RNA–Protein interactions for RNA: ENST00000587560.5

H3F3B-206, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene H3F3B, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-206ENST00000587560 CHD1LQ86WJ1 897 aa22.53■■□□□ 1.2
H3F3B-206ENST00000587560 LEMD3Q9Y2U8 911 aa22.53■■□□□ 1.2
H3F3B-206ENST00000587560 SNAP23O00161 211 aa22.52■■□□□ 1.2
H3F3B-206ENST00000587560 APBB1O00213 710 aa22.52■■□□□ 1.2
H3F3B-206ENST00000587560 PUM3Q15397 648 aaKnown RBP22.52■■□□□ 1.2
H3F3B-206ENST00000587560 POLLQ9UGP5 575 aa22.52■■□□□ 1.2
H3F3B-206ENST00000587560 AKAP2Q9Y2D5 859 aa22.52■■□□□ 1.2
H3F3B-206ENST00000587560 ATP2B4P23634 1241 aa22.51■■□□□ 1.19
H3F3B-206ENST00000587560 CCDC93Q567U6 631 aa22.51■■□□□ 1.19
H3F3B-206ENST00000587560 MPNDQ8N594 471 aa22.51■■□□□ 1.19
H3F3B-206ENST00000587560 TBC1D16Q8TBP0 767 aa22.51■■□□□ 1.19
H3F3B-206ENST00000587560 LPIN2Q92539 896 aa22.51■■□□□ 1.19
H3F3B-206ENST00000587560 A0A1B0GUL7 405 aa22.5■■□□□ 1.19
H3F3B-206ENST00000587560 PDE4AP27815 886 aa22.5■■□□□ 1.19
H3F3B-206ENST00000587560 ATP2B3Q16720 1220 aa22.5■■□□□ 1.19
H3F3B-206ENST00000587560 SOGA3Q5TF21 947 aa22.5■■□□□ 1.19
H3F3B-206ENST00000587560 CLASRPQ8N2M8 674 aaKnown RBP22.5■■□□□ 1.19
H3F3B-206ENST00000587560 DBNLQ9UJU6 430 aaKnown RBP22.5■■□□□ 1.19
H3F3B-206ENST00000587560 NSFL1CQ9UNZ2 370 aaKnown RBP22.5■■□□□ 1.19
H3F3B-206ENST00000587560 ZNF804BA4D1E1 1349 aa22.5■■□□□ 1.19
H3F3B-206ENST00000587560 ZBTB22O15209 634 aa22.49■■□□□ 1.19
H3F3B-206ENST00000587560 TIMM10P62072 90 aa22.49■■□□□ 1.19
H3F3B-206ENST00000587560 FSTL1Q12841 308 aa22.49■■□□□ 1.19
H3F3B-206ENST00000587560 C16orf71Q8IYS4 520 aaPredicted RBP22.49■■□□□ 1.19
H3F3B-206ENST00000587560 RTKN2Q8IZC4 609 aa22.49■■□□□ 1.19
H3F3B-206ENST00000587560 PSMD1Q99460 953 aa22.49■■□□□ 1.19
H3F3B-206ENST00000587560 LNPKQ9C0E8 428 aa22.49■■□□□ 1.19
H3F3B-206ENST00000587560 BCS1LQ9Y276 419 aa22.49■■□□□ 1.19
H3F3B-206ENST00000587560 OTUD7AQ8TE49 926 aaPredicted RBP22.48■■□□□ 1.19
H3F3B-206ENST00000587560 TLR7Q9NYK1 1049 aaKnown RBP22.48■■□□□ 1.19
H3F3B-206ENST00000587560 ANKIB1Q9P2G1 1089 aa22.48■■□□□ 1.19
H3F3B-206ENST00000587560 GGA1Q9UJY5 639 aa22.48■■□□□ 1.19
H3F3B-206ENST00000587560 MED23Q9ULK4 1368 aa22.48■■□□□ 1.19
H3F3B-206ENST00000587560 KLRK1P26718 216 aa22.47■■□□□ 1.19
H3F3B-206ENST00000587560 DPP8Q6V1X1 898 aaPredicted RBP22.47■■□□□ 1.19
H3F3B-206ENST00000587560 AACSQ86V21 672 aa22.47■■□□□ 1.19
H3F3B-206ENST00000587560 DBNDD2Q9BQY9 259 aa22.47■■□□□ 1.19
H3F3B-206ENST00000587560 ZNF219Q9P2Y4 722 aaPredicted RBP22.47■■□□□ 1.19
H3F3B-206ENST00000587560 LTBP3Q9NS15 1303 aa22.47■■□□□ 1.19
H3F3B-206ENST00000587560 NFKBIEO00221 500 aa22.46■■□□□ 1.19
H3F3B-206ENST00000587560 UFL1O94874 794 aa22.46■■□□□ 1.19
H3F3B-206ENST00000587560 ADORA1P30542 326 aa22.46■■□□□ 1.19
H3F3B-206ENST00000587560 TXNRD3Q86VQ6 643 aa22.46■■□□□ 1.19
H3F3B-206ENST00000587560 XAGE2Q96GT9 111 aa22.46■■□□□ 1.19
H3F3B-206ENST00000587560 CCDC8Q9H0W5 538 aaPredicted RBP22.46■■□□□ 1.19
H3F3B-206ENST00000587560 AKAP11Q9UKA4 1901 aa22.46■■□□□ 1.19
H3F3B-206ENST00000587560 SLC5A1P13866 664 aa22.45■■□□□ 1.18
H3F3B-206ENST00000587560 FBXO33Q7Z6M2 555 aa22.45■■□□□ 1.18
H3F3B-206ENST00000587560 TMX4Q9H1E5 349 aaPredicted RBP22.45■■□□□ 1.18
H3F3B-206ENST00000587560 STAP2Q9UGK3 403 aa22.45■■□□□ 1.18
H3F3B-206ENST00000587560 SBF1O95248 1867 aa22.45■■□□□ 1.18
H3F3B-206ENST00000587560 IFIT1P09914 478 aaKnown RBP22.44■■□□□ 1.18
H3F3B-206ENST00000587560 FKBP4Q02790 459 aaKnown RBP eCLIP22.44■■□□□ 1.18
H3F3B-206ENST00000587560 PLEKHM2Q8IWE5 1019 aa22.44■■□□□ 1.18
H3F3B-206ENST00000587560 FAM84BQ96KN1 310 aaPredicted RBP22.44■■□□□ 1.18
H3F3B-206ENST00000587560 OSBPL3Q9H4L5 887 aa22.44■■□□□ 1.18
H3F3B-206ENST00000587560 ZNF646O15015 1829 aaPredicted RBP22.43■■□□□ 1.18
H3F3B-206ENST00000587560 COL4A5P29400 1685 aa22.43■■□□□ 1.18
H3F3B-206ENST00000587560 SUPT20HQ8NEM7 779 aa22.43■■□□□ 1.18
H3F3B-206ENST00000587560 ZNF512BQ96KM6 892 aaPredicted RBP22.43■■□□□ 1.18
H3F3B-206ENST00000587560 GPR101Q96P66 508 aaPredicted RBP22.43■■□□□ 1.18
H3F3B-206ENST00000587560 VPS33BQ9H267 617 aa22.43■■□□□ 1.18
H3F3B-206ENST00000587560 DICER1Q9UPY3 1922 aaKnown RBP22.43■■□□□ 1.18
H3F3B-206ENST00000587560 CCDC88AQ3V6T2 1871 aa22.43■■□□□ 1.18
H3F3B-206ENST00000587560 IFIT2P09913 472 aaKnown RBP22.42■■□□□ 1.18
H3F3B-206ENST00000587560 SKAP1Q86WV1 359 aa22.42■■□□□ 1.18
H3F3B-206ENST00000587560 NEUROD6Q96NK8 337 aa22.42■■□□□ 1.18
H3F3B-206ENST00000587560 C6orf229H3BNL8 230 aa22.41■■□□□ 1.18
H3F3B-206ENST00000587560 KCNJ4P48050 445 aa22.41■■□□□ 1.18
H3F3B-206ENST00000587560 PDE1AP54750 535 aa22.41■■□□□ 1.18
H3F3B-206ENST00000587560 KIAA2012Q0VF49 1180 aa22.41■■□□□ 1.18
H3F3B-206ENST00000587560 MYH13Q9UKX3 1938 aa22.41■■□□□ 1.18
H3F3B-206ENST00000587560 PSME4Q14997 1843 aa22.41■■□□□ 1.18
H3F3B-206ENST00000587560 AOX1Q06278 1338 aa22.4■■□□□ 1.18
H3F3B-206ENST00000587560 TTC41PQ6P2S7 1318 aa22.4■■□□□ 1.18
H3F3B-206ENST00000587560 MX1P20591 662 aa22.4■■□□□ 1.18
H3F3B-206ENST00000587560 ARID4AP29374 1257 aaPredicted RBP22.4■■□□□ 1.18
H3F3B-206ENST00000587560 PHKA1P46020 1223 aa22.4■■□□□ 1.18
H3F3B-206ENST00000587560 BCAMP50895 628 aa22.4■■□□□ 1.18
H3F3B-206ENST00000587560 CCDC102BQ68D86 513 aa22.4■■□□□ 1.18
H3F3B-206ENST00000587560 PI4K2BQ8TCG2 481 aa22.4■■□□□ 1.18
H3F3B-206ENST00000587560 EYA3Q99504 573 aa22.4■■□□□ 1.18
H3F3B-206ENST00000587560 ZBTB47Q9UFB7 747 aaPredicted RBP22.4■■□□□ 1.18
H3F3B-206ENST00000587560 SCN9AQ15858 1988 aa22.39■■□□□ 1.18
H3F3B-206ENST00000587560 GYG1P46976 350 aa22.39■■□□□ 1.17
H3F3B-206ENST00000587560 WASHC4Q2M389 1173 aa22.39■■□□□ 1.17
H3F3B-206ENST00000587560 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.39■■□□□ 1.17
H3F3B-206ENST00000587560 TAOK3Q9H2K8 898 aa22.39■■□□□ 1.17
H3F3B-206ENST00000587560 IL1R1P14778 569 aa22.38■■□□□ 1.17
H3F3B-206ENST00000587560 ATP5JP18859 108 aa22.38■■□□□ 1.17
H3F3B-206ENST00000587560 HIBADHP31937 336 aaKnown RBP22.38■■□□□ 1.17
H3F3B-206ENST00000587560 TDRD7Q8NHU6 1098 aaKnown RBP22.38■■□□□ 1.17
H3F3B-206ENST00000587560 ECHDC1Q9NTX5 307 aa22.38■■□□□ 1.17
H3F3B-206ENST00000587560 COL1A1P02452 1464 aaPredicted RBP22.38■■□□□ 1.17
H3F3B-206ENST00000587560 CD209Q9NNX6 404 aa22.37■■□□□ 1.17
H3F3B-206ENST00000587560 SCARF1Q14162 830 aa22.36■■□□□ 1.17
H3F3B-206ENST00000587560 CAVIN4Q5BKX8 364 aa22.36■■□□□ 1.17
H3F3B-206ENST00000587560 ZC3H12CQ9C0D7 883 aaKnown RBP22.36■■□□□ 1.17
H3F3B-206ENST00000587560 COA1Q9GZY4 146 aa22.36■■□□□ 1.17
H3F3B-206ENST00000587560 ZNF277Q9NRM2 450 aaPredicted RBP22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms