ -0.78
TCF4-256	ENST00000626631	USP17L4	A6NCW7	530 aa		10.16	□□□□□ -0.78
TCF4-256	ENST00000626631		G3V3G9	751 aa		10.16	□□□□□ -0.78
TCF4-256	ENST00000626631	IGKV5-2	P06315	115 aa		10.16	□□□□□ -0.78
TCF4-256	ENST00000626631	USP17L8	P0C7I0	530 aa		10.16	□□□□□ -0.78
TCF4-256	ENST00000626631	ATP2B4	P23634	1241 aa		10.16	□□□□□ -0.78
TCF4-256	ENST00000626631	FKBP1B	P68106	108 aa		10.16	□□□□□ -0.78
TCF4-256	ENST00000626631	CALD1	Q05682	793 aa	Known RBP	10.16	□□□□□ -0.78
TCF4-256	ENST00000626631	DCAF8	Q5TAQ9	597 aa		10.16	□□□□□ -0.78
TCF4-256	ENST00000626631	USP17L1	Q7RTZ2	530 aa		10.16	□□□□□ -0.78
TCF4-256	ENST00000626631	RASAL3	Q86YV0	1011 aa		10.16	□□□□□ -0.78
TCF4-256	ENST00000626631	ANKRD18A	Q8IVF6	992 aa		10.16	□□□□□ -0.78
TCF4-256	ENST00000626631	MIER1	Q8N108	512 aa		10.16	□□□□□ -0.78
TCF4-256	ENST00000626631	TTLL11	Q8NHH1	800 aa		10.16	□□□□□ -0.78
TCF4-256	ENST00000626631	CCDC85A	Q96PX6	553 aa	Predicted RBP	10.16	□□□□□ -0.78
TCF4-256	ENST00000626631	PRKRIP1	Q9H875	184 aa	Predicted RBP	10.16	□□□□□ -0.78
TCF4-256	ENST00000626631	BSDC1	Q9NW68	430 aa	Predicted RBP	10.16	□□□□□ -0.78
TCF4-256	ENST00000626631	MINPP1	Q9UNW1	487 aa		10.16	□□□□□ -0.78
TCF4-256	ENST00000626631	CTSW	P56202	376 aa		10.15	□□□□□ -0.78
TCF4-256	ENST00000626631	CCDC30	Q5VVM6	783 aa		10.15	□□□□□ -0.78
TCF4-256	ENST00000626631	KSR2	Q6VAB6	950 aa		10.15	□□□□□ -0.78
TCF4-256	ENST00000626631	TSPYL6	Q8N831	410 aa		10.15	□□□□□ -0.78
TCF4-256	ENST00000626631	CHMP4A	Q9BY43	222 aa		10.15	□□□□□ -0.78
TCF4-256	ENST00000626631	MAP3K2	Q9Y2U5	619 aa		10.15	□□□□□ -0.78
TCF4-256	ENST00000626631	HTT	P42858	3142 aa		10.15	□□□□□ -0.79
TCF4-256	ENST00000626631	PSME4	Q14997	1843 aa		10.14	□□□□□ -0.79
TCF4-256	ENST00000626631	PI4KAP2	A4QPH2	592 aa		10.14	□□□□□ -0.79
TCF4-256	ENST00000626631		H7C1W4	665 aa		10.14	□□□□□ -0.79
TCF4-256	ENST00000626631	DDX58	O95786	925 aa	Known RBP	10.14	□□□□□ -0.79
TCF4-256	ENST00000626631	EMP3	P54852	163 aa		10.14	□□□□□ -0.79
TCF4-256	ENST00000626631	NBPF9	Q3BBW0	867 aa		10.14	□□□□□ -0.79
TCF4-256	ENST00000626631	DACT2	Q5SW24	774 aa		10.14	□□□□□ -0.79
TCF4-256	ENST00000626631	MOB2	Q70IA6	237 aa		10.14	□□□□□ -0.79
TCF4-256	ENST00000626631	PI4KAP1	Q8N8J0	262 aa		10.14	□□□□□ -0.79
TCF4-256	ENST00000626631	CDC5L	Q99459	802 aa	Known RBP	10.14	□□□□□ -0.79
TCF4-256	ENST00000626631	TMEM106C	Q9BVX2	250 aa		10.14	□□□□□ -0.79
TCF4-256	ENST00000626631	GREM2	Q9H772	168 aa		10.14	□□□□□ -0.79
TCF4-256	ENST00000626631	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	10.14	□□□□□ -0.79
TCF4-256	ENST00000626631	SCAF8	Q9UPN6	1271 aa	Known RBP	10.14	□□□□□ -0.79

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