RNA–Protein interactions for RNA: ENST00000612155.1

SRRM3-205, Transcript of serine/arginine repetitive matrix 3, humanhuman

TSL 1 (best)

Gene SRRM3, Length 2,150 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3-205ENST00000612155 RILPL2Q969X0 211 aa23.8■■□□□ 1.4
SRRM3-205ENST00000612155 EAF2Q96CJ1 260 aaPredicted RBP23.8■■□□□ 1.4
SRRM3-205ENST00000612155 ESYT1Q9BSJ8 1104 aa23.8■■□□□ 1.4
SRRM3-205ENST00000612155 PIM2Q9P1W9 311 aa23.8■■□□□ 1.4
SRRM3-205ENST00000612155 ANKIB1Q9P2G1 1089 aa23.8■■□□□ 1.4
SRRM3-205ENST00000612155 NSFL1CQ9UNZ2 370 aaKnown RBP23.8■■□□□ 1.4
SRRM3-205ENST00000612155 TRIM6-TRIM34B2RNG4 842 aa23.79■■□□□ 1.4
SRRM3-205ENST00000612155 EIF5BO60841 1220 aaKnown RBP23.79■■□□□ 1.4
SRRM3-205ENST00000612155 PDE8BO95263 885 aa23.79■■□□□ 1.4
SRRM3-205ENST00000612155 AACSQ86V21 672 aa23.79■■□□□ 1.4
SRRM3-205ENST00000612155 ERC1Q8IUD2 1116 aa23.79■■□□□ 1.4
SRRM3-205ENST00000612155 NEUROD6Q96NK8 337 aa23.79■■□□□ 1.4
SRRM3-205ENST00000612155 ATP6V0A2Q9Y487 856 aa23.79■■□□□ 1.4
SRRM3-205ENST00000612155 MROH5Q6ZUA9 1318 aa23.79■■□□□ 1.4
SRRM3-205ENST00000612155 MAP4K4O95819 1239 aaPredicted RBP23.78■■□□□ 1.4
SRRM3-205ENST00000612155 IL25Q9H293 177 aa23.78■■□□□ 1.4
SRRM3-205ENST00000612155 FBXO3Q9UK99 471 aa23.78■■□□□ 1.4
SRRM3-205ENST00000612155 BCS1LQ9Y276 419 aa23.78■■□□□ 1.4
SRRM3-205ENST00000612155 AK9Q5TCS8 1911 aa23.78■■□□□ 1.4
SRRM3-205ENST00000612155 REC8O95072 547 aa23.78■■□□□ 1.4
SRRM3-205ENST00000612155 KLRK1P26718 216 aa23.78■■□□□ 1.4
SRRM3-205ENST00000612155 TNNI3KQ59H18 835 aa23.78■■□□□ 1.4
SRRM3-205ENST00000612155 CHMP5Q9NZZ3 219 aa23.78■■□□□ 1.4
SRRM3-205ENST00000612155 FPGT-TNNI3KV9GXZ4 949 aa23.78■■□□□ 1.4
SRRM3-205ENST00000612155 ADORA1P30542 326 aa23.77■■□□□ 1.4
SRRM3-205ENST00000612155 A0A1B0GUL6 1792 aa23.77■■□□□ 1.4
SRRM3-205ENST00000612155 A0A1B0GUL7 405 aa23.76■■□□□ 1.39
SRRM3-205ENST00000612155 K7ELQ4 463 aaPredicted RBP23.76■■□□□ 1.39
SRRM3-205ENST00000612155 RABEP1Q15276 862 aa23.76■■□□□ 1.39
SRRM3-205ENST00000612155 SP8Q8IXZ3 490 aa23.76■■□□□ 1.39
SRRM3-205ENST00000612155 CLASRPQ8N2M8 674 aaKnown RBP23.76■■□□□ 1.39
SRRM3-205ENST00000612155 C7orf43Q8WVR3 580 aa23.76■■□□□ 1.39
SRRM3-205ENST00000612155 BRCA1P38398 1863 aaKnown RBP23.76■■□□□ 1.39
SRRM3-205ENST00000612155 ATP2B3Q16720 1220 aa23.75■■□□□ 1.39
SRRM3-205ENST00000612155 DALRD3Q5D0E6 543 aaKnown RBP23.75■■□□□ 1.39
SRRM3-205ENST00000612155 DBNDD2Q9BQY9 259 aa23.75■■□□□ 1.39
SRRM3-205ENST00000612155 POLLQ9UGP5 575 aa23.74■■□□□ 1.39
SRRM3-205ENST00000612155 TXNRD3Q86VQ6 643 aa23.74■■□□□ 1.39
SRRM3-205ENST00000612155 DBNLQ9UJU6 430 aaKnown RBP23.74■■□□□ 1.39
SRRM3-205ENST00000612155 ZNF609O15014 1411 aa23.73■■□□□ 1.39
SRRM3-205ENST00000612155 UFL1O94874 794 aa23.73■■□□□ 1.39
SRRM3-205ENST00000612155 KCNJ4P48050 445 aa23.73■■□□□ 1.39
SRRM3-205ENST00000612155 PUM3Q15397 648 aaKnown RBP23.73■■□□□ 1.39
SRRM3-205ENST00000612155 FOXD4L1Q9NU39 408 aa23.73■■□□□ 1.39
SRRM3-205ENST00000612155 LRRC37AA6NMS7 1700 aa23.73■■□□□ 1.39
SRRM3-205ENST00000612155 XDHP47989 1333 aa23.73■■□□□ 1.39
SRRM3-205ENST00000612155 IFIT2P09913 472 aaKnown RBP23.72■■□□□ 1.39
SRRM3-205ENST00000612155 C6orf229H3BNL8 230 aa23.72■■□□□ 1.39
SRRM3-205ENST00000612155 FGFR2P21802 821 aa23.72■■□□□ 1.39
SRRM3-205ENST00000612155 MPNDQ8N594 471 aa23.72■■□□□ 1.39
SRRM3-205ENST00000612155 ANKRD2Q9GZV1 360 aa23.72■■□□□ 1.39
SRRM3-205ENST00000612155 ZNF804BA4D1E1 1349 aa23.71■■□□□ 1.39
SRRM3-205ENST00000612155 DPP8Q6V1X1 898 aaPredicted RBP23.71■■□□□ 1.39
SRRM3-205ENST00000612155 XAGE2Q96GT9 111 aa23.71■■□□□ 1.39
SRRM3-205ENST00000612155 TBC1D16Q8TBP0 767 aa23.71■■□□□ 1.39
SRRM3-205ENST00000612155 PALD1Q9ULE6 856 aa23.71■■□□□ 1.39
SRRM3-205ENST00000612155 RIMBP2O15034 1052 aa23.7■■□□□ 1.38
SRRM3-205ENST00000612155 GYG1P46976 350 aa23.7■■□□□ 1.38
SRRM3-205ENST00000612155 TMC4Q7Z404 712 aa23.7■■□□□ 1.38
SRRM3-205ENST00000612155 TMX4Q9H1E5 349 aaPredicted RBP23.7■■□□□ 1.38
SRRM3-205ENST00000612155 GGA1Q9UJY5 639 aa23.7■■□□□ 1.38
SRRM3-205ENST00000612155 AKAP2Q9Y2D5 859 aa23.7■■□□□ 1.38
SRRM3-205ENST00000612155 LPIN2Q92539 896 aa23.69■■□□□ 1.38
SRRM3-205ENST00000612155 IQSEC3Q9UPP2 1182 aaPredicted RBP23.69■■□□□ 1.38
SRRM3-205ENST00000612155 TTC41PQ6P2S7 1318 aa23.69■■□□□ 1.38
SRRM3-205ENST00000612155 DUOX1Q9NRD9 1551 aa23.69■■□□□ 1.38
SRRM3-205ENST00000612155 BCAMP50895 628 aa23.69■■□□□ 1.38
SRRM3-205ENST00000612155 NDUFB9Q9Y6M9 179 aa23.69■■□□□ 1.38
SRRM3-205ENST00000612155 GPR108Q9NPR9 543 aa23.68■■□□□ 1.38
SRRM3-205ENST00000612155 LTBP1Q14766 1721 aa23.68■■□□□ 1.38
SRRM3-205ENST00000612155 SLC5A1P13866 664 aa23.68■■□□□ 1.38
SRRM3-205ENST00000612155 PODXL2Q9NZ53 605 aa23.68■■□□□ 1.38
SRRM3-205ENST00000612155 UBE4AQ14139 1066 aa23.67■■□□□ 1.38
SRRM3-205ENST00000612155 GORABQ5T7V8 394 aa23.67■■□□□ 1.38
SRRM3-205ENST00000612155 ANO2Q9NQ90 1003 aa23.67■■□□□ 1.38
SRRM3-205ENST00000612155 IFIT1P09914 478 aaKnown RBP23.67■■□□□ 1.38
SRRM3-205ENST00000612155 PHKA1P46020 1223 aa23.67■■□□□ 1.38
SRRM3-205ENST00000612155 GSE1Q14687 1217 aa23.67■■□□□ 1.38
SRRM3-205ENST00000612155 CCDC93Q567U6 631 aa23.67■■□□□ 1.38
SRRM3-205ENST00000612155 SNED1Q8TER0 1413 aa23.66■■□□□ 1.38
SRRM3-205ENST00000612155 GLRX3O76003 335 aaKnown RBP23.66■■□□□ 1.38
SRRM3-205ENST00000612155 MCM4P33991 863 aa23.66■■□□□ 1.38
SRRM3-205ENST00000612155 ECHDC1Q9NTX5 307 aa23.66■■□□□ 1.38
SRRM3-205ENST00000612155 LEMD3Q9Y2U8 911 aa23.66■■□□□ 1.38
SRRM3-205ENST00000612155 YBX3P16989 372 aaKnown RBP eCLIP23.65■■□□□ 1.38
SRRM3-205ENST00000612155 ATP2B4P23634 1241 aa23.65■■□□□ 1.38
SRRM3-205ENST00000612155 FAM84BQ96KN1 310 aaPredicted RBP23.65■■□□□ 1.38
SRRM3-205ENST00000612155 CIZ1Q9ULV3 898 aaPredicted RBP23.65■■□□□ 1.38
SRRM3-205ENST00000612155 SGSM2O43147 1006 aa23.64■■□□□ 1.38
SRRM3-205ENST00000612155 CCDC102BQ68D86 513 aa23.64■■□□□ 1.38
SRRM3-205ENST00000612155 PI16Q6UXB8 463 aa23.64■■□□□ 1.38
SRRM3-205ENST00000612155 CNTROBQ8N137 903 aa23.64■■□□□ 1.38
SRRM3-205ENST00000612155 ZNF277Q9NRM2 450 aaPredicted RBP23.64■■□□□ 1.38
SRRM3-205ENST00000612155 IRS2Q9Y4H2 1338 aa23.64■■□□□ 1.38
SRRM3-205ENST00000612155 RASSF7Q02833 373 aa23.64■■□□□ 1.37
SRRM3-205ENST00000612155 SCARF1Q14162 830 aa23.64■■□□□ 1.37
SRRM3-205ENST00000612155 DOK7Q18PE1 504 aa23.63■■□□□ 1.37
SRRM3-205ENST00000612155 SNRKQ9NRH2 765 aa23.63■■□□□ 1.37
SRRM3-205ENST00000612155 JAG2Q9Y219 1238 aa23.63■■□□□ 1.37
SRRM3-205ENST00000612155 RAB3GAP1Q15042 981 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms