RNA–Protein interactions for RNA: ENST00000619146.1

SYN3-213, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-213ENST00000619146 SSH1Q8WYL5 1049 aa11.7□□□□□ -0.54
SYN3-213ENST00000619146 JARID2Q92833 1246 aaPredicted RBP11.7□□□□□ -0.54
SYN3-213ENST00000619146 CCDC85AQ96PX6 553 aaPredicted RBP11.7□□□□□ -0.54
SYN3-213ENST00000619146 STK31Q9BXU1 1019 aa11.7□□□□□ -0.54
SYN3-213ENST00000619146 CHPF2Q9P2E5 772 aa11.7□□□□□ -0.54
SYN3-213ENST00000619146 RBBP6Q7Z6E9 1792 aaKnown RBP11.69□□□□□ -0.54
SYN3-213ENST00000619146 KIF16BQ96L93 1317 aa11.69□□□□□ -0.54
SYN3-213ENST00000619146 UFL1O94874 794 aa11.69□□□□□ -0.54
SYN3-213ENST00000619146 RRP1P56182 461 aaKnown RBP11.69□□□□□ -0.54
SYN3-213ENST00000619146 PRKG1Q13976 671 aa11.69□□□□□ -0.54
SYN3-213ENST00000619146 TTLL12Q14166 644 aaPredicted RBP11.69□□□□□ -0.54
SYN3-213ENST00000619146 TBC1D16Q8TBP0 767 aa11.69□□□□□ -0.54
SYN3-213ENST00000619146 SEC31BQ9NQW1 1179 aa11.69□□□□□ -0.54
SYN3-213ENST00000619146 BCAR3O75815 825 aa11.68□□□□□ -0.54
SYN3-213ENST00000619146 RPS12P25398 132 aaKnown RBP11.68□□□□□ -0.54
SYN3-213ENST00000619146 EYA3Q99504 573 aa11.68□□□□□ -0.54
SYN3-213ENST00000619146 MXD3Q9BW11 206 aa11.68□□□□□ -0.54
SYN3-213ENST00000619146 ZC3H12CQ9C0D7 883 aaKnown RBP11.68□□□□□ -0.54
SYN3-213ENST00000619146 ZSWIM8A7E2V4 1837 aa11.67□□□□□ -0.54
SYN3-213ENST00000619146 OTOFQ9HC10 1997 aa11.67□□□□□ -0.54
SYN3-213ENST00000619146 WTIPA6NIX2 430 aaPredicted RBP11.67□□□□□ -0.54
SYN3-213ENST00000619146 MS4A1P11836 297 aa11.67□□□□□ -0.54
SYN3-213ENST00000619146 TMC4Q7Z404 712 aa11.67□□□□□ -0.54
SYN3-213ENST00000619146 MRPL50Q8N5N7 158 aaKnown RBP11.67□□□□□ -0.54
SYN3-213ENST00000619146 ARHGAP45Q92619 1136 aa11.67□□□□□ -0.54
SYN3-213ENST00000619146 FBXW7Q969H0 707 aa11.67□□□□□ -0.54
SYN3-213ENST00000619146 R3HDMLQ9H3Y0 253 aa11.67□□□□□ -0.54
SYN3-213ENST00000619146 ANKIB1Q9P2G1 1089 aa11.67□□□□□ -0.54
SYN3-213ENST00000619146 DBF4Q9UBU7 674 aaPredicted RBP11.67□□□□□ -0.54
SYN3-213ENST00000619146 A0A1B0GUL6 1792 aa11.67□□□□□ -0.54
SYN3-213ENST00000619146 LAMB1P07942 1786 aa11.67□□□□□ -0.54
SYN3-213ENST00000619146 TRIOBPQ9H2D6 2365 aa11.66□□□□□ -0.54
SYN3-213ENST00000619146 IRS4O14654 1257 aaPredicted RBP11.66□□□□□ -0.54
SYN3-213ENST00000619146 SLC4A2P04920 1241 aa11.66□□□□□ -0.54
SYN3-213ENST00000619146 VIL1P09327 827 aaKnown RBP11.66□□□□□ -0.54
SYN3-213ENST00000619146 ZKSCAN2Q63HK3 967 aa11.66□□□□□ -0.54
SYN3-213ENST00000619146 FZD1Q9UP38 647 aa11.66□□□□□ -0.54
SYN3-213ENST00000619146 BRCA2P51587 3418 aa11.66□□□□□ -0.54
SYN3-213ENST00000619146 PTPRCP08575 1304 aa11.65□□□□□ -0.54
SYN3-213ENST00000619146 RPS8P62241 208 aaKnown RBP11.65□□□□□ -0.54
SYN3-213ENST00000619146 PDE3AQ14432 1141 aa11.65□□□□□ -0.54
SYN3-213ENST00000619146 SF3B3Q15393 1217 aaKnown RBP11.65□□□□□ -0.54
SYN3-213ENST00000619146 NBPF9Q3BBW0 867 aa11.65□□□□□ -0.54
SYN3-213ENST00000619146 RSBN1LQ6PCB5 846 aaPredicted RBP11.65□□□□□ -0.54
SYN3-213ENST00000619146 ANKRD13DQ6ZTN6 518 aa11.65□□□□□ -0.54
SYN3-213ENST00000619146 FRAT1Q92837 279 aaPredicted RBP11.65□□□□□ -0.54
SYN3-213ENST00000619146 ISCA1Q9BUE6 129 aa11.65□□□□□ -0.54
SYN3-213ENST00000619146 API5Q9BZZ5 524 aaKnown RBP11.65□□□□□ -0.54
SYN3-213ENST00000619146 MYOZ2Q9NPC6 264 aa11.65□□□□□ -0.54
SYN3-213ENST00000619146 HYPKQ9NX55 129 aa11.65□□□□□ -0.54
SYN3-213ENST00000619146 GPR25O00155 361 aa11.64□□□□□ -0.55
SYN3-213ENST00000619146 ATF7IPQ6VMQ6 1270 aa11.64□□□□□ -0.55
SYN3-213ENST00000619146 PLBD2Q8NHP8 589 aa11.64□□□□□ -0.55
SYN3-213ENST00000619146 GGA1Q9UJY5 639 aa11.64□□□□□ -0.55
SYN3-213ENST00000619146 NOB1Q9ULX3 412 aaKnown RBP11.64□□□□□ -0.55
SYN3-213ENST00000619146 SASH1O94885 1247 aa11.63□□□□□ -0.55
SYN3-213ENST00000619146 USP17L8P0C7I0 530 aa11.63□□□□□ -0.55
SYN3-213ENST00000619146 ZNF280AP59817 542 aaPredicted RBP11.63□□□□□ -0.55
SYN3-213ENST00000619146 AK9Q5TCS8 1911 aa11.62□□□□□ -0.55
SYN3-213ENST00000619146 POTEFA5A3E0 1075 aa11.62□□□□□ -0.55
SYN3-213ENST00000619146 PLIN1O60240 522 aa11.62□□□□□ -0.55
SYN3-213ENST00000619146 ERICH6BQ5W0A0 696 aa11.62□□□□□ -0.55
SYN3-213ENST00000619146 FBXO46Q6PJ61 603 aaPredicted RBP11.62□□□□□ -0.55
SYN3-213ENST00000619146 FTSJ3Q8IY81 847 aaKnown RBP11.62□□□□□ -0.55
SYN3-213ENST00000619146 FKTNO75072 461 aa11.61□□□□□ -0.55
SYN3-213ENST00000619146 DDX58O95786 925 aaKnown RBP11.61□□□□□ -0.55
SYN3-213ENST00000619146 TRIM27P14373 513 aa11.61□□□□□ -0.55
SYN3-213ENST00000619146 PTPN12Q05209 780 aaKnown RBP11.61□□□□□ -0.55
SYN3-213ENST00000619146 FLIIQ13045 1269 aa11.61□□□□□ -0.55
SYN3-213ENST00000619146 PKN2Q16513 984 aaKnown RBP11.61□□□□□ -0.55
SYN3-213ENST00000619146 RIC3Q7Z5B4 369 aa11.61□□□□□ -0.55
SYN3-213ENST00000619146 DZIP1LQ8IYY4 767 aaKnown RBP11.61□□□□□ -0.55
SYN3-213ENST00000619146 AGBL3Q8NEM8 1001 aa11.61□□□□□ -0.55
SYN3-213ENST00000619146 MYD88Q99836 296 aa11.61□□□□□ -0.55
SYN3-213ENST00000619146 PHAXQ9H814 394 aaKnown RBP11.61□□□□□ -0.55
SYN3-213ENST00000619146 USP17L3A6NCW0 530 aa11.6□□□□□ -0.55
SYN3-213ENST00000619146 USP17L4A6NCW7 530 aa11.6□□□□□ -0.55
SYN3-213ENST00000619146 TM4SF4P48230 202 aa11.6□□□□□ -0.55
SYN3-213ENST00000619146 FKBP5Q13451 457 aaPredicted RBP11.6□□□□□ -0.55
SYN3-213ENST00000619146 HABP4Q5JVS0 413 aaKnown RBP11.6□□□□□ -0.55
SYN3-213ENST00000619146 USP17L1Q7RTZ2 530 aa11.6□□□□□ -0.55
SYN3-213ENST00000619146 REM2Q8IYK8 340 aaPredicted RBP11.6□□□□□ -0.55
SYN3-213ENST00000619146 GMLQ99445 158 aa11.6□□□□□ -0.55
SYN3-213ENST00000619146 PODXL2Q9NZ53 605 aa11.6□□□□□ -0.55
SYN3-213ENST00000619146 TRIM17Q9Y577 477 aa11.6□□□□□ -0.55
SYN3-213ENST00000619146 FKBP1BP68106 108 aa11.59□□□□□ -0.55
SYN3-213ENST00000619146 G2E3Q7L622 706 aa11.59□□□□□ -0.55
SYN3-213ENST00000619146 CHMP4BQ9H444 224 aaKnown RBP11.59□□□□□ -0.55
SYN3-213ENST00000619146 ANGEL1Q9UNK9 670 aaKnown RBP11.59□□□□□ -0.55
SYN3-213ENST00000619146 XDHP47989 1333 aa11.59□□□□□ -0.55
SYN3-213ENST00000619146 PITPNM2Q9BZ72 1349 aa11.59□□□□□ -0.55
SYN3-213ENST00000619146 SZT2Q5T011 3432 aa11.58□□□□□ -0.55
SYN3-213ENST00000619146 WNT10BO00744 389 aa11.58□□□□□ -0.56
SYN3-213ENST00000619146 MYCP01106 439 aaPredicted RBP11.58□□□□□ -0.56
SYN3-213ENST00000619146 NF2P35240 595 aa11.58□□□□□ -0.56
SYN3-213ENST00000619146 AAMPQ13685 434 aa11.58□□□□□ -0.56
SYN3-213ENST00000619146 CCDC152Q4G0S7 254 aa11.58□□□□□ -0.56
SYN3-213ENST00000619146 ANKRD18AQ8IVF6 992 aa11.58□□□□□ -0.56
SYN3-213ENST00000619146 ZBTB38Q8NAP3 1195 aaPredicted RBP11.58□□□□□ -0.56
SYN3-213ENST00000619146 PANK1Q8TE04 598 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms