RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 ZNF157P51786 506 aaPredicted RBP18.81■□□□□ 0.6
UBXN1-218ENST00000616865 ZNF280AP59817 542 aaPredicted RBP18.81■□□□□ 0.6
UBXN1-218ENST00000616865 RSBN1LQ6PCB5 846 aaPredicted RBP18.81■□□□□ 0.6
UBXN1-218ENST00000616865 AGBL3Q8NEM8 1001 aa18.81■□□□□ 0.6
UBXN1-218ENST00000616865 CCDC85AQ96PX6 553 aaPredicted RBP18.81■□□□□ 0.6
UBXN1-218ENST00000616865 METTL22Q9BUU2 404 aaPredicted RBP18.81■□□□□ 0.6
UBXN1-218ENST00000616865 SLC10A3P09131 477 aa18.8■□□□□ 0.6
UBXN1-218ENST00000616865 KIF23Q02241 960 aaPredicted RBP18.8■□□□□ 0.6
UBXN1-218ENST00000616865 CDCA5Q96FF9 252 aa18.8■□□□□ 0.6
UBXN1-218ENST00000616865 DDX58O95786 925 aaKnown RBP18.79■□□□□ 0.6
UBXN1-218ENST00000616865 ANGEL2Q5VTE6 544 aaKnown RBP18.79■□□□□ 0.6
UBXN1-218ENST00000616865 ANKRD18AQ8IVF6 992 aa18.79■□□□□ 0.6
UBXN1-218ENST00000616865 MRPL50Q8N5N7 158 aaKnown RBP18.79■□□□□ 0.6
UBXN1-218ENST00000616865 JARID2Q92833 1246 aaPredicted RBP18.79■□□□□ 0.6
UBXN1-218ENST00000616865 MED23Q9ULK4 1368 aa18.78■□□□□ 0.6
UBXN1-218ENST00000616865 KIF16BQ96L93 1317 aa18.77■□□□□ 0.6
UBXN1-218ENST00000616865 CACNA1FO60840 1977 aa18.77■□□□□ 0.6
UBXN1-218ENST00000616865 BCAR3O75815 825 aa18.77■□□□□ 0.6
UBXN1-218ENST00000616865 ATP2B4P23634 1241 aa18.77■□□□□ 0.6
UBXN1-218ENST00000616865 CTSWP56202 376 aa18.77■□□□□ 0.6
UBXN1-218ENST00000616865 SCARF1Q14162 830 aa18.77■□□□□ 0.6
UBXN1-218ENST00000616865 PODNQ7Z5L7 613 aa18.77■□□□□ 0.6
UBXN1-218ENST00000616865 FRAT1Q92837 279 aaPredicted RBP18.77■□□□□ 0.6
UBXN1-218ENST00000616865 GMLQ99445 158 aa18.77■□□□□ 0.6
UBXN1-218ENST00000616865 MYOZ2Q9NPC6 264 aa18.77■□□□□ 0.6
UBXN1-218ENST00000616865 MAP3K2Q9Y2U5 619 aa18.77■□□□□ 0.6
UBXN1-218ENST00000616865 PITPNM2Q9BZ72 1349 aa18.76■□□□□ 0.59
UBXN1-218ENST00000616865 IPO8O15397 1037 aaKnown RBP18.76■□□□□ 0.59
UBXN1-218ENST00000616865 USP17L8P0C7I0 530 aa18.76■□□□□ 0.59
UBXN1-218ENST00000616865 FLIIQ13045 1269 aa18.76■□□□□ 0.59
UBXN1-218ENST00000616865 FKBP5Q13451 457 aaPredicted RBP18.76■□□□□ 0.59
UBXN1-218ENST00000616865 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.76■□□□□ 0.59
UBXN1-218ENST00000616865 CDC5LQ99459 802 aaKnown RBP18.76■□□□□ 0.59
UBXN1-218ENST00000616865 RNF186Q9NXI6 227 aa18.76■□□□□ 0.59
UBXN1-218ENST00000616865 USP17L3A6NCW0 530 aa18.75■□□□□ 0.59
UBXN1-218ENST00000616865 USP17L4A6NCW7 530 aa18.75■□□□□ 0.59
UBXN1-218ENST00000616865 TRPA1O75762 1119 aa18.75■□□□□ 0.59
UBXN1-218ENST00000616865 FKBP1BP68106 108 aa18.75■□□□□ 0.59
UBXN1-218ENST00000616865 G2E3Q7L622 706 aa18.75■□□□□ 0.59
UBXN1-218ENST00000616865 USP17L1Q7RTZ2 530 aa18.75■□□□□ 0.59
UBXN1-218ENST00000616865 RASAL3Q86YV0 1011 aa18.75■□□□□ 0.59
UBXN1-218ENST00000616865 IGKV5-2P06315 115 aa18.74■□□□□ 0.59
UBXN1-218ENST00000616865 KSR2Q6VAB6 950 aa18.74■□□□□ 0.59
UBXN1-218ENST00000616865 TTLL11Q8NHH1 800 aa18.74■□□□□ 0.59
UBXN1-218ENST00000616865 CSRNP1Q96S65 589 aa18.74■□□□□ 0.59
UBXN1-218ENST00000616865 NOB1Q9ULX3 412 aaKnown RBP18.74■□□□□ 0.59
UBXN1-218ENST00000616865 PTPRCP08575 1304 aa18.74■□□□□ 0.59
UBXN1-218ENST00000616865 PI4KAP2A4QPH2 592 aa18.73■□□□□ 0.59
UBXN1-218ENST00000616865 REM2Q8IYK8 340 aaPredicted RBP18.73■□□□□ 0.59
UBXN1-218ENST00000616865 PI4KAP1Q8N8J0 262 aa18.73■□□□□ 0.59
UBXN1-218ENST00000616865 GREM2Q9H772 168 aa18.73■□□□□ 0.59
UBXN1-218ENST00000616865 BSDC1Q9NW68 430 aaPredicted RBP18.73■□□□□ 0.59
UBXN1-218ENST00000616865 WTIPA6NIX2 430 aaPredicted RBP18.72■□□□□ 0.59
UBXN1-218ENST00000616865 TNRC18O15417 2968 aaPredicted RBP18.72■□□□□ 0.59
UBXN1-218ENST00000616865 NEXNQ0ZGT2 675 aa18.72■□□□□ 0.59
UBXN1-218ENST00000616865 API5Q9BZZ5 524 aaKnown RBP18.72■□□□□ 0.59
UBXN1-218ENST00000616865 MINPP1Q9UNW1 487 aa18.72■□□□□ 0.59
UBXN1-218ENST00000616865 CCT4P50991 539 aaKnown RBP18.71■□□□□ 0.59
UBXN1-218ENST00000616865 CWF19L2Q2TBE0 894 aaKnown RBP18.71■□□□□ 0.59
UBXN1-218ENST00000616865 DACT2Q5SW24 774 aa18.71■□□□□ 0.59
UBXN1-218ENST00000616865 ZKSCAN2Q63HK3 967 aa18.71■□□□□ 0.59
UBXN1-218ENST00000616865 MYO3BQ8WXR4 1341 aa18.71■□□□□ 0.59
UBXN1-218ENST00000616865 NEURL1BA8MQ27 555 aa18.7■□□□□ 0.58
UBXN1-218ENST00000616865 NBPF9Q3BBW0 867 aa18.7■□□□□ 0.58
UBXN1-218ENST00000616865 SCAF8Q9UPN6 1271 aaKnown RBP18.7■□□□□ 0.58
UBXN1-218ENST00000616865 A0A1B0GUL6 1792 aa18.7■□□□□ 0.58
UBXN1-218ENST00000616865 MOB2Q70IA6 237 aa18.69■□□□□ 0.58
UBXN1-218ENST00000616865 ARHGAP45Q92619 1136 aa18.69■□□□□ 0.58
UBXN1-218ENST00000616865 MXD3Q9BW11 206 aa18.69■□□□□ 0.58
UBXN1-218ENST00000616865 WNT10BO00744 389 aa18.68■□□□□ 0.58
UBXN1-218ENST00000616865 MS4A1P11836 297 aa18.68■□□□□ 0.58
UBXN1-218ENST00000616865 STRIP1Q5VSL9 837 aa18.68■□□□□ 0.58
UBXN1-218ENST00000616865 SLC4A10Q6U841 1118 aa18.68■□□□□ 0.58
UBXN1-218ENST00000616865 UBE3BQ7Z3V4 1068 aa18.68■□□□□ 0.58
UBXN1-218ENST00000616865 CTU1Q7Z7A3 348 aaKnown RBP18.68■□□□□ 0.58
UBXN1-218ENST00000616865 FTSJ3Q8IY81 847 aaKnown RBP18.68■□□□□ 0.58
UBXN1-218ENST00000616865 OGFOD1Q8N543 542 aa18.68■□□□□ 0.58
UBXN1-218ENST00000616865 COA1Q9GZY4 146 aa18.68■□□□□ 0.58
UBXN1-218ENST00000616865 H7C1W4 665 aa18.67■□□□□ 0.58
UBXN1-218ENST00000616865 IGHMBP2P38935 993 aaKnown RBP18.67■□□□□ 0.58
UBXN1-218ENST00000616865 PRAMEF18Q5VWM3 479 aa18.67■□□□□ 0.58
UBXN1-218ENST00000616865 ATF7IPQ6VMQ6 1270 aa18.67■□□□□ 0.58
UBXN1-218ENST00000616865 TXNRD3Q86VQ6 643 aa18.67■□□□□ 0.58
UBXN1-218ENST00000616865 DNAAF4Q8WXU2 420 aa18.67■□□□□ 0.58
UBXN1-218ENST00000616865 FBXW7Q969H0 707 aa18.67■□□□□ 0.58
UBXN1-218ENST00000616865 LEMD3Q9Y2U8 911 aa18.67■□□□□ 0.58
UBXN1-218ENST00000616865 SUPT16HQ9Y5B9 1047 aaKnown RBP18.67■□□□□ 0.58
UBXN1-218ENST00000616865 ECM29Q5VYK3 1845 aa18.66■□□□□ 0.58
UBXN1-218ENST00000616865 F6X3S4 739 aa18.66■□□□□ 0.58
UBXN1-218ENST00000616865 UBE2Q2LH0YL09 131 aa18.66■□□□□ 0.58
UBXN1-218ENST00000616865 PLIN1O60240 522 aa18.66■□□□□ 0.58
UBXN1-218ENST00000616865 SOX10P56693 466 aa18.66■□□□□ 0.58
UBXN1-218ENST00000616865 PLA2G12BQ9BX93 195 aa18.66■□□□□ 0.58
UBXN1-218ENST00000616865 SASH1O94885 1247 aa18.65■□□□□ 0.58
UBXN1-218ENST00000616865 MMP14P50281 582 aa18.65■□□□□ 0.58
UBXN1-218ENST00000616865 RRP1P56182 461 aaKnown RBP18.65■□□□□ 0.58
UBXN1-218ENST00000616865 TTLL12Q14166 644 aaPredicted RBP18.65■□□□□ 0.58
UBXN1-218ENST00000616865 CLUAP1Q96AJ1 413 aa18.65■□□□□ 0.58
UBXN1-218ENST00000616865 PCDH10Q9P2E7 1040 aa18.65■□□□□ 0.58
UBXN1-218ENST00000616865 ZNF804BA4D1E1 1349 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms