RNA–Protein interactions for RNA: ENST00000585409.2

LSM7-203, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM7, Length 512 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-203ENST00000585409 TNRC18O15417 2968 aaPredicted RBP29.34■■■□□ 2.29
LSM7-203ENST00000585409 SSH1Q8WYL5 1049 aa29.34■■■□□ 2.29
LSM7-203ENST00000585409 GMLQ99445 158 aa29.34■■■□□ 2.29
LSM7-203ENST00000585409 RNF186Q9NXI6 227 aa29.34■■■□□ 2.29
LSM7-203ENST00000585409 PI4KAP2A4QPH2 592 aa29.33■■■□□ 2.29
LSM7-203ENST00000585409 G3V3G9 751 aa29.33■■■□□ 2.29
LSM7-203ENST00000585409 DCAF8Q5TAQ9 597 aa29.33■■■□□ 2.29
LSM7-203ENST00000585409 G2E3Q7L622 706 aa29.33■■■□□ 2.29
LSM7-203ENST00000585409 PI4KAP1Q8N8J0 262 aa29.33■■■□□ 2.29
LSM7-203ENST00000585409 YTHDC1Q96MU7 727 aaKnown RBP29.33■■■□□ 2.29
LSM7-203ENST00000585409 METTL22Q9BUU2 404 aaPredicted RBP29.33■■■□□ 2.29
LSM7-203ENST00000585409 MAP3K2Q9Y2U5 619 aa29.33■■■□□ 2.29
LSM7-203ENST00000585409 PAPPA2Q9BXP8 1791 aa29.33■■■□□ 2.29
LSM7-203ENST00000585409 MYH3P11055 1940 aa29.32■■■□□ 2.28
LSM7-203ENST00000585409 ZNF646O15015 1829 aaPredicted RBP29.32■■■□□ 2.28
LSM7-203ENST00000585409 PTPRCP08575 1304 aa29.32■■■□□ 2.28
LSM7-203ENST00000585409 XDHP47989 1333 aa29.32■■■□□ 2.28
LSM7-203ENST00000585409 SCARF1Q14162 830 aa29.32■■■□□ 2.28
LSM7-203ENST00000585409 MRPL50Q8N5N7 158 aaKnown RBP29.32■■■□□ 2.28
LSM7-203ENST00000585409 CSRNP1Q96S65 589 aa29.32■■■□□ 2.28
LSM7-203ENST00000585409 CWC25Q9NXE8 425 aaPredicted RBP29.32■■■□□ 2.28
LSM7-203ENST00000585409 ANGEL2Q5VTE6 544 aaKnown RBP29.31■■■□□ 2.28
LSM7-203ENST00000585409 TRPA1O75762 1119 aa29.3■■■□□ 2.28
LSM7-203ENST00000585409 SPEF2Q9C093 1822 aa29.29■■■□□ 2.28
LSM7-203ENST00000585409 PITPNM2Q9BZ72 1349 aa29.29■■■□□ 2.28
LSM7-203ENST00000585409 ANKRD18AQ8IVF6 992 aa29.29■■■□□ 2.28
LSM7-203ENST00000585409 DNAAF4Q8WXU2 420 aa29.29■■■□□ 2.28
LSM7-203ENST00000585409 JARID2Q92833 1246 aaPredicted RBP29.29■■■□□ 2.28
LSM7-203ENST00000585409 KIF16BQ96L93 1317 aa29.28■■■□□ 2.28
LSM7-203ENST00000585409 ATP2B4P23634 1241 aa29.28■■■□□ 2.28
LSM7-203ENST00000585409 RARSP54136 660 aaKnown RBP29.28■■■□□ 2.28
LSM7-203ENST00000585409 FKBP1BP68106 108 aa29.28■■■□□ 2.28
LSM7-203ENST00000585409 RASAL3Q86YV0 1011 aa29.28■■■□□ 2.28
LSM7-203ENST00000585409 CCDC85AQ96PX6 553 aaPredicted RBP29.28■■■□□ 2.28
LSM7-203ENST00000585409 MYOZ2Q9NPC6 264 aa29.28■■■□□ 2.28
LSM7-203ENST00000585409 USP17L8P0C7I0 530 aa29.27■■■□□ 2.28
LSM7-203ENST00000585409 PODNQ7Z5L7 613 aa29.27■■■□□ 2.28
LSM7-203ENST00000585409 REM2Q8IYK8 340 aaPredicted RBP29.27■■■□□ 2.28
LSM7-203ENST00000585409 USP17L3A6NCW0 530 aa29.26■■■□□ 2.27
LSM7-203ENST00000585409 USP17L4A6NCW7 530 aa29.26■■■□□ 2.27
LSM7-203ENST00000585409 USP17L1Q7RTZ2 530 aa29.26■■■□□ 2.27
LSM7-203ENST00000585409 CTSWP56202 376 aa29.24■■■□□ 2.27
LSM7-203ENST00000585409 PDE4DIPQ5VU43 2346 aa29.24■■■□□ 2.27
LSM7-203ENST00000585409 MED23Q9ULK4 1368 aa29.24■■■□□ 2.27
LSM7-203ENST00000585409 WTIPA6NIX2 430 aaPredicted RBP29.23■■■□□ 2.27
LSM7-203ENST00000585409 IPO8O15397 1037 aaKnown RBP29.23■■■□□ 2.27
LSM7-203ENST00000585409 LINS1Q8NG48 757 aa29.23■■■□□ 2.27
LSM7-203ENST00000585409 CDC5LQ99459 802 aaKnown RBP29.23■■■□□ 2.27
LSM7-203ENST00000585409 API5Q9BZZ5 524 aaKnown RBP29.23■■■□□ 2.27
LSM7-203ENST00000585409 IGKV5-2P06315 115 aa29.21■■■□□ 2.27
LSM7-203ENST00000585409 TTLL11Q8NHH1 800 aa29.21■■■□□ 2.27
LSM7-203ENST00000585409 BSDC1Q9NW68 430 aaPredicted RBP29.21■■■□□ 2.27
LSM7-203ENST00000585409 CTU1Q7Z7A3 348 aaKnown RBP29.2■■■□□ 2.26
LSM7-203ENST00000585409 MINPP1Q9UNW1 487 aa29.2■■■□□ 2.26
LSM7-203ENST00000585409 DACT2Q5SW24 774 aa29.19■■■□□ 2.26
LSM7-203ENST00000585409 MOB2Q70IA6 237 aa29.19■■■□□ 2.26
LSM7-203ENST00000585409 ARHGAP45Q92619 1136 aa29.19■■■□□ 2.26
LSM7-203ENST00000585409 GREM2Q9H772 168 aa29.19■■■□□ 2.26
LSM7-203ENST00000585409 SCAF8Q9UPN6 1271 aaKnown RBP29.19■■■□□ 2.26
LSM7-203ENST00000585409 NEURL1BA8MQ27 555 aa29.18■■■□□ 2.26
LSM7-203ENST00000585409 F6X3S4 739 aa29.18■■■□□ 2.26
LSM7-203ENST00000585409 NBPF9Q3BBW0 867 aa29.18■■■□□ 2.26
LSM7-203ENST00000585409 SLC4A10Q6U841 1118 aa29.18■■■□□ 2.26
LSM7-203ENST00000585409 NOB1Q9ULX3 412 aaKnown RBP29.18■■■□□ 2.26
LSM7-203ENST00000585409 SRCIN1Q9C0H9 1055 aa29.17■■■□□ 2.26
LSM7-203ENST00000585409 ALDH1L1O75891 902 aa29.16■■■□□ 2.26
LSM7-203ENST00000585409 CCT4P50991 539 aaKnown RBP29.16■■■□□ 2.26
LSM7-203ENST00000585409 SOX10P56693 466 aa29.16■■■□□ 2.26
LSM7-203ENST00000585409 MYO3BQ8WXR4 1341 aa29.16■■■□□ 2.26
LSM7-203ENST00000585409 UBE2Q2LH0YL09 131 aa29.15■■■□□ 2.26
LSM7-203ENST00000585409 BEND3Q5T5X7 828 aa29.15■■■□□ 2.26
LSM7-203ENST00000585409 STRIP1Q5VSL9 837 aa29.15■■■□□ 2.26
LSM7-203ENST00000585409 PRAMEF18Q5VWM3 479 aa29.15■■■□□ 2.26
LSM7-203ENST00000585409 MXD3Q9BW11 206 aa29.15■■■□□ 2.26
LSM7-203ENST00000585409 PCDH10Q9P2E7 1040 aa29.15■■■□□ 2.26
LSM7-203ENST00000585409 WNT10BO00744 389 aa29.14■■■□□ 2.26
LSM7-203ENST00000585409 CWF19L2Q2TBE0 894 aaKnown RBP29.14■■■□□ 2.26
LSM7-203ENST00000585409 COA1Q9GZY4 146 aa29.14■■■□□ 2.26
LSM7-203ENST00000585409 GCKRQ14397 625 aa29.13■■■□□ 2.25
LSM7-203ENST00000585409 TXNRD3Q86VQ6 643 aa29.13■■■□□ 2.25
LSM7-203ENST00000585409 OGFOD1Q8N543 542 aa29.13■■■□□ 2.25
LSM7-203ENST00000585409 FRAT1Q92837 279 aaPredicted RBP29.13■■■□□ 2.25
LSM7-203ENST00000585409 BCAR3O75815 825 aa29.12■■■□□ 2.25
LSM7-203ENST00000585409 MMP14P50281 582 aa29.12■■■□□ 2.25
LSM7-203ENST00000585409 LEMD3Q9Y2U8 911 aa29.12■■■□□ 2.25
LSM7-203ENST00000585409 H7C1W4 665 aa29.11■■■□□ 2.25
LSM7-203ENST00000585409 TM4SF4P48230 202 aa29.11■■■□□ 2.25
LSM7-203ENST00000585409 ZKSCAN2Q63HK3 967 aa29.11■■■□□ 2.25
LSM7-203ENST00000585409 RCAN3Q9UKA8 241 aa29.11■■■□□ 2.25
LSM7-203ENST00000585409 C9orf78Q9NZ63 289 aaPredicted RBP29.1■■■□□ 2.25
LSM7-203ENST00000585409 TBC1D8O95759 1140 aa29.09■■■□□ 2.25
LSM7-203ENST00000585409 PKN2Q16513 984 aaKnown RBP29.09■■■□□ 2.25
LSM7-203ENST00000585409 ATF7IPQ6VMQ6 1270 aa29.09■■■□□ 2.25
LSM7-203ENST00000585409 ZNF296Q8WUU4 475 aaPredicted RBP29.09■■■□□ 2.25
LSM7-203ENST00000585409 PLA2G12BQ9BX93 195 aa29.09■■■□□ 2.25
LSM7-203ENST00000585409 HPS5Q9UPZ3 1129 aa29.09■■■□□ 2.25
LSM7-203ENST00000585409 NF2P35240 595 aa29.08■■■□□ 2.25
LSM7-203ENST00000585409 NOM1Q5C9Z4 860 aaKnown RBP29.08■■■□□ 2.25
LSM7-203ENST00000585409 UBE3BQ7Z3V4 1068 aa29.08■■■□□ 2.25
LSM7-203ENST00000585409 FBXW7Q969H0 707 aa29.08■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms