RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 EIF6P56537 245 aaKnown RBP14.13□□□□□ -0.15
SLIRP-212ENST00000613856 CHD1LQ86WJ1 897 aa14.13□□□□□ -0.15
SLIRP-212ENST00000613856 TTLL11Q8NHH1 800 aa14.13□□□□□ -0.15
SLIRP-212ENST00000613856 GLIS2Q9BZE0 524 aaPredicted RBP14.13□□□□□ -0.15
SLIRP-212ENST00000613856 EXOC6BQ9Y2D4 811 aa14.13□□□□□ -0.15
SLIRP-212ENST00000613856 SPEF2Q9C093 1822 aa14.13□□□□□ -0.15
SLIRP-212ENST00000613856 SHTN1A0MZ66 631 aa14.12□□□□□ -0.15
SLIRP-212ENST00000613856 SURF6O75683 361 aaKnown RBP14.12□□□□□ -0.15
SLIRP-212ENST00000613856 LMOD1P29536 600 aaPredicted RBP14.12□□□□□ -0.15
SLIRP-212ENST00000613856 ALDH1B1P30837 517 aa14.12□□□□□ -0.15
SLIRP-212ENST00000613856 PTPN12Q05209 780 aaKnown RBP14.12□□□□□ -0.15
SLIRP-212ENST00000613856 SAPCD2Q86UD0 394 aa14.12□□□□□ -0.15
SLIRP-212ENST00000613856 ERC1Q8IUD2 1116 aa14.12□□□□□ -0.15
SLIRP-212ENST00000613856 LARGE2Q8N3Y3 721 aa14.12□□□□□ -0.15
SLIRP-212ENST00000613856 BEGAINQ9BUH8 593 aa14.12□□□□□ -0.15
SLIRP-212ENST00000613856 FBXO3Q9UK99 471 aa14.12□□□□□ -0.15
SLIRP-212ENST00000613856 A0A1B0GUL6 1792 aa14.11□□□□□ -0.15
SLIRP-212ENST00000613856 CELF2O95319 508 aaKnown RBP14.11□□□□□ -0.15
SLIRP-212ENST00000613856 HCLS1P14317 486 aaPredicted RBP14.11□□□□□ -0.15
SLIRP-212ENST00000613856 SF3B3Q15393 1217 aaKnown RBP14.11□□□□□ -0.15
SLIRP-212ENST00000613856 AOC3Q16853 763 aa14.11□□□□□ -0.15
SLIRP-212ENST00000613856 ANKRD45Q5TZF3 282 aa14.11□□□□□ -0.15
SLIRP-212ENST00000613856 CIAPIN1Q6FI81 312 aa14.11□□□□□ -0.15
SLIRP-212ENST00000613856 KIF1BPQ96EK5 621 aa14.11□□□□□ -0.15
SLIRP-212ENST00000613856 LRRCC1Q9C099 1032 aa14.11□□□□□ -0.15
SLIRP-212ENST00000613856 PA2G4Q9UQ80 394 aaKnown RBP14.11□□□□□ -0.15
SLIRP-212ENST00000613856 CHMP3Q9Y3E7 222 aa14.11□□□□□ -0.15
SLIRP-212ENST00000613856 PDE4DIPQ5VU43 2346 aa14.1□□□□□ -0.15
SLIRP-212ENST00000613856 CIAO1O76071 339 aa14.1□□□□□ -0.15
SLIRP-212ENST00000613856 GTF2E1P29083 439 aaPredicted RBP14.1□□□□□ -0.15
SLIRP-212ENST00000613856 HIRAP54198 1017 aaPredicted RBP14.1□□□□□ -0.15
SLIRP-212ENST00000613856 IFIT5Q13325 482 aaKnown RBP14.1□□□□□ -0.15
SLIRP-212ENST00000613856 DGKZQ13574 1117 aa14.1□□□□□ -0.15
SLIRP-212ENST00000613856 CCDC57Q2TAC2 916 aa14.1□□□□□ -0.15
SLIRP-212ENST00000613856 CCDC152Q4G0S7 254 aa14.1□□□□□ -0.15
SLIRP-212ENST00000613856 USP50Q70EL3 339 aaPredicted RBP14.1□□□□□ -0.15
SLIRP-212ENST00000613856 GREM2Q9H772 168 aa14.1□□□□□ -0.15
SLIRP-212ENST00000613856 ZNF408Q9H9D4 720 aa14.1□□□□□ -0.15
SLIRP-212ENST00000613856 GPRC5DQ9NZD1 345 aa14.1□□□□□ -0.15
SLIRP-212ENST00000613856 ZBTB47Q9UFB7 747 aaPredicted RBP14.1□□□□□ -0.15
SLIRP-212ENST00000613856 POLR2AP24928 1970 aaKnown RBP14.1□□□□□ -0.15
SLIRP-212ENST00000613856 ANKRD18BA2A2Z9 1011 aa14.09□□□□□ -0.15
SLIRP-212ENST00000613856 PDE4AP27815 886 aa14.09□□□□□ -0.15
SLIRP-212ENST00000613856 G3BP1Q13283 466 aaKnown RBP eCLIP14.09□□□□□ -0.15
SLIRP-212ENST00000613856 RHPN1Q8TCX5 695 aa14.09□□□□□ -0.15
SLIRP-212ENST00000613856 TRPM4Q8TD43 1214 aa14.09□□□□□ -0.15
SLIRP-212ENST00000613856 LNPKQ9C0E8 428 aa14.09□□□□□ -0.15
SLIRP-212ENST00000613856 ARAP2Q8WZ64 1704 aa14.08□□□□□ -0.16
SLIRP-212ENST00000613856 PPEF1O14829 653 aaPredicted RBP14.08□□□□□ -0.16
SLIRP-212ENST00000613856 PPIP5K2O43314 1243 aa14.08□□□□□ -0.16
SLIRP-212ENST00000613856 ITGA6P23229 1130 aa14.08□□□□□ -0.16
SLIRP-212ENST00000613856 MAP2K2P36507 400 aa14.08□□□□□ -0.16
SLIRP-212ENST00000613856 GMPSP49915 693 aaPredicted RBP14.08□□□□□ -0.16
SLIRP-212ENST00000613856 CXCL9Q07325 125 aa14.08□□□□□ -0.16
SLIRP-212ENST00000613856 OS9Q13438 667 aaPredicted RBP14.08□□□□□ -0.16
SLIRP-212ENST00000613856 POTEDQ86YR6 584 aa14.08□□□□□ -0.16
SLIRP-212ENST00000613856 NIM1KQ8IY84 436 aa14.08□□□□□ -0.16
SLIRP-212ENST00000613856 KLHDC4Q8TBB5 520 aa14.08□□□□□ -0.16
SLIRP-212ENST00000613856 RPGRQ92834 1020 aaKnown RBP14.08□□□□□ -0.16
SLIRP-212ENST00000613856 EYA2O00167 538 aa14.07□□□□□ -0.16
SLIRP-212ENST00000613856 HOXA10P31260 410 aaPredicted RBP14.07□□□□□ -0.16
SLIRP-212ENST00000613856 IL15P40933 162 aaPredicted RBP14.07□□□□□ -0.16
SLIRP-212ENST00000613856 SOX10P56693 466 aa14.07□□□□□ -0.16
SLIRP-212ENST00000613856 SKAP1Q86WV1 359 aa14.07□□□□□ -0.16
SLIRP-212ENST00000613856 NLRP3Q96P20 1036 aa14.07□□□□□ -0.16
SLIRP-212ENST00000613856 ADARB2Q9NS39 739 aaKnown RBP14.07□□□□□ -0.16
SLIRP-212ENST00000613856 PCDH10Q9P2E7 1040 aa14.07□□□□□ -0.16
SLIRP-212ENST00000613856 SALL3Q9BXA9 1300 aa14.07□□□□□ -0.16
SLIRP-212ENST00000613856 COL4A1P02462 1669 aa14.07□□□□□ -0.16
SLIRP-212ENST00000613856 DUOX1Q9NRD9 1551 aa14.06□□□□□ -0.16
SLIRP-212ENST00000613856 APBB1O00213 710 aa14.06□□□□□ -0.16
SLIRP-212ENST00000613856 SMARCA5O60264 1052 aaPredicted RBP14.06□□□□□ -0.16
SLIRP-212ENST00000613856 SASH1O94885 1247 aa14.06□□□□□ -0.16
SLIRP-212ENST00000613856 TAF7LQ5H9L4 462 aa14.06□□□□□ -0.16
SLIRP-212ENST00000613856 ATG9AQ7Z3C6 839 aa14.06□□□□□ -0.16
SLIRP-212ENST00000613856 SIL1Q9H173 461 aa14.06□□□□□ -0.16
SLIRP-212ENST00000613856 RAD17O75943 681 aa14.05□□□□□ -0.16
SLIRP-212ENST00000613856 RGS3P49796 1198 aa14.05□□□□□ -0.16
SLIRP-212ENST00000613856 ZNF594Q96JF6 807 aaPredicted RBP14.05□□□□□ -0.16
SLIRP-212ENST00000613856 CCDC85AQ96PX6 553 aaPredicted RBP14.05□□□□□ -0.16
SLIRP-212ENST00000613856 CDC5LQ99459 802 aaKnown RBP14.05□□□□□ -0.16
SLIRP-212ENST00000613856 GPR108Q9NPR9 543 aa14.05□□□□□ -0.16
SLIRP-212ENST00000613856 ZNF609O15014 1411 aa14.05□□□□□ -0.16
SLIRP-212ENST00000613856 LRRC37AA6NMS7 1700 aa14.04□□□□□ -0.16
SLIRP-212ENST00000613856 EGFRP00533 1210 aa14.04□□□□□ -0.16
SLIRP-212ENST00000613856 CC2D2BQ6DHV5 1058 aa14.04□□□□□ -0.16
SLIRP-212ENST00000613856 CLASRPQ8N2M8 674 aaKnown RBP14.04□□□□□ -0.16
SLIRP-212ENST00000613856 CRAMP1Q96RY5 1269 aa14.04□□□□□ -0.16
SLIRP-212ENST00000613856 OSBPL3Q9H4L5 887 aa14.04□□□□□ -0.16
SLIRP-212ENST00000613856 IL1RAPL2Q9NP60 686 aa14.04□□□□□ -0.16
SLIRP-212ENST00000613856 AOX1Q06278 1338 aa14.04□□□□□ -0.16
SLIRP-212ENST00000613856 YDJCA8MPS7 323 aa14.03□□□□□ -0.16
SLIRP-212ENST00000613856 FAM155AB1AL88 458 aaPredicted RBP14.03□□□□□ -0.16
SLIRP-212ENST00000613856 IGHMBP2P38935 993 aaKnown RBP14.03□□□□□ -0.16
SLIRP-212ENST00000613856 LRRC24Q50LG9 513 aa14.03□□□□□ -0.16
SLIRP-212ENST00000613856 PLEKHM2Q8IWE5 1019 aa14.03□□□□□ -0.16
SLIRP-212ENST00000613856 RBM17Q96I25 401 aaKnown RBP14.03□□□□□ -0.16
SLIRP-212ENST00000613856 PUS3Q9BZE2 481 aaKnown RBP14.03□□□□□ -0.16
SLIRP-212ENST00000613856 SEC31BQ9NQW1 1179 aa14.03□□□□□ -0.16
SLIRP-212ENST00000613856 PGAP2Q9UHJ9 254 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms