RNA–Protein interactions for RNA: ENST00000600456.1

SNRPA-208, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-208ENST00000600456 IQCA1LA6NCM1 817 aa17.15■□□□□ 0.34
SNRPA-208ENST00000600456 VEGFAP15692 232 aaPredicted RBP17.15■□□□□ 0.34
SNRPA-208ENST00000600456 PUM3Q15397 648 aaKnown RBP17.15■□□□□ 0.34
SNRPA-208ENST00000600456 TXNRD3Q86VQ6 643 aa17.15■□□□□ 0.34
SNRPA-208ENST00000600456 RPAP2Q8IXW5 612 aaPredicted RBP17.15■□□□□ 0.34
SNRPA-208ENST00000600456 NMRK2Q9NPI5 230 aa17.15■□□□□ 0.34
SNRPA-208ENST00000600456 CEP126Q9P2H0 1117 aa17.15■□□□□ 0.34
SNRPA-208ENST00000600456 SNAP23O00161 211 aa17.14■□□□□ 0.33
SNRPA-208ENST00000600456 RAD17O75943 681 aa17.14■□□□□ 0.33
SNRPA-208ENST00000600456 KLRK1P26718 216 aa17.14■□□□□ 0.33
SNRPA-208ENST00000600456 ZNF804AQ7Z570 1209 aa17.14■□□□□ 0.33
SNRPA-208ENST00000600456 GJA3Q9Y6H8 435 aa17.14■□□□□ 0.33
SNRPA-208ENST00000600456 RRAGCQ9HB90 399 aa17.13■□□□□ 0.33
SNRPA-208ENST00000600456 KIF3CO14782 793 aa17.12■□□□□ 0.33
SNRPA-208ENST00000600456 HMMRO75330 724 aa17.12■□□□□ 0.33
SNRPA-208ENST00000600456 IFIT1P09914 478 aaKnown RBP17.12■□□□□ 0.33
SNRPA-208ENST00000600456 FGFR2P21802 821 aa17.12■□□□□ 0.33
SNRPA-208ENST00000600456 G3BP1Q13283 466 aaKnown RBP eCLIP17.12■□□□□ 0.33
SNRPA-208ENST00000600456 LPIN2Q92539 896 aa17.12■□□□□ 0.33
SNRPA-208ENST00000600456 USP17L3A6NCW0 530 aa17.11■□□□□ 0.33
SNRPA-208ENST00000600456 USP17L4A6NCW7 530 aa17.11■□□□□ 0.33
SNRPA-208ENST00000600456 POTECB2RU33 542 aa17.11■□□□□ 0.33
SNRPA-208ENST00000600456 PSMD14O00487 310 aa17.11■□□□□ 0.33
SNRPA-208ENST00000600456 VIL1P09327 827 aaKnown RBP17.11■□□□□ 0.33
SNRPA-208ENST00000600456 SLC5A1P13866 664 aa17.11■□□□□ 0.33
SNRPA-208ENST00000600456 IL1R1P14778 569 aa17.11■□□□□ 0.33
SNRPA-208ENST00000600456 RPS12P25398 132 aaKnown RBP17.11■□□□□ 0.33
SNRPA-208ENST00000600456 LMOD1P29536 600 aaPredicted RBP17.11■□□□□ 0.33
SNRPA-208ENST00000600456 ATP2B3Q16720 1220 aa17.11■□□□□ 0.33
SNRPA-208ENST00000600456 CAVIN4Q5BKX8 364 aa17.11■□□□□ 0.33
SNRPA-208ENST00000600456 USP17L1Q7RTZ2 530 aa17.11■□□□□ 0.33
SNRPA-208ENST00000600456 CD209Q9NNX6 404 aa17.11■□□□□ 0.33
SNRPA-208ENST00000600456 HACL1Q9UJ83 578 aa17.11■□□□□ 0.33
SNRPA-208ENST00000600456 NOP58Q9Y2X3 529 aaKnown RBP17.11■□□□□ 0.33
SNRPA-208ENST00000600456 ZNF609O15014 1411 aa17.11■□□□□ 0.33
SNRPA-208ENST00000600456 SURF6O75683 361 aaKnown RBP17.1■□□□□ 0.33
SNRPA-208ENST00000600456 HIBADHP31937 336 aaKnown RBP17.1■□□□□ 0.33
SNRPA-208ENST00000600456 GMPSP49915 693 aaPredicted RBP17.1■□□□□ 0.33
SNRPA-208ENST00000600456 SCNN1DP51172 638 aa17.1■□□□□ 0.33
SNRPA-208ENST00000600456 STRIP1Q5VSL9 837 aa17.1■□□□□ 0.33
SNRPA-208ENST00000600456 C16orf71Q8IYS4 520 aaPredicted RBP17.1■□□□□ 0.33
SNRPA-208ENST00000600456 DPF2Q92785 391 aa17.1■□□□□ 0.33
SNRPA-208ENST00000600456 KCNQ5Q9NR82 932 aa17.1■□□□□ 0.33
SNRPA-208ENST00000600456 AKAP2Q9Y2D5 859 aa17.1■□□□□ 0.33
SNRPA-208ENST00000600456 FBXO33Q7Z6M2 555 aa17.09■□□□□ 0.33
SNRPA-208ENST00000600456 FAM84BQ96KN1 310 aaPredicted RBP17.09■□□□□ 0.33
SNRPA-208ENST00000600456 TAF1DQ9H5J8 278 aaPredicted RBP17.09■□□□□ 0.33
SNRPA-208ENST00000600456 GPRC5DQ9NZD1 345 aa17.09■□□□□ 0.33
SNRPA-208ENST00000600456 SCN4AP35499 1836 aa17.09■□□□□ 0.33
SNRPA-208ENST00000600456 MYO3BQ8WXR4 1341 aa17.08■□□□□ 0.32
SNRPA-208ENST00000600456 TOMM70O94826 608 aa17.08■□□□□ 0.32
SNRPA-208ENST00000600456 GYG1P46976 350 aa17.08■□□□□ 0.32
SNRPA-208ENST00000600456 TFCP2Q12800 502 aa17.08■□□□□ 0.32
SNRPA-208ENST00000600456 OS9Q13438 667 aaPredicted RBP17.08■□□□□ 0.32
SNRPA-208ENST00000600456 AAMPQ13685 434 aa17.08■□□□□ 0.32
SNRPA-208ENST00000600456 HSP90AB4PQ58FF6 505 aa17.08■□□□□ 0.32
SNRPA-208ENST00000600456 DACT2Q5SW24 774 aa17.08■□□□□ 0.32
SNRPA-208ENST00000600456 RSBN1LQ6PCB5 846 aaPredicted RBP17.08■□□□□ 0.32
SNRPA-208ENST00000600456 PNMA8AQ86V59 439 aaPredicted RBP17.08■□□□□ 0.32
SNRPA-208ENST00000600456 VPS37DQ86XT2 251 aa17.08■□□□□ 0.32
SNRPA-208ENST00000600456 SIRT2Q8IXJ6 389 aa17.08■□□□□ 0.32
SNRPA-208ENST00000600456 AGBL3Q8NEM8 1001 aa17.08■□□□□ 0.32
SNRPA-208ENST00000600456 TDRD7Q8NHU6 1098 aaKnown RBP17.08■□□□□ 0.32
SNRPA-208ENST00000600456 SASH1O94885 1247 aa17.07■□□□□ 0.32
SNRPA-208ENST00000600456 EPHX2P34913 555 aa17.07■□□□□ 0.32
SNRPA-208ENST00000600456 TTLL5Q6EMB2 1281 aa17.07■□□□□ 0.32
SNRPA-208ENST00000600456 ERC1Q8IUD2 1116 aa17.07■□□□□ 0.32
SNRPA-208ENST00000600456 CRBNQ96SW2 442 aa17.07■□□□□ 0.32
SNRPA-208ENST00000600456 GPR108Q9NPR9 543 aa17.07■□□□□ 0.32
SNRPA-208ENST00000600456 SUPT16HQ9Y5B9 1047 aaKnown RBP17.07■□□□□ 0.32
SNRPA-208ENST00000600456 SCN9AQ15858 1988 aa17.07■□□□□ 0.32
SNRPA-208ENST00000600456 ZBTB22O15209 634 aa17.06■□□□□ 0.32
SNRPA-208ENST00000600456 MMP14P50281 582 aa17.06■□□□□ 0.32
SNRPA-208ENST00000600456 FKBP1AP62942 108 aaKnown RBP17.06■□□□□ 0.32
SNRPA-208ENST00000600456 GTF2IP78347 998 aa17.06■□□□□ 0.32
SNRPA-208ENST00000600456 RBM46Q8TBY0 533 aaKnown RBP17.06■□□□□ 0.32
SNRPA-208ENST00000600456 ADARB2Q9NS39 739 aaKnown RBP17.06■□□□□ 0.32
SNRPA-208ENST00000600456 ZBTB12Q9Y330 459 aaPredicted RBP17.06■□□□□ 0.32
SNRPA-208ENST00000600456 PSME4Q14997 1843 aa17.05■□□□□ 0.32
SNRPA-208ENST00000600456 FAM205AQ6ZU69 1335 aa17.05■□□□□ 0.32
SNRPA-208ENST00000600456 A0A1B0GUL7 405 aa17.05■□□□□ 0.32
SNRPA-208ENST00000600456 H7C1D1 291 aa17.05■□□□□ 0.32
SNRPA-208ENST00000600456 EPS15P42566 896 aa17.05■□□□□ 0.32
SNRPA-208ENST00000600456 USP50Q70EL3 339 aaPredicted RBP17.05■□□□□ 0.32
SNRPA-208ENST00000600456 FBXW7Q969H0 707 aa17.05■□□□□ 0.32
SNRPA-208ENST00000600456 GMLQ99445 158 aa17.05■□□□□ 0.32
SNRPA-208ENST00000600456 CNOT7Q9UIV1 285 aaKnown RBP17.05■□□□□ 0.32
SNRPA-208ENST00000600456 BCAMP50895 628 aa17.04■□□□□ 0.32
SNRPA-208ENST00000600456 MICALL2Q8IY33 904 aa17.04■□□□□ 0.32
SNRPA-208ENST00000600456 GNL3LQ9NVN8 582 aaKnown RBP17.04■□□□□ 0.32
SNRPA-208ENST00000600456 SEMA3EO15041 775 aa17.03■□□□□ 0.32
SNRPA-208ENST00000600456 USP17L8P0C7I0 530 aa17.03■□□□□ 0.32
SNRPA-208ENST00000600456 ZNF280AP59817 542 aaPredicted RBP17.03■□□□□ 0.32
SNRPA-208ENST00000600456 TIMM10P62072 90 aa17.03■□□□□ 0.32
SNRPA-208ENST00000600456 LDHDQ86WU2 507 aa17.03■□□□□ 0.32
SNRPA-208ENST00000600456 EXOC6BQ9Y2D4 811 aa17.03■□□□□ 0.32
SNRPA-208ENST00000600456 ARAP2Q8WZ64 1704 aa17.02■□□□□ 0.32
SNRPA-208ENST00000600456 RAB11FIP3O75154 756 aa17.02■□□□□ 0.32
SNRPA-208ENST00000600456 FRAT2O75474 233 aaPredicted RBP17.02■□□□□ 0.32
SNRPA-208ENST00000600456 FSTL1Q12841 308 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms