RNA–Protein interactions for RNA: ENST00000588957.5

GFAP-215, Transcript of glial fibrillary acidic protein, humanhuman

TSL 3

Gene GFAP, Length 578 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-215ENST00000588957 KIAA2012Q0VF49 1180 aa17.59■□□□□ 0.41
GFAP-215ENST00000588957 PODNQ7Z5L7 613 aa17.59■□□□□ 0.41
GFAP-215ENST00000588957 KIAA1551Q9HCM1 1747 aa17.58■□□□□ 0.41
GFAP-215ENST00000588957 SEMA3EO15041 775 aa17.58■□□□□ 0.4
GFAP-215ENST00000588957 PPIP5K2O43314 1243 aa17.58■□□□□ 0.4
GFAP-215ENST00000588957 UQCRFS1P1P0C7P4 283 aa17.58■□□□□ 0.4
GFAP-215ENST00000588957 IARSP41252 1262 aaKnown RBP17.58■□□□□ 0.4
GFAP-215ENST00000588957 TIMM10P62072 90 aa17.58■□□□□ 0.4
GFAP-215ENST00000588957 B4GALNT3Q6L9W6 998 aa17.58■□□□□ 0.4
GFAP-215ENST00000588957 LARGE2Q8N3Y3 721 aa17.58■□□□□ 0.4
GFAP-215ENST00000588957 IL1RAPL2Q9NP60 686 aa17.58■□□□□ 0.4
GFAP-215ENST00000588957 YBX3P16989 372 aaKnown RBP eCLIP17.57■□□□□ 0.4
GFAP-215ENST00000588957 OLFM4Q6UX06 510 aa17.57■□□□□ 0.4
GFAP-215ENST00000588957 EAF2Q96CJ1 260 aaPredicted RBP17.57■□□□□ 0.4
GFAP-215ENST00000588957 XAGE2Q96GT9 111 aa17.57■□□□□ 0.4
GFAP-215ENST00000588957 KDM2BQ8NHM5 1336 aa17.56■□□□□ 0.4
GFAP-215ENST00000588957 ERC2O15083 957 aa17.56■□□□□ 0.4
GFAP-215ENST00000588957 IGSF3O75054 1194 aa17.56■□□□□ 0.4
GFAP-215ENST00000588957 FRAT2O75474 233 aaPredicted RBP17.56■□□□□ 0.4
GFAP-215ENST00000588957 FBXO33Q7Z6M2 555 aa17.56■□□□□ 0.4
GFAP-215ENST00000588957 NIM1KQ8IY84 436 aa17.56■□□□□ 0.4
GFAP-215ENST00000588957 ZNF512BQ96KM6 892 aaPredicted RBP17.56■□□□□ 0.4
GFAP-215ENST00000588957 GTF3C3Q9Y5Q9 886 aa17.56■□□□□ 0.4
GFAP-215ENST00000588957 BRCA1P38398 1863 aaKnown RBP17.56■□□□□ 0.4
GFAP-215ENST00000588957 TTC41PQ6P2S7 1318 aa17.55■□□□□ 0.4
GFAP-215ENST00000588957 NFKBIEO00221 500 aa17.55■□□□□ 0.4
GFAP-215ENST00000588957 TTC39AQ5SRH9 613 aa17.55■□□□□ 0.4
GFAP-215ENST00000588957 FAM84BQ96KN1 310 aaPredicted RBP17.55■□□□□ 0.4
GFAP-215ENST00000588957 ZNF277Q9NRM2 450 aaPredicted RBP17.55■□□□□ 0.4
GFAP-215ENST00000588957 LRRC37AA6NMS7 1700 aa17.55■□□□□ 0.4
GFAP-215ENST00000588957 SNED1Q8TER0 1413 aa17.55■□□□□ 0.4
GFAP-215ENST00000588957 ARFGEF1Q9Y6D6 1849 aa17.54■□□□□ 0.4
GFAP-215ENST00000588957 RIMBP2O15034 1052 aa17.54■□□□□ 0.4
GFAP-215ENST00000588957 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.54■□□□□ 0.4
GFAP-215ENST00000588957 LNPKQ9C0E8 428 aa17.54■□□□□ 0.4
GFAP-215ENST00000588957 CCDC8Q9H0W5 538 aaPredicted RBP17.54■□□□□ 0.4
GFAP-215ENST00000588957 CD209Q9NNX6 404 aa17.54■□□□□ 0.4
GFAP-215ENST00000588957 ECHDC1Q9NTX5 307 aa17.54■□□□□ 0.4
GFAP-215ENST00000588957 DENND2AQ9ULE3 1009 aa17.54■□□□□ 0.4
GFAP-215ENST00000588957 ZNRF3Q9ULT6 936 aa17.54■□□□□ 0.4
GFAP-215ENST00000588957 TAF1P21675 1872 aa17.54■□□□□ 0.4
GFAP-215ENST00000588957 ZC3H4Q9UPT8 1303 aaKnown RBP17.53■□□□□ 0.4
GFAP-215ENST00000588957 AOC3Q16853 763 aa17.53■□□□□ 0.4
GFAP-215ENST00000588957 CCDC102BQ68D86 513 aa17.53■□□□□ 0.4
GFAP-215ENST00000588957 DBNLQ9UJU6 430 aaKnown RBP17.53■□□□□ 0.4
GFAP-215ENST00000588957 ZNF609O15014 1411 aa17.53■□□□□ 0.4
GFAP-215ENST00000588957 SMARCA5O60264 1052 aaPredicted RBP17.52■□□□□ 0.4
GFAP-215ENST00000588957 GLRX3O76003 335 aaKnown RBP17.52■□□□□ 0.4
GFAP-215ENST00000588957 IL1R1P14778 569 aa17.52■□□□□ 0.4
GFAP-215ENST00000588957 MX1P20591 662 aa17.52■□□□□ 0.4
GFAP-215ENST00000588957 GYG1P46976 350 aa17.52■□□□□ 0.4
GFAP-215ENST00000588957 BCAMP50895 628 aa17.52■□□□□ 0.4
GFAP-215ENST00000588957 EIF6P56537 245 aaKnown RBP17.52■□□□□ 0.4
GFAP-215ENST00000588957 TNIP1Q15025 636 aa17.52■□□□□ 0.4
GFAP-215ENST00000588957 ZGPATQ8N5A5 531 aaKnown RBP17.52■□□□□ 0.4
GFAP-215ENST00000588957 TDRD7Q8NHU6 1098 aaKnown RBP17.52■□□□□ 0.4
GFAP-215ENST00000588957 TBC1D22AQ8WUA7 517 aa17.52■□□□□ 0.4
GFAP-215ENST00000588957 DBNDD2Q9BQY9 259 aa17.52■□□□□ 0.4
GFAP-215ENST00000588957 BCL11AQ9H165 835 aa17.52■□□□□ 0.4
GFAP-215ENST00000588957 PDS5AQ29RF7 1337 aaKnown RBP17.51■□□□□ 0.39
GFAP-215ENST00000588957 SNAP23O00161 211 aa17.51■□□□□ 0.39
GFAP-215ENST00000588957 ATP5JP18859 108 aa17.51■□□□□ 0.39
GFAP-215ENST00000588957 MMP14P50281 582 aa17.51■□□□□ 0.39
GFAP-215ENST00000588957 WDR66Q8TBY9 1149 aa17.51■□□□□ 0.39
GFAP-215ENST00000588957 AOX1Q06278 1338 aa17.5■□□□□ 0.39
GFAP-215ENST00000588957 IRS2Q9Y4H2 1338 aa17.5■□□□□ 0.39
GFAP-215ENST00000588957 ECE2O60344 883 aa17.5■□□□□ 0.39
GFAP-215ENST00000588957 ARID4AP29374 1257 aaPredicted RBP17.5■□□□□ 0.39
GFAP-215ENST00000588957 DPY19L2Q6NUT2 758 aa17.5■□□□□ 0.39
GFAP-215ENST00000588957 OSBPL3Q9H4L5 887 aa17.5■□□□□ 0.39
GFAP-215ENST00000588957 STAP2Q9UGK3 403 aa17.5■□□□□ 0.39
GFAP-215ENST00000588957 COL4A1P02462 1669 aa17.49■□□□□ 0.39
GFAP-215ENST00000588957 USP17L3A6NCW0 530 aa17.49■□□□□ 0.39
GFAP-215ENST00000588957 USP17L4A6NCW7 530 aa17.49■□□□□ 0.39
GFAP-215ENST00000588957 ADORA1P30542 326 aa17.49■□□□□ 0.39
GFAP-215ENST00000588957 FKBP1AP62942 108 aaKnown RBP17.49■□□□□ 0.39
GFAP-215ENST00000588957 RASSF7Q02833 373 aa17.49■□□□□ 0.39
GFAP-215ENST00000588957 TTF1Q15361 905 aaPredicted RBP17.49■□□□□ 0.39
GFAP-215ENST00000588957 DOK7Q18PE1 504 aa17.49■□□□□ 0.39
GFAP-215ENST00000588957 LRRFIP1Q32MZ4 808 aaKnown RBP17.49■□□□□ 0.39
GFAP-215ENST00000588957 STRIP1Q5VSL9 837 aa17.49■□□□□ 0.39
GFAP-215ENST00000588957 SPTY2D1Q68D10 685 aaPredicted RBP17.49■□□□□ 0.39
GFAP-215ENST00000588957 TTLL5Q6EMB2 1281 aa17.49■□□□□ 0.39
GFAP-215ENST00000588957 TMED8Q6PL24 325 aaPredicted RBP17.49■□□□□ 0.39
GFAP-215ENST00000588957 USP17L1Q7RTZ2 530 aa17.49■□□□□ 0.39
GFAP-215ENST00000588957 TXNRD3Q86VQ6 643 aa17.49■□□□□ 0.39
GFAP-215ENST00000588957 TICAM2Q86XR7 235 aa17.49■□□□□ 0.39
GFAP-215ENST00000588957 RNF181Q9P0P0 153 aa17.49■□□□□ 0.39
GFAP-215ENST00000588957 SUGT1Q9Y2Z0 365 aa17.49■□□□□ 0.39
GFAP-215ENST00000588957 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.49■□□□□ 0.39
GFAP-215ENST00000588957 MYO3BQ8WXR4 1341 aa17.48■□□□□ 0.39
GFAP-215ENST00000588957 CACNA1SQ13698 1873 aa17.48■□□□□ 0.39
GFAP-215ENST00000588957 FZD9O00144 591 aa17.48■□□□□ 0.39
GFAP-215ENST00000588957 PHKA1P46020 1223 aa17.48■□□□□ 0.39
GFAP-215ENST00000588957 PDE1AP54750 535 aa17.48■□□□□ 0.39
GFAP-215ENST00000588957 C9orf131Q5VYM1 1079 aa17.48■□□□□ 0.39
GFAP-215ENST00000588957 DBNDD1Q9H9R9 158 aa17.48■□□□□ 0.39
GFAP-215ENST00000588957 FER1L6Q2WGJ9 1857 aa17.48■□□□□ 0.39
GFAP-215ENST00000588957 FAM205AQ6ZU69 1335 aa17.47■□□□□ 0.39
GFAP-215ENST00000588957 SPEF2Q9C093 1822 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms