RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 LSG1Q9H089 658 aaKnown RBP16.98■□□□□ 0.31
RETREG3-208ENST00000589797 ERVV-2B6SEH9 535 aa16.98■□□□□ 0.31
RETREG3-208ENST00000589797 ZBTB43O43298 467 aa16.98■□□□□ 0.31
RETREG3-208ENST00000589797 ATP5JP18859 108 aa16.98■□□□□ 0.31
RETREG3-208ENST00000589797 DNAJC25Q9H1X3 360 aa16.98■□□□□ 0.31
RETREG3-208ENST00000589797 POLR1AO95602 1720 aaPredicted RBP16.98■□□□□ 0.31
RETREG3-208ENST00000589797 LARGE1O95461 756 aa16.98■□□□□ 0.31
RETREG3-208ENST00000589797 RPGRQ92834 1020 aaKnown RBP16.98■□□□□ 0.31
RETREG3-208ENST00000589797 TSPY2A6NKD2 308 aa16.98■□□□□ 0.31
RETREG3-208ENST00000589797 hCG_1642624A0A1W2PR95 340 aa16.97■□□□□ 0.31
RETREG3-208ENST00000589797 ZFYP08048 801 aaPredicted RBP16.97■□□□□ 0.31
RETREG3-208ENST00000589797 UQCRFS1P1P0C7P4 283 aa16.97■□□□□ 0.31
RETREG3-208ENST00000589797 KIF2CQ99661 725 aa16.97■□□□□ 0.31
RETREG3-208ENST00000589797 RRAGDQ9NQL2 400 aaPredicted RBP16.97■□□□□ 0.31
RETREG3-208ENST00000589797 CD163L1Q9NR16 1453 aa16.97■□□□□ 0.31
RETREG3-208ENST00000589797 TPM3P06753 285 aa16.97■□□□□ 0.31
RETREG3-208ENST00000589797 SSRP1Q08945 709 aaKnown RBP16.97■□□□□ 0.31
RETREG3-208ENST00000589797 TRMT1Q9NXH9 659 aaKnown RBP16.97■□□□□ 0.31
RETREG3-208ENST00000589797 MPHOSPH10O00566 681 aaKnown RBP16.96■□□□□ 0.31
RETREG3-208ENST00000589797 ANO6Q4KMQ2 910 aa16.96■□□□□ 0.31
RETREG3-208ENST00000589797 WDR17Q8IZU2 1322 aa16.96■□□□□ 0.31
RETREG3-208ENST00000589797 CRB1P82279 1406 aa16.96■□□□□ 0.31
RETREG3-208ENST00000589797 TSR1Q2NL82 804 aaKnown RBP16.96■□□□□ 0.31
RETREG3-208ENST00000589797 NAA16Q6N069 864 aaPredicted RBP16.96■□□□□ 0.31
RETREG3-208ENST00000589797 IL25Q9H293 177 aa16.96■□□□□ 0.31
RETREG3-208ENST00000589797 BRD1O95696 1058 aa16.95■□□□□ 0.3
RETREG3-208ENST00000589797 WTAPQ15007 396 aa16.95■□□□□ 0.3
RETREG3-208ENST00000589797 CFAP100Q494V2 611 aa16.95■□□□□ 0.3
RETREG3-208ENST00000589797 CMTR1Q8N1G2 835 aaKnown RBP16.95■□□□□ 0.3
RETREG3-208ENST00000589797 PHKBQ93100 1093 aa16.95■□□□□ 0.3
RETREG3-208ENST00000589797 VWDEQ8N2E2 1590 aa16.95■□□□□ 0.3
RETREG3-208ENST00000589797 MROH1Q8NDA8 1641 aa16.95■□□□□ 0.3
RETREG3-208ENST00000589797 HLFQ16534 295 aa16.95■□□□□ 0.3
RETREG3-208ENST00000589797 CTCFLQ8NI51 663 aaPredicted RBP16.95■□□□□ 0.3
RETREG3-208ENST00000589797 COPRSQ9NQ92 184 aa16.95■□□□□ 0.3
RETREG3-208ENST00000589797 SSBP05455 408 aaKnown RBP eCLIP16.95■□□□□ 0.3
RETREG3-208ENST00000589797 CTDSPL2Q05D32 466 aa16.95■□□□□ 0.3
RETREG3-208ENST00000589797 POLA2Q14181 598 aa16.95■□□□□ 0.3
RETREG3-208ENST00000589797 LUZP1Q86V48 1076 aa16.95■□□□□ 0.3
RETREG3-208ENST00000589797 ZHX3Q9H4I2 956 aa16.95■□□□□ 0.3
RETREG3-208ENST00000589797 SEC31BQ9NQW1 1179 aa16.95■□□□□ 0.3
RETREG3-208ENST00000589797 ADGRL3Q9HAR2 1447 aa16.95■□□□□ 0.3
RETREG3-208ENST00000589797 SPATA31A3Q5VYP0 1347 aa16.94■□□□□ 0.3
RETREG3-208ENST00000589797 A0A1B0GVL5 298 aa16.94■□□□□ 0.3
RETREG3-208ENST00000589797 USP31Q70CQ4 1352 aa16.94■□□□□ 0.3
RETREG3-208ENST00000589797 PDE8AO60658 829 aa16.94■□□□□ 0.3
RETREG3-208ENST00000589797 ZNF444Q8N0Y2 327 aaPredicted RBP16.94■□□□□ 0.3
RETREG3-208ENST00000589797 GPT2Q8TD30 523 aa16.94■□□□□ 0.3
RETREG3-208ENST00000589797 CARD10Q9BWT7 1032 aa16.94■□□□□ 0.3
RETREG3-208ENST00000589797 BCAMP50895 628 aa16.94■□□□□ 0.3
RETREG3-208ENST00000589797 AOX1Q06278 1338 aa16.94■□□□□ 0.3
RETREG3-208ENST00000589797 TPM1P09493 284 aa16.94■□□□□ 0.3
RETREG3-208ENST00000589797 ZNF532Q9HCE3 1301 aa16.93■□□□□ 0.3
RETREG3-208ENST00000589797 CYP21A2P08686 494 aa16.93■□□□□ 0.3
RETREG3-208ENST00000589797 PHKA1P46020 1223 aa16.93■□□□□ 0.3
RETREG3-208ENST00000589797 OVOS2A0A0J9YW53 1432 aa16.93■□□□□ 0.3
RETREG3-208ENST00000589797 OVOS2Q6IE36 1432 aa16.93■□□□□ 0.3
RETREG3-208ENST00000589797 CCDC87Q9NVE4 849 aa16.93■□□□□ 0.3
RETREG3-208ENST00000589797 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.93■□□□□ 0.3
RETREG3-208ENST00000589797 RTCBQ9Y3I0 505 aaKnown RBP16.93■□□□□ 0.3
RETREG3-208ENST00000589797 RIMBP2O15034 1052 aa16.93■□□□□ 0.3
RETREG3-208ENST00000589797 HSPD1P10809 573 aaKnown RBP16.93■□□□□ 0.3
RETREG3-208ENST00000589797 GYG1P46976 350 aa16.93■□□□□ 0.3
RETREG3-208ENST00000589797 CNNM3Q8NE01 707 aa16.93■□□□□ 0.3
RETREG3-208ENST00000589797 GPHNQ9NQX3 736 aaPredicted RBP16.93■□□□□ 0.3
RETREG3-208ENST00000589797 IQSEC2Q5JU85 1478 aa16.92■□□□□ 0.3
RETREG3-208ENST00000589797 NBPF26B4DH59 902 aa16.92■□□□□ 0.3
RETREG3-208ENST00000589797 E7EWF7 191 aa16.92■□□□□ 0.3
RETREG3-208ENST00000589797 NBPF14Q5TI25 921 aa16.92■□□□□ 0.3
RETREG3-208ENST00000589797 NBPF10Q6P3W6 841 aaKnown RBP16.92■□□□□ 0.3
RETREG3-208ENST00000589797 VSIG10Q8N0Z9 540 aa16.92■□□□□ 0.3
RETREG3-208ENST00000589797 NBPF15Q8N660 670 aa16.92■□□□□ 0.3
RETREG3-208ENST00000589797 ZNF622Q969S3 477 aaKnown RBP eCLIP16.92■□□□□ 0.3
RETREG3-208ENST00000589797 NLRP5P59047 1200 aa16.92■□□□□ 0.3
RETREG3-208ENST00000589797 SPECC1Q5M775 1068 aa16.92■□□□□ 0.3
RETREG3-208ENST00000589797 TPTE2Q6XPS3 522 aa16.92■□□□□ 0.3
RETREG3-208ENST00000589797 NOC3LQ8WTT2 800 aaKnown RBP16.92■□□□□ 0.3
RETREG3-208ENST00000589797 C16orf45Q96MC5 204 aaPredicted RBP16.92■□□□□ 0.3
RETREG3-208ENST00000589797 DDX19AQ9NUU7 478 aaKnown RBP16.92■□□□□ 0.3
RETREG3-208ENST00000589797 CLIP2Q9UDT6 1046 aa16.92■□□□□ 0.3
RETREG3-208ENST00000589797 ADCY9O60503 1353 aa16.92■□□□□ 0.3
RETREG3-208ENST00000589797 MED14O60244 1454 aa16.92■□□□□ 0.3
RETREG3-208ENST00000589797 UQCRHLA0A096LP55 91 aa16.92■□□□□ 0.3
RETREG3-208ENST00000589797 UQCRHP07919 91 aa16.92■□□□□ 0.3
RETREG3-208ENST00000589797 CATIPQ7Z7H3 387 aa16.92■□□□□ 0.3
RETREG3-208ENST00000589797 ANKRD20A12PQ8NF67 263 aa16.92■□□□□ 0.3
RETREG3-208ENST00000589797 APPBP2Q92624 585 aa16.92■□□□□ 0.3
RETREG3-208ENST00000589797 TRMT1LQ7Z2T5 733 aaKnown RBP16.91■□□□□ 0.3
RETREG3-208ENST00000589797 C17orf53Q8N3J3 647 aaPredicted RBP16.91■□□□□ 0.3
RETREG3-208ENST00000589797 MAP4K1Q92918 833 aa16.91■□□□□ 0.3
RETREG3-208ENST00000589797 RNF41Q9H4P4 317 aaPredicted RBP16.91■□□□□ 0.3
RETREG3-208ENST00000589797 FGAP02671 866 aa16.91■□□□□ 0.3
RETREG3-208ENST00000589797 CPLX3Q8WVH0 158 aa16.91■□□□□ 0.3
RETREG3-208ENST00000589797 CCDC196A0A1B0GTZ2 297 aa16.91■□□□□ 0.3
RETREG3-208ENST00000589797 TMX1Q9H3N1 280 aa16.91■□□□□ 0.3
RETREG3-208ENST00000589797 CCNL1Q9UK58 526 aaPredicted RBP16.91■□□□□ 0.3
RETREG3-208ENST00000589797 ADD1P35611 737 aaKnown RBP16.9■□□□□ 0.3
RETREG3-208ENST00000589797 ZSCAN16Q9H4T2 348 aaPredicted RBP16.9■□□□□ 0.3
RETREG3-208ENST00000589797 HELLSQ9NRZ9 838 aa16.9■□□□□ 0.3
RETREG3-208ENST00000589797 MCM9Q9NXL9 1143 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms