RNA–Protein interactions for RNA: ENST00000618778.4

GTDC1-220, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 5 BASIC

Gene GTDC1, Length 2,317 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-220ENST00000618778 NLRP3Q96P20 1036 aa6.66□□□□□ -1.34
GTDC1-220ENST00000618778 RWDD1Q9H446 243 aaPredicted RBP6.66□□□□□ -1.34
GTDC1-220ENST00000618778 CWC25Q9NXE8 425 aaPredicted RBP6.66□□□□□ -1.34
GTDC1-220ENST00000618778 KIF16BQ96L93 1317 aa6.66□□□□□ -1.34
GTDC1-220ENST00000618778 DDX58O95786 925 aaKnown RBP6.66□□□□□ -1.34
GTDC1-220ENST00000618778 PCCAP05165 728 aaPredicted RBP6.66□□□□□ -1.34
GTDC1-220ENST00000618778 LMNB1P20700 586 aa6.66□□□□□ -1.34
GTDC1-220ENST00000618778 CCDC93Q567U6 631 aa6.66□□□□□ -1.34
GTDC1-220ENST00000618778 EPHA10Q5JZY3 1008 aa6.66□□□□□ -1.34
GTDC1-220ENST00000618778 BEND3Q5T5X7 828 aa6.66□□□□□ -1.34
GTDC1-220ENST00000618778 ITPRIPQ8IWB1 547 aa6.66□□□□□ -1.34
GTDC1-220ENST00000618778 CCDC191Q8NCU4 936 aa6.66□□□□□ -1.34
GTDC1-220ENST00000618778 DDX19BQ9UMR2 479 aa6.66□□□□□ -1.34
GTDC1-220ENST00000618778 PDZRN3Q9UPQ7 1066 aa6.66□□□□□ -1.34
GTDC1-220ENST00000618778 ADAMTSL1Q8N6G6 1762 aa6.65□□□□□ -1.34
GTDC1-220ENST00000618778 IPO8O15397 1037 aaKnown RBP6.65□□□□□ -1.34
GTDC1-220ENST00000618778 TRIM28Q13263 835 aaKnown RBP6.65□□□□□ -1.34
GTDC1-220ENST00000618778 GRAPQ13588 217 aa6.65□□□□□ -1.34
GTDC1-220ENST00000618778 GCKRQ14397 625 aa6.65□□□□□ -1.34
GTDC1-220ENST00000618778 SLC4A10Q6U841 1118 aa6.65□□□□□ -1.34
GTDC1-220ENST00000618778 GRAPLQ8TC17 118 aaPredicted RBP6.65□□□□□ -1.34
GTDC1-220ENST00000618778 RBM17Q96I25 401 aaKnown RBP6.65□□□□□ -1.34
GTDC1-220ENST00000618778 GREM2Q9H772 168 aa6.65□□□□□ -1.34
GTDC1-220ENST00000618778 GPBP1L1Q9HC44 474 aaPredicted RBP6.65□□□□□ -1.34
GTDC1-220ENST00000618778 DAXXQ9UER7 740 aaPredicted RBP6.65□□□□□ -1.34
GTDC1-220ENST00000618778 LTBP3Q9NS15 1303 aa6.65□□□□□ -1.35
GTDC1-220ENST00000618778 POTECB2RU33 542 aa6.65□□□□□ -1.35
GTDC1-220ENST00000618778 CTSWP56202 376 aa6.65□□□□□ -1.35
GTDC1-220ENST00000618778 FKBP4Q02790 459 aaKnown RBP eCLIP6.65□□□□□ -1.35
GTDC1-220ENST00000618778 AOC3Q16853 763 aa6.65□□□□□ -1.35
GTDC1-220ENST00000618778 CRAMP1Q96RY5 1269 aa6.65□□□□□ -1.35
GTDC1-220ENST00000618778 ZBTB40Q9NUA8 1239 aa6.65□□□□□ -1.35
GTDC1-220ENST00000618778 CDHR2Q9BYE9 1310 aa6.64□□□□□ -1.35
GTDC1-220ENST00000618778 SCN4AP35499 1836 aa6.64□□□□□ -1.35
GTDC1-220ENST00000618778 DDNO94850 711 aaPredicted RBP6.64□□□□□ -1.35
GTDC1-220ENST00000618778 HDAC1Q13547 482 aaPredicted RBP6.64□□□□□ -1.35
GTDC1-220ENST00000618778 SF3B3Q15393 1217 aaKnown RBP6.64□□□□□ -1.35
GTDC1-220ENST00000618778 MARVELD3Q96A59 401 aa6.64□□□□□ -1.35
GTDC1-220ENST00000618778 DDRGK1Q96HY6 314 aa6.64□□□□□ -1.35
GTDC1-220ENST00000618778 ATP6V0A2Q9Y487 856 aa6.64□□□□□ -1.35
GTDC1-220ENST00000618778 H7C1W4 665 aa6.64□□□□□ -1.35
GTDC1-220ENST00000618778 PDE8AO60658 829 aa6.64□□□□□ -1.35
GTDC1-220ENST00000618778 PPP1R37O75864 691 aa6.64□□□□□ -1.35
GTDC1-220ENST00000618778 NBPF7P0C2Y1 421 aaPredicted RBP6.64□□□□□ -1.35
GTDC1-220ENST00000618778 ALDH1B1P30837 517 aa6.64□□□□□ -1.35
GTDC1-220ENST00000618778 IARSP41252 1262 aaKnown RBP6.64□□□□□ -1.35
GTDC1-220ENST00000618778 GPSM2P81274 684 aa6.64□□□□□ -1.35
GTDC1-220ENST00000618778 DDX46Q7L014 1031 aaKnown RBP6.64□□□□□ -1.35
GTDC1-220ENST00000618778 TTLL11Q8NHH1 800 aa6.64□□□□□ -1.35
GTDC1-220ENST00000618778 ARHGAP45Q92619 1136 aa6.64□□□□□ -1.35
GTDC1-220ENST00000618778 KAZALD1Q96I82 304 aa6.64□□□□□ -1.35
GTDC1-220ENST00000618778 SHTN1A0MZ66 631 aa6.63□□□□□ -1.35
GTDC1-220ENST00000618778 SNAP23O00161 211 aa6.63□□□□□ -1.35
GTDC1-220ENST00000618778 NEXNQ0ZGT2 675 aa6.63□□□□□ -1.35
GTDC1-220ENST00000618778 LINS1Q8NG48 757 aa6.63□□□□□ -1.35
GTDC1-220ENST00000618778 SUCLG2Q96I99 432 aa6.63□□□□□ -1.35
GTDC1-220ENST00000618778 RRAGCQ9HB90 399 aa6.63□□□□□ -1.35
GTDC1-220ENST00000618778 POLLQ9UGP5 575 aa6.63□□□□□ -1.35
GTDC1-220ENST00000618778 POLR2AP24928 1970 aaKnown RBP6.63□□□□□ -1.35
GTDC1-220ENST00000618778 YDJCA8MPS7 323 aa6.62□□□□□ -1.35
GTDC1-220ENST00000618778 KLRK1P26718 216 aa6.62□□□□□ -1.35
GTDC1-220ENST00000618778 FOXO4P98177 505 aa6.62□□□□□ -1.35
GTDC1-220ENST00000618778 NBR1Q14596 966 aa6.62□□□□□ -1.35
GTDC1-220ENST00000618778 SMC5Q8IY18 1101 aa6.62□□□□□ -1.35
GTDC1-220ENST00000618778 ZNF594Q96JF6 807 aaPredicted RBP6.62□□□□□ -1.35
GTDC1-220ENST00000618778 PSMD1Q99460 953 aa6.62□□□□□ -1.35
GTDC1-220ENST00000618778 MYH13Q9UKX3 1938 aa6.62□□□□□ -1.35
GTDC1-220ENST00000618778 GLTPD2A6NH11 291 aa6.62□□□□□ -1.35
GTDC1-220ENST00000618778 ZBTB7BO15156 539 aaPredicted RBP6.62□□□□□ -1.35
GTDC1-220ENST00000618778 PPIP5K2O43314 1243 aa6.62□□□□□ -1.35
GTDC1-220ENST00000618778 DOK7Q18PE1 504 aa6.62□□□□□ -1.35
GTDC1-220ENST00000618778 KCNQ5Q9NR82 932 aa6.62□□□□□ -1.35
GTDC1-220ENST00000618778 GRM8O00222 908 aa6.61□□□□□ -1.35
GTDC1-220ENST00000618778 ITGA6P23229 1130 aa6.61□□□□□ -1.35
GTDC1-220ENST00000618778 C1QTNF8P60827 252 aa6.61□□□□□ -1.35
GTDC1-220ENST00000618778 HTRA3P83110 453 aa6.61□□□□□ -1.35
GTDC1-220ENST00000618778 CCDC152Q4G0S7 254 aa6.61□□□□□ -1.35
GTDC1-220ENST00000618778 SOGA3Q5TF21 947 aa6.61□□□□□ -1.35
GTDC1-220ENST00000618778 DPP8Q6V1X1 898 aaPredicted RBP6.61□□□□□ -1.35
GTDC1-220ENST00000618778 CDAN1Q8IWY9 1227 aa6.61□□□□□ -1.35
GTDC1-220ENST00000618778 SP8Q8IXZ3 490 aa6.61□□□□□ -1.35
GTDC1-220ENST00000618778 RTKN2Q8IZC4 609 aa6.61□□□□□ -1.35
GTDC1-220ENST00000618778 KLHDC4Q8TBB5 520 aa6.61□□□□□ -1.35
GTDC1-220ENST00000618778 DBNDD1Q9H9R9 158 aa6.61□□□□□ -1.35
GTDC1-220ENST00000618778 ARAP2Q8WZ64 1704 aa6.61□□□□□ -1.35
GTDC1-220ENST00000618778 RTL9Q8NET4 1388 aa6.61□□□□□ -1.35
GTDC1-220ENST00000618778 FZD9O00144 591 aa6.61□□□□□ -1.35
GTDC1-220ENST00000618778 RIMBP2O15034 1052 aa6.61□□□□□ -1.35
GTDC1-220ENST00000618778 SLC4A3P48751 1232 aa6.61□□□□□ -1.35
GTDC1-220ENST00000618778 LARGE2Q8N3Y3 721 aa6.61□□□□□ -1.35
GTDC1-220ENST00000618778 MPNDQ8N594 471 aa6.61□□□□□ -1.35
GTDC1-220ENST00000618778 ANKRD44Q8N8A2 993 aa6.61□□□□□ -1.35
GTDC1-220ENST00000618778 PLA2G12BQ9BX93 195 aa6.61□□□□□ -1.35
GTDC1-220ENST00000618778 SRCIN1Q9C0H9 1055 aa6.61□□□□□ -1.35
GTDC1-220ENST00000618778 BICC1Q9H694 974 aaKnown RBP6.61□□□□□ -1.35
GTDC1-220ENST00000618778 NSFL1CQ9UNZ2 370 aaKnown RBP6.61□□□□□ -1.35
GTDC1-220ENST00000618778 CHMP3Q9Y3E7 222 aa6.61□□□□□ -1.35
GTDC1-220ENST00000618778 RPS8P62241 208 aaKnown RBP6.6□□□□□ -1.35
GTDC1-220ENST00000618778 LMBR1LQ6UX01 489 aa6.6□□□□□ -1.35
GTDC1-220ENST00000618778 TXNRD3Q86VQ6 643 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms