RNA–Protein interactions for RNA: ENST00000597180.1

IRF3-216, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 301 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-216ENST00000597180 PODNQ7Z5L7 613 aa22.56■■□□□ 1.2
IRF3-216ENST00000597180 COA1Q9GZY4 146 aa22.56■■□□□ 1.2
IRF3-216ENST00000597180 PNMA6EA0A0J9YXQ4 647 aa22.55■■□□□ 1.2
IRF3-216ENST00000597180 C1orf115Q9H7X2 142 aa22.55■■□□□ 1.2
IRF3-216ENST00000597180 PA2G4Q9UQ80 394 aaKnown RBP22.55■■□□□ 1.2
IRF3-216ENST00000597180 PDE8BO95263 885 aa22.54■■□□□ 1.2
IRF3-216ENST00000597180 SCNN1DP51172 638 aa22.54■■□□□ 1.2
IRF3-216ENST00000597180 ATP8B2P98198 1209 aa22.54■■□□□ 1.2
IRF3-216ENST00000597180 POLA2Q14181 598 aa22.54■■□□□ 1.2
IRF3-216ENST00000597180 SIL1Q9H173 461 aa22.54■■□□□ 1.2
IRF3-216ENST00000597180 KCNQ5Q9NR82 932 aa22.54■■□□□ 1.2
IRF3-216ENST00000597180 HACL1Q9UJ83 578 aa22.54■■□□□ 1.2
IRF3-216ENST00000597180 ZNF609O15014 1411 aa22.54■■□□□ 1.2
IRF3-216ENST00000597180 ADAMTSL1Q8N6G6 1762 aa22.53■■□□□ 1.2
IRF3-216ENST00000597180 PSMD14O00487 310 aa22.53■■□□□ 1.2
IRF3-216ENST00000597180 RRP1P56182 461 aaKnown RBP22.53■■□□□ 1.2
IRF3-216ENST00000597180 CHMP4BQ9H444 224 aaKnown RBP22.53■■□□□ 1.2
IRF3-216ENST00000597180 ARAP2Q8WZ64 1704 aa22.53■■□□□ 1.2
IRF3-216ENST00000597180 TOMM70O94826 608 aa22.52■■□□□ 1.2
IRF3-216ENST00000597180 IL15P40933 162 aaPredicted RBP22.52■■□□□ 1.2
IRF3-216ENST00000597180 SSH3Q8TE77 659 aa22.52■■□□□ 1.2
IRF3-216ENST00000597180 TAF1DQ9H5J8 278 aaPredicted RBP22.52■■□□□ 1.2
IRF3-216ENST00000597180 ZBTB40Q9NUA8 1239 aa22.52■■□□□ 1.2
IRF3-216ENST00000597180 VIL1P09327 827 aaKnown RBP22.51■■□□□ 1.19
IRF3-216ENST00000597180 GMPSP49915 693 aaPredicted RBP22.51■■□□□ 1.19
IRF3-216ENST00000597180 C16orf71Q8IYS4 520 aaPredicted RBP22.51■■□□□ 1.19
IRF3-216ENST00000597180 CD209Q9NNX6 404 aa22.51■■□□□ 1.19
IRF3-216ENST00000597180 GPRC5DQ9NZD1 345 aa22.51■■□□□ 1.19
IRF3-216ENST00000597180 MYH13Q9UKX3 1938 aa22.51■■□□□ 1.19
IRF3-216ENST00000597180 FGFR2P21802 821 aa22.5■■□□□ 1.19
IRF3-216ENST00000597180 LMOD1P29536 600 aaPredicted RBP22.5■■□□□ 1.19
IRF3-216ENST00000597180 EPHX2P34913 555 aa22.5■■□□□ 1.19
IRF3-216ENST00000597180 PUM3Q15397 648 aaKnown RBP22.5■■□□□ 1.19
IRF3-216ENST00000597180 CEP85Q6P2H3 762 aa22.5■■□□□ 1.19
IRF3-216ENST00000597180 ZNF804AQ7Z570 1209 aa22.5■■□□□ 1.19
IRF3-216ENST00000597180 RBM46Q8TBY0 533 aaKnown RBP22.5■■□□□ 1.19
IRF3-216ENST00000597180 USP17L3A6NCW0 530 aa22.49■■□□□ 1.19
IRF3-216ENST00000597180 USP17L4A6NCW7 530 aa22.49■■□□□ 1.19
IRF3-216ENST00000597180 IL1R1P14778 569 aa22.49■■□□□ 1.19
IRF3-216ENST00000597180 RPS12P25398 132 aaKnown RBP22.49■■□□□ 1.19
IRF3-216ENST00000597180 USP17L1Q7RTZ2 530 aa22.49■■□□□ 1.19
IRF3-216ENST00000597180 DPF2Q92785 391 aa22.49■■□□□ 1.19
IRF3-216ENST00000597180 CEP126Q9P2H0 1117 aa22.49■■□□□ 1.19
IRF3-216ENST00000597180 EPS15P42566 896 aa22.48■■□□□ 1.19
IRF3-216ENST00000597180 ZBTB12Q9Y330 459 aaPredicted RBP22.48■■□□□ 1.19
IRF3-216ENST00000597180 C1QTNF8P60827 252 aa22.47■■□□□ 1.19
IRF3-216ENST00000597180 STRIP1Q5VSL9 837 aa22.47■■□□□ 1.19
IRF3-216ENST00000597180 RSBN1LQ6PCB5 846 aaPredicted RBP22.47■■□□□ 1.19
IRF3-216ENST00000597180 LPIN2Q92539 896 aa22.47■■□□□ 1.19
IRF3-216ENST00000597180 FAM84BQ96KN1 310 aaPredicted RBP22.47■■□□□ 1.19
IRF3-216ENST00000597180 IFIT1P09914 478 aaKnown RBP22.46■■□□□ 1.19
IRF3-216ENST00000597180 HIBADHP31937 336 aaKnown RBP22.46■■□□□ 1.19
IRF3-216ENST00000597180 GYG1P46976 350 aa22.46■■□□□ 1.19
IRF3-216ENST00000597180 DACT2Q5SW24 774 aa22.46■■□□□ 1.19
IRF3-216ENST00000597180 FBXO33Q7Z6M2 555 aa22.46■■□□□ 1.19
IRF3-216ENST00000597180 PNMA8AQ86V59 439 aaPredicted RBP22.46■■□□□ 1.19
IRF3-216ENST00000597180 AGBL3Q8NEM8 1001 aa22.46■■□□□ 1.19
IRF3-216ENST00000597180 SLC5A1P13866 664 aa22.45■■□□□ 1.18
IRF3-216ENST00000597180 RPAP2Q8IXW5 612 aaPredicted RBP22.45■■□□□ 1.18
IRF3-216ENST00000597180 TDRD7Q8NHU6 1098 aaKnown RBP22.45■■□□□ 1.18
IRF3-216ENST00000597180 GMLQ99445 158 aa22.45■■□□□ 1.18
IRF3-216ENST00000597180 ADARB2Q9NS39 739 aaKnown RBP22.45■■□□□ 1.18
IRF3-216ENST00000597180 CNOT7Q9UIV1 285 aaKnown RBP22.45■■□□□ 1.18
IRF3-216ENST00000597180 NOP58Q9Y2X3 529 aaKnown RBP22.45■■□□□ 1.18
IRF3-216ENST00000597180 G3BP1Q13283 466 aaKnown RBP eCLIP22.44■■□□□ 1.18
IRF3-216ENST00000597180 ATP2B3Q16720 1220 aa22.44■■□□□ 1.18
IRF3-216ENST00000597180 TTLL5Q6EMB2 1281 aa22.44■■□□□ 1.18
IRF3-216ENST00000597180 USP50Q70EL3 339 aaPredicted RBP22.44■■□□□ 1.18
IRF3-216ENST00000597180 LDHDQ86WU2 507 aa22.44■■□□□ 1.18
IRF3-216ENST00000597180 MICALL2Q8IY33 904 aa22.44■■□□□ 1.18
IRF3-216ENST00000597180 SMC1BQ8NDV3 1235 aa22.44■■□□□ 1.18
IRF3-216ENST00000597180 MYO3BQ8WXR4 1341 aa22.44■■□□□ 1.18
IRF3-216ENST00000597180 POTEIP0CG38 1075 aa22.43■■□□□ 1.18
IRF3-216ENST00000597180 POTEJP0CG39 1038 aa22.43■■□□□ 1.18
IRF3-216ENST00000597180 GTF2IP78347 998 aa22.43■■□□□ 1.18
IRF3-216ENST00000597180 TFCP2Q12800 502 aa22.43■■□□□ 1.18
IRF3-216ENST00000597180 FSTL1Q12841 308 aa22.43■■□□□ 1.18
IRF3-216ENST00000597180 CAVIN4Q5BKX8 364 aa22.43■■□□□ 1.18
IRF3-216ENST00000597180 SHTN1A0MZ66 631 aa22.42■■□□□ 1.18
IRF3-216ENST00000597180 H7C1D1 291 aa22.42■■□□□ 1.18
IRF3-216ENST00000597180 SASH1O94885 1247 aa22.42■■□□□ 1.18
IRF3-216ENST00000597180 EAPPQ56P03 285 aaPredicted RBP22.42■■□□□ 1.18
IRF3-216ENST00000597180 FAM205AQ6ZU69 1335 aa22.41■■□□□ 1.18
IRF3-216ENST00000597180 SURF6O75683 361 aaKnown RBP22.41■■□□□ 1.18
IRF3-216ENST00000597180 BCAMP50895 628 aa22.41■■□□□ 1.18
IRF3-216ENST00000597180 ZNF280AP59817 542 aaPredicted RBP22.41■■□□□ 1.18
IRF3-216ENST00000597180 FKBP1AP62942 108 aaKnown RBP22.41■■□□□ 1.18
IRF3-216ENST00000597180 VPS37DQ86XT2 251 aa22.41■■□□□ 1.18
IRF3-216ENST00000597180 SIRT2Q8IXJ6 389 aa22.41■■□□□ 1.18
IRF3-216ENST00000597180 FBXW7Q969H0 707 aa22.41■■□□□ 1.18
IRF3-216ENST00000597180 MXD3Q9BW11 206 aa22.41■■□□□ 1.18
IRF3-216ENST00000597180 AKAP2Q9Y2D5 859 aa22.41■■□□□ 1.18
IRF3-216ENST00000597180 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.41■■□□□ 1.18
IRF3-216ENST00000597180 CHADLQ6NUI6 762 aa22.4■■□□□ 1.18
IRF3-216ENST00000597180 POLR2AP24928 1970 aaKnown RBP22.39■■□□□ 1.18
IRF3-216ENST00000597180 HMMRO75330 724 aa22.39■■□□□ 1.17
IRF3-216ENST00000597180 USP17L8P0C7I0 530 aa22.39■■□□□ 1.17
IRF3-216ENST00000597180 TRPM4Q8TD43 1214 aa22.39■■□□□ 1.17
IRF3-216ENST00000597180 A0A1B0GUL7 405 aa22.38■■□□□ 1.17
IRF3-216ENST00000597180 ZBTB22O15209 634 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms