RNA–Protein interactions for RNA: ENST00000594190.5

USHBP1-204, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-204ENST00000594190 MAP2K1Q02750 393 aaPredicted RBP19.98■□□□□ 0.79
USHBP1-204ENST00000594190 MTX1Q13505 466 aa19.98■□□□□ 0.79
USHBP1-204ENST00000594190 SIRT2Q8IXJ6 389 aa19.98■□□□□ 0.79
USHBP1-204ENST00000594190 DCTPP1Q9H773 170 aa19.98■□□□□ 0.79
USHBP1-204ENST00000594190 RAD17O75943 681 aa19.97■□□□□ 0.79
USHBP1-204ENST00000594190 CST9Q5W186 159 aa19.97■□□□□ 0.79
USHBP1-204ENST00000594190 TBC1D16Q8TBP0 767 aa19.97■□□□□ 0.79
USHBP1-204ENST00000594190 JARID2Q92833 1246 aaPredicted RBP19.97■□□□□ 0.79
USHBP1-204ENST00000594190 ABT1Q9ULW3 272 aaKnown RBP19.97■□□□□ 0.79
USHBP1-204ENST00000594190 NSFL1CQ9UNZ2 370 aaKnown RBP19.97■□□□□ 0.79
USHBP1-204ENST00000594190 RTL9Q8NET4 1388 aa19.96■□□□□ 0.79
USHBP1-204ENST00000594190 SHTN1A0MZ66 631 aa19.96■□□□□ 0.79
USHBP1-204ENST00000594190 WASHC4Q2M389 1173 aa19.96■□□□□ 0.79
USHBP1-204ENST00000594190 WDR33Q9C0J8 1336 aaKnown RBP19.96■□□□□ 0.79
USHBP1-204ENST00000594190 A0A1B0GUL6 1792 aa19.95■□□□□ 0.78
USHBP1-204ENST00000594190 ZNF609O15014 1411 aa19.95■□□□□ 0.78
USHBP1-204ENST00000594190 TNIP1Q15025 636 aa19.95■□□□□ 0.78
USHBP1-204ENST00000594190 SSH3Q8TE77 659 aa19.95■□□□□ 0.78
USHBP1-204ENST00000594190 ZBTB47Q9UFB7 747 aaPredicted RBP19.95■□□□□ 0.78
USHBP1-204ENST00000594190 H7C1W4 665 aa19.94■□□□□ 0.78
USHBP1-204ENST00000594190 HSPA8P11142 646 aaKnown RBP19.94■□□□□ 0.78
USHBP1-204ENST00000594190 TRPM4Q8TD43 1214 aa19.94■□□□□ 0.78
USHBP1-204ENST00000594190 DPF2Q92785 391 aa19.94■□□□□ 0.78
USHBP1-204ENST00000594190 ABHD8Q96I13 439 aa19.94■□□□□ 0.78
USHBP1-204ENST00000594190 DBNDD1Q9H9R9 158 aa19.94■□□□□ 0.78
USHBP1-204ENST00000594190 KCNQ5Q9NR82 932 aa19.94■□□□□ 0.78
USHBP1-204ENST00000594190 TRAF5O00463 557 aa19.93■□□□□ 0.78
USHBP1-204ENST00000594190 PSMD14O00487 310 aa19.93■□□□□ 0.78
USHBP1-204ENST00000594190 HSP90B1P14625 803 aaKnown RBP19.93■□□□□ 0.78
USHBP1-204ENST00000594190 CASP7P55210 303 aa19.93■□□□□ 0.78
USHBP1-204ENST00000594190 NUCB1Q02818 461 aa19.93■□□□□ 0.78
USHBP1-204ENST00000594190 CCDC152Q4G0S7 254 aa19.93■□□□□ 0.78
USHBP1-204ENST00000594190 HSP90AB4PQ58FF6 505 aa19.93■□□□□ 0.78
USHBP1-204ENST00000594190 TTLL11Q8NHH1 800 aa19.93■□□□□ 0.78
USHBP1-204ENST00000594190 ZC3H15Q8WU90 426 aaKnown RBP19.93■□□□□ 0.78
USHBP1-204ENST00000594190 GPR101Q96P66 508 aaPredicted RBP19.93■□□□□ 0.78
USHBP1-204ENST00000594190 CTSWP56202 376 aa19.92■□□□□ 0.78
USHBP1-204ENST00000594190 POLA2Q14181 598 aa19.92■□□□□ 0.78
USHBP1-204ENST00000594190 CNOT7Q9UIV1 285 aaKnown RBP19.92■□□□□ 0.78
USHBP1-204ENST00000594190 ZBTB12Q9Y330 459 aaPredicted RBP19.92■□□□□ 0.78
USHBP1-204ENST00000594190 RIMBP2O15034 1052 aa19.91■□□□□ 0.78
USHBP1-204ENST00000594190 ECE2O60344 883 aa19.91■□□□□ 0.78
USHBP1-204ENST00000594190 PAXIP1Q6ZW49 1069 aaPredicted RBP19.91■□□□□ 0.78
USHBP1-204ENST00000594190 BEGAINQ9BUH8 593 aa19.91■□□□□ 0.78
USHBP1-204ENST00000594190 C6orf229H3BNL8 230 aa19.9■□□□□ 0.78
USHBP1-204ENST00000594190 SRGAP3O43295 1099 aa19.9■□□□□ 0.78
USHBP1-204ENST00000594190 RAB11FIP3O75154 756 aa19.9■□□□□ 0.78
USHBP1-204ENST00000594190 EGFRP00533 1210 aa19.9■□□□□ 0.78
USHBP1-204ENST00000594190 UBE3BQ7Z3V4 1068 aa19.9■□□□□ 0.78
USHBP1-204ENST00000594190 CHD1LQ86WJ1 897 aa19.9■□□□□ 0.78
USHBP1-204ENST00000594190 MICALL2Q8IY33 904 aa19.9■□□□□ 0.78
USHBP1-204ENST00000594190 SUCLG2Q96I99 432 aa19.9■□□□□ 0.78
USHBP1-204ENST00000594190 EYA3Q99504 573 aa19.9■□□□□ 0.78
USHBP1-204ENST00000594190 PLA2G12BQ9BX93 195 aa19.9■□□□□ 0.78
USHBP1-204ENST00000594190 TLL2Q9Y6L7 1015 aa19.9■□□□□ 0.78
USHBP1-204ENST00000594190 VIL1P09327 827 aaKnown RBP19.89■□□□□ 0.77
USHBP1-204ENST00000594190 ECE1P42892 770 aa19.89■□□□□ 0.77
USHBP1-204ENST00000594190 DOK7Q18PE1 504 aa19.89■□□□□ 0.77
USHBP1-204ENST00000594190 RABL6Q3YEC7 729 aaPredicted RBP19.89■□□□□ 0.77
USHBP1-204ENST00000594190 CCDC85AQ96PX6 553 aaPredicted RBP19.89■□□□□ 0.77
USHBP1-204ENST00000594190 GREM2Q9H772 168 aa19.89■□□□□ 0.77
USHBP1-204ENST00000594190 PNMA6EA0A0J9YXQ4 647 aa19.88■□□□□ 0.77
USHBP1-204ENST00000594190 WTIPA6NIX2 430 aaPredicted RBP19.88■□□□□ 0.77
USHBP1-204ENST00000594190 RPS12P25398 132 aaKnown RBP19.88■□□□□ 0.77
USHBP1-204ENST00000594190 ANKRD45Q5TZF3 282 aa19.88■□□□□ 0.77
USHBP1-204ENST00000594190 GLIS2Q9BZE0 524 aaPredicted RBP19.88■□□□□ 0.77
USHBP1-204ENST00000594190 BICC1Q9H694 974 aaKnown RBP19.88■□□□□ 0.77
USHBP1-204ENST00000594190 XDHP47989 1333 aa19.87■□□□□ 0.77
USHBP1-204ENST00000594190 UFL1O94874 794 aa19.87■□□□□ 0.77
USHBP1-204ENST00000594190 GRM1Q13255 1194 aa19.87■□□□□ 0.77
USHBP1-204ENST00000594190 FAM161AQ3B820 660 aa19.87■□□□□ 0.77
USHBP1-204ENST00000594190 SAMD7Q7Z3H4 446 aa19.87■□□□□ 0.77
USHBP1-204ENST00000594190 ANKRD18AQ8IVF6 992 aa19.87■□□□□ 0.77
USHBP1-204ENST00000594190 CAPNS2Q96L46 248 aa19.87■□□□□ 0.77
USHBP1-204ENST00000594190 BSDC1Q9NW68 430 aaPredicted RBP19.87■□□□□ 0.77
USHBP1-204ENST00000594190 GGA1Q9UJY5 639 aa19.87■□□□□ 0.77
USHBP1-204ENST00000594190 MINPP1Q9UNW1 487 aa19.87■□□□□ 0.77
USHBP1-204ENST00000594190 NOP58Q9Y2X3 529 aaKnown RBP19.87■□□□□ 0.77
USHBP1-204ENST00000594190 CSF1RP07333 972 aa19.86■□□□□ 0.77
USHBP1-204ENST00000594190 SAPCD2Q86UD0 394 aa19.86■□□□□ 0.77
USHBP1-204ENST00000594190 ERC1Q8IUD2 1116 aa19.86■□□□□ 0.77
USHBP1-204ENST00000594190 KAZALD1Q96I82 304 aa19.86■□□□□ 0.77
USHBP1-204ENST00000594190 GMLQ99445 158 aa19.86■□□□□ 0.77
USHBP1-204ENST00000594190 ZC3H12CQ9C0D7 883 aaKnown RBP19.86■□□□□ 0.77
USHBP1-204ENST00000594190 H7C1D1 291 aa19.85■□□□□ 0.77
USHBP1-204ENST00000594190 SLC34A2O95436 690 aa19.85■□□□□ 0.77
USHBP1-204ENST00000594190 ANKIB1Q9P2G1 1089 aa19.85■□□□□ 0.77
USHBP1-204ENST00000594190 MED23Q9ULK4 1368 aa19.84■□□□□ 0.77
USHBP1-204ENST00000594190 CCDC85CA6NKD9 419 aa19.84■□□□□ 0.77
USHBP1-204ENST00000594190 ATP2B4P23634 1241 aa19.84■□□□□ 0.77
USHBP1-204ENST00000594190 RGS3P49796 1198 aa19.84■□□□□ 0.77
USHBP1-204ENST00000594190 CYP4F22Q6NT55 531 aa19.84■□□□□ 0.77
USHBP1-204ENST00000594190 CDC37L1Q7L3B6 337 aa19.84■□□□□ 0.77
USHBP1-204ENST00000594190 HHIPL1Q96JK4 782 aa19.84■□□□□ 0.77
USHBP1-204ENST00000594190 CDC5LQ99459 802 aaKnown RBP19.84■□□□□ 0.77
USHBP1-204ENST00000594190 LRRCC1Q9C099 1032 aa19.84■□□□□ 0.77
USHBP1-204ENST00000594190 SURF6O75683 361 aaKnown RBP19.83■□□□□ 0.77
USHBP1-204ENST00000594190 ZNF280AP59817 542 aaPredicted RBP19.83■□□□□ 0.77
USHBP1-204ENST00000594190 DLK2Q6UY11 383 aa19.83■□□□□ 0.77
USHBP1-204ENST00000594190 KIF1BPQ96EK5 621 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms