RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 PODNQ7Z5L7 613 aa22.75■■□□□ 1.23
LITAF-220ENST00000620789 COA1Q9GZY4 146 aa22.75■■□□□ 1.23
LITAF-220ENST00000620789 CHMP4BQ9H444 224 aaKnown RBP22.75■■□□□ 1.23
LITAF-220ENST00000620789 SCN4AP35499 1836 aa22.74■■□□□ 1.23
LITAF-220ENST00000620789 PDE8BO95263 885 aa22.74■■□□□ 1.23
LITAF-220ENST00000620789 ATP8B2P98198 1209 aa22.74■■□□□ 1.23
LITAF-220ENST00000620789 SCN9AQ15858 1988 aa22.74■■□□□ 1.23
LITAF-220ENST00000620789 IQCA1LA6NCM1 817 aa22.73■■□□□ 1.23
LITAF-220ENST00000620789 IL15P40933 162 aaPredicted RBP22.73■■□□□ 1.23
LITAF-220ENST00000620789 KCNQ5Q9NR82 932 aa22.73■■□□□ 1.23
LITAF-220ENST00000620789 ZBTB40Q9NUA8 1239 aa22.73■■□□□ 1.23
LITAF-220ENST00000620789 PSMD14O00487 310 aa22.72■■□□□ 1.23
LITAF-220ENST00000620789 POLA2Q14181 598 aa22.72■■□□□ 1.23
LITAF-220ENST00000620789 SSH3Q8TE77 659 aa22.72■■□□□ 1.23
LITAF-220ENST00000620789 PSME4Q14997 1843 aa22.72■■□□□ 1.23
LITAF-220ENST00000620789 SCNN1DP51172 638 aa22.71■■□□□ 1.23
LITAF-220ENST00000620789 PUM3Q15397 648 aaKnown RBP22.71■■□□□ 1.23
LITAF-220ENST00000620789 CEP85Q6P2H3 762 aa22.71■■□□□ 1.23
LITAF-220ENST00000620789 ZNF804AQ7Z570 1209 aa22.71■■□□□ 1.23
LITAF-220ENST00000620789 HACL1Q9UJ83 578 aa22.71■■□□□ 1.23
LITAF-220ENST00000620789 GMPSP49915 693 aaPredicted RBP22.7■■□□□ 1.22
LITAF-220ENST00000620789 C16orf71Q8IYS4 520 aaPredicted RBP22.7■■□□□ 1.22
LITAF-220ENST00000620789 CD209Q9NNX6 404 aa22.7■■□□□ 1.22
LITAF-220ENST00000620789 CEP126Q9P2H0 1117 aa22.7■■□□□ 1.22
LITAF-220ENST00000620789 VIL1P09327 827 aaKnown RBP22.69■■□□□ 1.22
LITAF-220ENST00000620789 FGFR2P21802 821 aa22.69■■□□□ 1.22
LITAF-220ENST00000620789 LMOD1P29536 600 aaPredicted RBP22.69■■□□□ 1.22
LITAF-220ENST00000620789 TAF1DQ9H5J8 278 aaPredicted RBP22.69■■□□□ 1.22
LITAF-220ENST00000620789 USP17L3A6NCW0 530 aa22.68■■□□□ 1.22
LITAF-220ENST00000620789 USP17L4A6NCW7 530 aa22.68■■□□□ 1.22
LITAF-220ENST00000620789 TOMM70O94826 608 aa22.68■■□□□ 1.22
LITAF-220ENST00000620789 USP17L1Q7RTZ2 530 aa22.68■■□□□ 1.22
LITAF-220ENST00000620789 GPRC5DQ9NZD1 345 aa22.68■■□□□ 1.22
LITAF-220ENST00000620789 ZNF646O15015 1829 aaPredicted RBP22.67■■□□□ 1.22
LITAF-220ENST00000620789 IL1R1P14778 569 aa22.67■■□□□ 1.22
LITAF-220ENST00000620789 RPS12P25398 132 aaKnown RBP22.67■■□□□ 1.22
LITAF-220ENST00000620789 EPHX2P34913 555 aa22.67■■□□□ 1.22
LITAF-220ENST00000620789 GYG1P46976 350 aa22.67■■□□□ 1.22
LITAF-220ENST00000620789 LPIN2Q92539 896 aa22.67■■□□□ 1.22
LITAF-220ENST00000620789 DPF2Q92785 391 aa22.67■■□□□ 1.22
LITAF-220ENST00000620789 FAM84BQ96KN1 310 aaPredicted RBP22.67■■□□□ 1.22
LITAF-220ENST00000620789 ZBTB12Q9Y330 459 aaPredicted RBP22.67■■□□□ 1.22
LITAF-220ENST00000620789 ZNF609O15014 1411 aa22.66■■□□□ 1.22
LITAF-220ENST00000620789 IFIT1P09914 478 aaKnown RBP22.66■■□□□ 1.22
LITAF-220ENST00000620789 SLC5A1P13866 664 aa22.66■■□□□ 1.22
LITAF-220ENST00000620789 HIBADHP31937 336 aaKnown RBP22.66■■□□□ 1.22
LITAF-220ENST00000620789 EPS15P42566 896 aa22.66■■□□□ 1.22
LITAF-220ENST00000620789 G3BP1Q13283 466 aaKnown RBP eCLIP22.66■■□□□ 1.22
LITAF-220ENST00000620789 RSBN1LQ6PCB5 846 aaPredicted RBP22.66■■□□□ 1.22
LITAF-220ENST00000620789 RPAP2Q8IXW5 612 aaPredicted RBP22.66■■□□□ 1.22
LITAF-220ENST00000620789 ATP2B3Q16720 1220 aa22.65■■□□□ 1.22
LITAF-220ENST00000620789 CAVIN4Q5BKX8 364 aa22.65■■□□□ 1.22
LITAF-220ENST00000620789 STRIP1Q5VSL9 837 aa22.65■■□□□ 1.22
LITAF-220ENST00000620789 RBM46Q8TBY0 533 aaKnown RBP22.65■■□□□ 1.22
LITAF-220ENST00000620789 SURF6O75683 361 aaKnown RBP22.64■■□□□ 1.21
LITAF-220ENST00000620789 TFCP2Q12800 502 aa22.64■■□□□ 1.21
LITAF-220ENST00000620789 DACT2Q5SW24 774 aa22.64■■□□□ 1.21
LITAF-220ENST00000620789 FBXO33Q7Z6M2 555 aa22.64■■□□□ 1.21
LITAF-220ENST00000620789 FBXW7Q969H0 707 aa22.64■■□□□ 1.21
LITAF-220ENST00000620789 NOP58Q9Y2X3 529 aaKnown RBP22.64■■□□□ 1.21
LITAF-220ENST00000620789 GTF2IP78347 998 aa22.63■■□□□ 1.21
LITAF-220ENST00000620789 TTLL5Q6EMB2 1281 aa22.63■■□□□ 1.21
LITAF-220ENST00000620789 PNMA8AQ86V59 439 aaPredicted RBP22.63■■□□□ 1.21
LITAF-220ENST00000620789 VPS37DQ86XT2 251 aa22.63■■□□□ 1.21
LITAF-220ENST00000620789 AGBL3Q8NEM8 1001 aa22.63■■□□□ 1.21
LITAF-220ENST00000620789 TDRD7Q8NHU6 1098 aaKnown RBP22.63■■□□□ 1.21
LITAF-220ENST00000620789 ADARB2Q9NS39 739 aaKnown RBP22.63■■□□□ 1.21
LITAF-220ENST00000620789 CNOT7Q9UIV1 285 aaKnown RBP22.63■■□□□ 1.21
LITAF-220ENST00000620789 ARAP2Q8WZ64 1704 aa22.62■■□□□ 1.21
LITAF-220ENST00000620789 C1QTNF8P60827 252 aa22.62■■□□□ 1.21
LITAF-220ENST00000620789 OS9Q13438 667 aaPredicted RBP22.62■■□□□ 1.21
LITAF-220ENST00000620789 EAPPQ56P03 285 aaPredicted RBP22.62■■□□□ 1.21
LITAF-220ENST00000620789 SIRT2Q8IXJ6 389 aa22.62■■□□□ 1.21
LITAF-220ENST00000620789 MICALL2Q8IY33 904 aa22.62■■□□□ 1.21
LITAF-220ENST00000620789 GMLQ99445 158 aa22.62■■□□□ 1.21
LITAF-220ENST00000620789 AKAP2Q9Y2D5 859 aa22.62■■□□□ 1.21
LITAF-220ENST00000620789 MYO3BQ8WXR4 1341 aa22.61■■□□□ 1.21
LITAF-220ENST00000620789 ADAMTSL1Q8N6G6 1762 aa22.61■■□□□ 1.21
LITAF-220ENST00000620789 HMMRO75330 724 aa22.61■■□□□ 1.21
LITAF-220ENST00000620789 SASH1O94885 1247 aa22.61■■□□□ 1.21
LITAF-220ENST00000620789 POTEIP0CG38 1075 aa22.61■■□□□ 1.21
LITAF-220ENST00000620789 POTEJP0CG39 1038 aa22.61■■□□□ 1.21
LITAF-220ENST00000620789 BCAMP50895 628 aa22.61■■□□□ 1.21
LITAF-220ENST00000620789 USP50Q70EL3 339 aaPredicted RBP22.61■■□□□ 1.21
LITAF-220ENST00000620789 MXD3Q9BW11 206 aa22.61■■□□□ 1.21
LITAF-220ENST00000620789 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.61■■□□□ 1.21
LITAF-220ENST00000620789 SHTN1A0MZ66 631 aa22.6■■□□□ 1.21
LITAF-220ENST00000620789 H7C1D1 291 aa22.6■■□□□ 1.21
LITAF-220ENST00000620789 LDHDQ86WU2 507 aa22.6■■□□□ 1.21
LITAF-220ENST00000620789 SMC1BQ8NDV3 1235 aa22.6■■□□□ 1.21
LITAF-220ENST00000620789 CRBNQ96SW2 442 aa22.6■■□□□ 1.21
LITAF-220ENST00000620789 A0A1B0GUL7 405 aa22.59■■□□□ 1.21
LITAF-220ENST00000620789 FAM205AQ6ZU69 1335 aa22.58■■□□□ 1.21
LITAF-220ENST00000620789 USP17L8P0C7I0 530 aa22.58■■□□□ 1.21
LITAF-220ENST00000620789 TIMM10P62072 90 aa22.58■■□□□ 1.21
LITAF-220ENST00000620789 FSTL1Q12841 308 aa22.58■■□□□ 1.21
LITAF-220ENST00000620789 IQSEC3Q9UPP2 1182 aaPredicted RBP22.58■■□□□ 1.21
LITAF-220ENST00000620789 EXOC6BQ9Y2D4 811 aa22.58■■□□□ 1.21
LITAF-220ENST00000620789 SUPT16HQ9Y5B9 1047 aaKnown RBP22.58■■□□□ 1.21
LITAF-220ENST00000620789 FRAT2O75474 233 aaPredicted RBP22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms