RNA–Protein interactions for RNA: ENST00000607187.1

CTSA-215, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 509 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-215ENST00000607187 YDJCA8MPS7 323 aa12.6□□□□□ -0.39
CTSA-215ENST00000607187 RIMBP2O15034 1052 aa12.6□□□□□ -0.39
CTSA-215ENST00000607187 UFL1O94874 794 aa12.6□□□□□ -0.39
CTSA-215ENST00000607187 NBPF7P0C2Y1 421 aaPredicted RBP12.6□□□□□ -0.39
CTSA-215ENST00000607187 IGHMBP2P38935 993 aaKnown RBP12.6□□□□□ -0.39
CTSA-215ENST00000607187 SCNN1DP51172 638 aa12.6□□□□□ -0.39
CTSA-215ENST00000607187 RARSP54136 660 aaKnown RBP12.6□□□□□ -0.39
CTSA-215ENST00000607187 EPHA10Q5JZY3 1008 aa12.6□□□□□ -0.39
CTSA-215ENST00000607187 ANKRD18BA2A2Z9 1011 aa12.59□□□□□ -0.39
CTSA-215ENST00000607187 POTEIP0CG38 1075 aa12.59□□□□□ -0.39
CTSA-215ENST00000607187 POTEJP0CG39 1038 aa12.59□□□□□ -0.39
CTSA-215ENST00000607187 ATP2B4P23634 1241 aa12.59□□□□□ -0.39
CTSA-215ENST00000607187 EPHX2P34913 555 aa12.59□□□□□ -0.39
CTSA-215ENST00000607187 CIAPIN1Q6FI81 312 aa12.59□□□□□ -0.39
CTSA-215ENST00000607187 LMBR1LQ6UX01 489 aa12.59□□□□□ -0.39
CTSA-215ENST00000607187 KAZALD1Q96I82 304 aa12.59□□□□□ -0.39
CTSA-215ENST00000607187 GPR101Q96P66 508 aaPredicted RBP12.59□□□□□ -0.39
CTSA-215ENST00000607187 ZC3H12CQ9C0D7 883 aaKnown RBP12.59□□□□□ -0.39
CTSA-215ENST00000607187 DBNDD1Q9H9R9 158 aa12.59□□□□□ -0.39
CTSA-215ENST00000607187 NOB1Q9ULX3 412 aaKnown RBP12.59□□□□□ -0.39
CTSA-215ENST00000607187 RAD17O75943 681 aa12.58□□□□□ -0.4
CTSA-215ENST00000607187 LMOD1P29536 600 aaPredicted RBP12.58□□□□□ -0.4
CTSA-215ENST00000607187 APLP1P51693 650 aa12.58□□□□□ -0.4
CTSA-215ENST00000607187 IFIT5Q13325 482 aaKnown RBP12.58□□□□□ -0.4
CTSA-215ENST00000607187 TNIP1Q15025 636 aa12.58□□□□□ -0.4
CTSA-215ENST00000607187 DOK7Q18PE1 504 aa12.58□□□□□ -0.4
CTSA-215ENST00000607187 LDHDQ86WU2 507 aa12.58□□□□□ -0.4
CTSA-215ENST00000607187 SUCLG2Q96I99 432 aa12.58□□□□□ -0.4
CTSA-215ENST00000607187 MPHOSPH8Q99549 860 aa12.58□□□□□ -0.4
CTSA-215ENST00000607187 USP44Q9H0E7 712 aa12.58□□□□□ -0.4
CTSA-215ENST00000607187 CHMP3Q9Y3E7 222 aa12.58□□□□□ -0.4
CTSA-215ENST00000607187 ZBED9Q6R2W3 1325 aa12.58□□□□□ -0.4
CTSA-215ENST00000607187 WTIPA6NIX2 430 aaPredicted RBP12.57□□□□□ -0.4
CTSA-215ENST00000607187 PITPNM1O00562 1244 aa12.57□□□□□ -0.4
CTSA-215ENST00000607187 ECE2O60344 883 aa12.57□□□□□ -0.4
CTSA-215ENST00000607187 EPS15P42566 896 aa12.57□□□□□ -0.4
CTSA-215ENST00000607187 CCT4P50991 539 aaKnown RBP12.57□□□□□ -0.4
CTSA-215ENST00000607187 CHADLQ6NUI6 762 aa12.57□□□□□ -0.4
CTSA-215ENST00000607187 PNMA8AQ86V59 439 aaPredicted RBP12.57□□□□□ -0.4
CTSA-215ENST00000607187 ARHGAP45Q92619 1136 aa12.57□□□□□ -0.4
CTSA-215ENST00000607187 API5Q9BZZ5 524 aaKnown RBP12.57□□□□□ -0.4
CTSA-215ENST00000607187 GPRC5DQ9NZD1 345 aa12.57□□□□□ -0.4
CTSA-215ENST00000607187 ZMYND10O75800 440 aa12.56□□□□□ -0.4
CTSA-215ENST00000607187 GMPSP49915 693 aaPredicted RBP12.56□□□□□ -0.4
CTSA-215ENST00000607187 CHRNDQ07001 517 aa12.56□□□□□ -0.4
CTSA-215ENST00000607187 CCDC57Q2TAC2 916 aa12.56□□□□□ -0.4
CTSA-215ENST00000607187 RABL6Q3YEC7 729 aaPredicted RBP12.56□□□□□ -0.4
CTSA-215ENST00000607187 EAPPQ56P03 285 aaPredicted RBP12.56□□□□□ -0.4
CTSA-215ENST00000607187 ANKRD2Q9GZV1 360 aa12.56□□□□□ -0.4
CTSA-215ENST00000607187 KCNQ5Q9NR82 932 aa12.56□□□□□ -0.4
CTSA-215ENST00000607187 LEMD3Q9Y2U8 911 aa12.56□□□□□ -0.4
CTSA-215ENST00000607187 KIF16BQ96L93 1317 aa12.56□□□□□ -0.4
CTSA-215ENST00000607187 POLR2AP24928 1970 aaKnown RBP12.56□□□□□ -0.4
CTSA-215ENST00000607187 MED23Q9ULK4 1368 aa12.56□□□□□ -0.4
CTSA-215ENST00000607187 ZNF646O15015 1829 aaPredicted RBP12.55□□□□□ -0.4
CTSA-215ENST00000607187 PSMD14O00487 310 aa12.55□□□□□ -0.4
CTSA-215ENST00000607187 ANKRD44Q8N8A2 993 aa12.55□□□□□ -0.4
CTSA-215ENST00000607187 ZNF579Q8NAF0 562 aaKnown RBP12.55□□□□□ -0.4
CTSA-215ENST00000607187 FBXO22Q8NEZ5 403 aa12.55□□□□□ -0.4
CTSA-215ENST00000607187 BICC1Q9H694 974 aaKnown RBP12.55□□□□□ -0.4
CTSA-215ENST00000607187 G3V3G9 751 aa12.54□□□□□ -0.4
CTSA-215ENST00000607187 BCAR3O75815 825 aa12.54□□□□□ -0.4
CTSA-215ENST00000607187 TAF7LQ5H9L4 462 aa12.54□□□□□ -0.4
CTSA-215ENST00000607187 LDHAL6AQ6ZMR3 332 aa12.54□□□□□ -0.4
CTSA-215ENST00000607187 USP50Q70EL3 339 aaPredicted RBP12.54□□□□□ -0.4
CTSA-215ENST00000607187 PODNQ7Z5L7 613 aa12.54□□□□□ -0.4
CTSA-215ENST00000607187 DPF2Q92785 391 aa12.54□□□□□ -0.4
CTSA-215ENST00000607187 ZNF594Q96JF6 807 aaPredicted RBP12.54□□□□□ -0.4
CTSA-215ENST00000607187 ADARB2Q9NS39 739 aaKnown RBP12.54□□□□□ -0.4
CTSA-215ENST00000607187 ZNF804BA4D1E1 1349 aa12.54□□□□□ -0.4
CTSA-215ENST00000607187 ITGBL1O95965 494 aaPredicted RBP12.53□□□□□ -0.4
CTSA-215ENST00000607187 VIL1P09327 827 aaKnown RBP12.53□□□□□ -0.4
CTSA-215ENST00000607187 RPS12P25398 132 aaKnown RBP12.53□□□□□ -0.4
CTSA-215ENST00000607187 TXNRD3Q86VQ6 643 aa12.53□□□□□ -0.4
CTSA-215ENST00000607187 DNAJC5GQ8N7S2 189 aa12.53□□□□□ -0.4
CTSA-215ENST00000607187 CNOT7Q9UIV1 285 aaKnown RBP12.53□□□□□ -0.4
CTSA-215ENST00000607187 PASKQ96RG2 1323 aa12.53□□□□□ -0.4
CTSA-215ENST00000607187 ZNF609O15014 1411 aa12.53□□□□□ -0.4
CTSA-215ENST00000607187 TRPM7Q96QT4 1865 aa12.53□□□□□ -0.4
CTSA-215ENST00000607187 SHTN1A0MZ66 631 aa12.52□□□□□ -0.41
CTSA-215ENST00000607187 H7C1D1 291 aa12.52□□□□□ -0.41
CTSA-215ENST00000607187 IPO8O15397 1037 aaKnown RBP12.52□□□□□ -0.41
CTSA-215ENST00000607187 TAF5LO75529 589 aa12.52□□□□□ -0.41
CTSA-215ENST00000607187 TRIM27P14373 513 aa12.52□□□□□ -0.41
CTSA-215ENST00000607187 INTS3Q68E01 1043 aaKnown RBP12.52□□□□□ -0.41
CTSA-215ENST00000607187 SMYD5Q6GMV2 418 aa12.52□□□□□ -0.41
CTSA-215ENST00000607187 ATF7IPQ6VMQ6 1270 aa12.52□□□□□ -0.41
CTSA-215ENST00000607187 CNTROBQ8N137 903 aa12.52□□□□□ -0.41
CTSA-215ENST00000607187 HELBQ8NG08 1087 aaPredicted RBP12.52□□□□□ -0.41
CTSA-215ENST00000607187 CNNM1Q9NRU3 951 aa12.52□□□□□ -0.41
CTSA-215ENST00000607187 IRS2Q9Y4H2 1338 aa12.52□□□□□ -0.41
CTSA-215ENST00000607187 USP17L3A6NCW0 530 aa12.51□□□□□ -0.41
CTSA-215ENST00000607187 USP17L4A6NCW7 530 aa12.51□□□□□ -0.41
CTSA-215ENST00000607187 SNAP23O00161 211 aa12.51□□□□□ -0.41
CTSA-215ENST00000607187 KLRK1P26718 216 aa12.51□□□□□ -0.41
CTSA-215ENST00000607187 KCNJ4P48050 445 aa12.51□□□□□ -0.41
CTSA-215ENST00000607187 HTRA3P83110 453 aa12.51□□□□□ -0.41
CTSA-215ENST00000607187 MAP1SQ66K74 1059 aaPredicted RBP12.51□□□□□ -0.41
CTSA-215ENST00000607187 C15orf52Q6ZUT6 534 aaKnown RBP12.51□□□□□ -0.41
CTSA-215ENST00000607187 USP17L1Q7RTZ2 530 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms