RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 CCDC102BQ68D86 513 aa17.68■□□□□ 0.42
NPC1-207ENST00000588867 CD2APQ9Y5K6 639 aa17.68■□□□□ 0.42
NPC1-207ENST00000588867 SLX4Q8IY92 1834 aa17.68■□□□□ 0.42
NPC1-207ENST00000588867 UFL1O94874 794 aa17.67■□□□□ 0.42
NPC1-207ENST00000588867 PHKA1P46020 1223 aa17.67■□□□□ 0.42
NPC1-207ENST00000588867 GYG1P46976 350 aa17.67■□□□□ 0.42
NPC1-207ENST00000588867 CAVIN4Q5BKX8 364 aa17.67■□□□□ 0.42
NPC1-207ENST00000588867 MPNDQ8N594 471 aa17.67■□□□□ 0.42
NPC1-207ENST00000588867 DNAJC2Q99543 621 aaKnown RBP17.67■□□□□ 0.42
NPC1-207ENST00000588867 GGA1Q9UJY5 639 aa17.67■□□□□ 0.42
NPC1-207ENST00000588867 WWC3Q9ULE0 1092 aa17.67■□□□□ 0.42
NPC1-207ENST00000588867 NDUFB9Q9Y6M9 179 aa17.67■□□□□ 0.42
NPC1-207ENST00000588867 C6orf229H3BNL8 230 aa17.67■□□□□ 0.42
NPC1-207ENST00000588867 ATP2B4P23634 1241 aa17.67■□□□□ 0.42
NPC1-207ENST00000588867 VPS37DQ86XT2 251 aa17.67■□□□□ 0.42
NPC1-207ENST00000588867 KLRK1P26718 216 aa17.66■□□□□ 0.42
NPC1-207ENST00000588867 GPR101Q96P66 508 aaPredicted RBP17.66■□□□□ 0.42
NPC1-207ENST00000588867 PODXL2Q9NZ53 605 aa17.66■□□□□ 0.42
NPC1-207ENST00000588867 PIM2Q9P1W9 311 aa17.66■□□□□ 0.42
NPC1-207ENST00000588867 FKBP4Q02790 459 aaKnown RBP eCLIP17.65■□□□□ 0.42
NPC1-207ENST00000588867 DPP8Q6V1X1 898 aaPredicted RBP17.65■□□□□ 0.42
NPC1-207ENST00000588867 CNTROBQ8N137 903 aa17.65■□□□□ 0.42
NPC1-207ENST00000588867 TBC1D16Q8TBP0 767 aa17.65■□□□□ 0.42
NPC1-207ENST00000588867 SNRKQ9NRH2 765 aa17.65■□□□□ 0.42
NPC1-207ENST00000588867 POLLQ9UGP5 575 aa17.65■□□□□ 0.42
NPC1-207ENST00000588867 DLEC1Q9Y238 1755 aa17.65■□□□□ 0.42
NPC1-207ENST00000588867 ARAP2Q8WZ64 1704 aa17.65■□□□□ 0.42
NPC1-207ENST00000588867 C21orf2O43822 256 aa17.65■□□□□ 0.42
NPC1-207ENST00000588867 UQCRFS1P1P0C7P4 283 aa17.65■□□□□ 0.42
NPC1-207ENST00000588867 FAM84BQ96KN1 310 aaPredicted RBP17.65■□□□□ 0.42
NPC1-207ENST00000588867 HAUS7Q99871 368 aa17.65■□□□□ 0.42
NPC1-207ENST00000588867 LRRC37AA6NMS7 1700 aa17.64■□□□□ 0.41
NPC1-207ENST00000588867 SCARF1Q14162 830 aa17.64■□□□□ 0.41
NPC1-207ENST00000588867 TXNRD3Q86VQ6 643 aa17.64■□□□□ 0.41
NPC1-207ENST00000588867 EDC3Q96F86 508 aaKnown RBP17.64■□□□□ 0.41
NPC1-207ENST00000588867 IQSEC3Q9UPP2 1182 aaPredicted RBP17.64■□□□□ 0.41
NPC1-207ENST00000588867 HIBADHP31937 336 aaKnown RBP17.64■□□□□ 0.41
NPC1-207ENST00000588867 C8orf34Q49A92 452 aa17.64■□□□□ 0.41
NPC1-207ENST00000588867 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.64■□□□□ 0.41
NPC1-207ENST00000588867 EVI5LQ96CN4 794 aa17.64■□□□□ 0.41
NPC1-207ENST00000588867 GNL3LQ9NVN8 582 aaKnown RBP17.64■□□□□ 0.41
NPC1-207ENST00000588867 ARID4AP29374 1257 aaPredicted RBP17.63■□□□□ 0.41
NPC1-207ENST00000588867 MCAMP43121 646 aa17.63■□□□□ 0.41
NPC1-207ENST00000588867 PI16Q6UXB8 463 aa17.63■□□□□ 0.41
NPC1-207ENST00000588867 C7orf43Q8WVR3 580 aa17.63■□□□□ 0.41
NPC1-207ENST00000588867 ZNF512BQ96KM6 892 aaPredicted RBP17.63■□□□□ 0.41
NPC1-207ENST00000588867 GOLIM4O00461 696 aa17.62■□□□□ 0.41
NPC1-207ENST00000588867 SOCS7O14512 581 aa17.62■□□□□ 0.41
NPC1-207ENST00000588867 CDC45O75419 566 aa17.62■□□□□ 0.41
NPC1-207ENST00000588867 FRAT2O75474 233 aaPredicted RBP17.62■□□□□ 0.41
NPC1-207ENST00000588867 DALRD3Q5D0E6 543 aaKnown RBP17.62■□□□□ 0.41
NPC1-207ENST00000588867 FBXO33Q7Z6M2 555 aa17.62■□□□□ 0.41
NPC1-207ENST00000588867 PAG1Q9NWQ8 432 aa17.62■□□□□ 0.41
NPC1-207ENST00000588867 AK9Q5TCS8 1911 aa17.62■□□□□ 0.41
NPC1-207ENST00000588867 RIMBP2O15034 1052 aa17.62■□□□□ 0.41
NPC1-207ENST00000588867 ZAP70P43403 619 aa17.62■□□□□ 0.41
NPC1-207ENST00000588867 CC2D2BQ6DHV5 1058 aa17.62■□□□□ 0.41
NPC1-207ENST00000588867 NLGN2Q8NFZ4 835 aa17.62■□□□□ 0.41
NPC1-207ENST00000588867 KIAA1551Q9HCM1 1747 aa17.61■□□□□ 0.41
NPC1-207ENST00000588867 RASGRF1Q13972 1273 aa17.61■□□□□ 0.41
NPC1-207ENST00000588867 SPATA5Q8NB90 893 aa17.61■□□□□ 0.41
NPC1-207ENST00000588867 FSD1Q9BTV5 496 aa17.61■□□□□ 0.41
NPC1-207ENST00000588867 BACH2Q9BYV9 841 aa17.61■□□□□ 0.41
NPC1-207ENST00000588867 HMG20BQ9P0W2 317 aa17.61■□□□□ 0.41
NPC1-207ENST00000588867 IRS2Q9Y4H2 1338 aa17.61■□□□□ 0.41
NPC1-207ENST00000588867 TBC1D9Q6ZT07 1266 aa17.6■□□□□ 0.41
NPC1-207ENST00000588867 ZNF804AQ7Z570 1209 aa17.6■□□□□ 0.41
NPC1-207ENST00000588867 ZC3H12CQ9C0D7 883 aaKnown RBP17.6■□□□□ 0.41
NPC1-207ENST00000588867 ANTXR1Q9H6X2 564 aa17.6■□□□□ 0.41
NPC1-207ENST00000588867 WASHC4Q2M389 1173 aa17.6■□□□□ 0.41
NPC1-207ENST00000588867 CASC1Q6TDU7 716 aa17.6■□□□□ 0.41
NPC1-207ENST00000588867 C15orf52Q6ZUT6 534 aaKnown RBP17.6■□□□□ 0.41
NPC1-207ENST00000588867 FHDC1Q9C0D6 1143 aaPredicted RBP17.6■□□□□ 0.41
NPC1-207ENST00000588867 CCDC93Q567U6 631 aa17.59■□□□□ 0.41
NPC1-207ENST00000588867 EYA3Q99504 573 aa17.59■□□□□ 0.41
NPC1-207ENST00000588867 BCS1LQ9Y276 419 aa17.59■□□□□ 0.41
NPC1-207ENST00000588867 LTBP1Q14766 1721 aa17.59■□□□□ 0.41
NPC1-207ENST00000588867 AKAP11Q9UKA4 1901 aa17.59■□□□□ 0.41
NPC1-207ENST00000588867 MED23Q9ULK4 1368 aa17.59■□□□□ 0.41
NPC1-207ENST00000588867 G3V3G9 751 aa17.58■□□□□ 0.4
NPC1-207ENST00000588867 CYP2E1P05181 493 aaPredicted RBP17.58■□□□□ 0.4
NPC1-207ENST00000588867 DCAF8Q5TAQ9 597 aa17.58■□□□□ 0.4
NPC1-207ENST00000588867 RTKN2Q8IZC4 609 aa17.58■□□□□ 0.4
NPC1-207ENST00000588867 DENND2AQ9ULE3 1009 aa17.58■□□□□ 0.4
NPC1-207ENST00000588867 CHMLP26374 656 aa17.57■□□□□ 0.4
NPC1-207ENST00000588867 GRIPAP1Q4V328 841 aa17.57■□□□□ 0.4
NPC1-207ENST00000588867 KBTBD3Q8NAB2 608 aa17.57■□□□□ 0.4
NPC1-207ENST00000588867 CD209Q9NNX6 404 aa17.57■□□□□ 0.4
NPC1-207ENST00000588867 DUOX1Q9NRD9 1551 aa17.57■□□□□ 0.4
NPC1-207ENST00000588867 CHAF1AQ13111 956 aaPredicted RBP17.57■□□□□ 0.4
NPC1-207ENST00000588867 TTF1Q15361 905 aaPredicted RBP17.57■□□□□ 0.4
NPC1-207ENST00000588867 SOGA3Q5TF21 947 aa17.57■□□□□ 0.4
NPC1-207ENST00000588867 SUPT20HQ8NEM7 779 aa17.57■□□□□ 0.4
NPC1-207ENST00000588867 DIAPH3Q9NSV4 1193 aa17.57■□□□□ 0.4
NPC1-207ENST00000588867 SEMA3EO15041 775 aa17.56■□□□□ 0.4
NPC1-207ENST00000588867 DOK7Q18PE1 504 aa17.56■□□□□ 0.4
NPC1-207ENST00000588867 RTFDC1Q9BY42 306 aaPredicted RBP17.56■□□□□ 0.4
NPC1-207ENST00000588867 JAG2Q9Y219 1238 aa17.56■□□□□ 0.4
NPC1-207ENST00000588867 BRCA1P38398 1863 aaKnown RBP17.56■□□□□ 0.4
NPC1-207ENST00000588867 SEC24BO95487 1268 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms