RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 RANBP6O60518 1105 aaKnown RBP13.24□□□□□ -0.29
TOP3A-217ENST00000584582 FSIP1Q8NA03 581 aa13.24□□□□□ -0.29
TOP3A-217ENST00000584582 OSBP2Q969R2 916 aa13.24□□□□□ -0.29
TOP3A-217ENST00000584582 HAUS7Q99871 368 aa13.24□□□□□ -0.29
TOP3A-217ENST00000584582 CARD10Q9BWT7 1032 aa13.24□□□□□ -0.29
TOP3A-217ENST00000584582 TEX13AQ9BXU3 409 aaPredicted RBP13.24□□□□□ -0.29
TOP3A-217ENST00000584582 CFAP45Q9UL16 551 aa13.24□□□□□ -0.29
TOP3A-217ENST00000584582 E7EWF7 191 aa13.24□□□□□ -0.29
TOP3A-217ENST00000584582 PHKA1P46020 1223 aa13.24□□□□□ -0.29
TOP3A-217ENST00000584582 CMTR1Q8N1G2 835 aaKnown RBP13.24□□□□□ -0.29
TOP3A-217ENST00000584582 CCAR1Q8IX12 1150 aaKnown RBP13.24□□□□□ -0.29
TOP3A-217ENST00000584582 ARHGAP23Q9P227 1491 aa13.23□□□□□ -0.29
TOP3A-217ENST00000584582 PRDM1O75626 825 aa13.23□□□□□ -0.29
TOP3A-217ENST00000584582 MAP3K12Q12852 859 aa13.23□□□□□ -0.29
TOP3A-217ENST00000584582 ANO6Q4KMQ2 910 aa13.23□□□□□ -0.29
TOP3A-217ENST00000584582 ARMT1Q9H993 441 aa13.23□□□□□ -0.29
TOP3A-217ENST00000584582 MEGF6O75095 1541 aa13.23□□□□□ -0.29
TOP3A-217ENST00000584582 hCG_1642624A0A1W2PR95 340 aa13.23□□□□□ -0.29
TOP3A-217ENST00000584582 DHX16O60231 1041 aaKnown RBP13.23□□□□□ -0.29
TOP3A-217ENST00000584582 SLC5A1P13866 664 aa13.23□□□□□ -0.29
TOP3A-217ENST00000584582 ZNF445P59923 1031 aa13.23□□□□□ -0.29
TOP3A-217ENST00000584582 TMEM67Q5HYA8 995 aa13.23□□□□□ -0.29
TOP3A-217ENST00000584582 PHKBQ93100 1093 aa13.23□□□□□ -0.29
TOP3A-217ENST00000584582 SMC2O95347 1197 aa13.23□□□□□ -0.29
TOP3A-217ENST00000584582 PDILTQ8N807 584 aa13.23□□□□□ -0.29
TOP3A-217ENST00000584582 NCOA7Q8NI08 942 aa13.23□□□□□ -0.29
TOP3A-217ENST00000584582 ZNF396Q96N95 335 aaPredicted RBP13.23□□□□□ -0.29
TOP3A-217ENST00000584582 M0R2C6 588 aa13.22□□□□□ -0.29
TOP3A-217ENST00000584582 MBD4O95243 580 aa13.22□□□□□ -0.29
TOP3A-217ENST00000584582 FGAP02671 866 aa13.22□□□□□ -0.29
TOP3A-217ENST00000584582 MCM5P33992 734 aa13.22□□□□□ -0.29
TOP3A-217ENST00000584582 ZNF165P49910 485 aa13.22□□□□□ -0.29
TOP3A-217ENST00000584582 TTC14Q96N46 770 aa13.22□□□□□ -0.29
TOP3A-217ENST00000584582 PUS7LQ9H0K6 701 aaKnown RBP13.22□□□□□ -0.29
TOP3A-217ENST00000584582 PES1O00541 588 aaKnown RBP13.22□□□□□ -0.29
TOP3A-217ENST00000584582 CTDSPL2Q05D32 466 aa13.22□□□□□ -0.29
TOP3A-217ENST00000584582 UBAC1Q9BSL1 405 aa13.22□□□□□ -0.29
TOP3A-217ENST00000584582 SLC26A6Q9BXS9 759 aa13.22□□□□□ -0.29
TOP3A-217ENST00000584582 ATG3Q9NT62 314 aa13.22□□□□□ -0.29
TOP3A-217ENST00000584582 A0A1B0GVL5 298 aa13.21□□□□□ -0.29
TOP3A-217ENST00000584582 H7C1W4 665 aa13.21□□□□□ -0.29
TOP3A-217ENST00000584582 HMGB1P09429 215 aaKnown RBP13.21□□□□□ -0.29
TOP3A-217ENST00000584582 SCRN1Q12765 414 aa13.21□□□□□ -0.29
TOP3A-217ENST00000584582 ZSCAN25Q6NSZ9 544 aa13.21□□□□□ -0.29
TOP3A-217ENST00000584582 NACAP1Q9BZK3 213 aa13.21□□□□□ -0.29
TOP3A-217ENST00000584582 REREQ9P2R6 1566 aa13.21□□□□□ -0.29
TOP3A-217ENST00000584582 LETM1O95202 739 aaPredicted RBP13.21□□□□□ -0.29
TOP3A-217ENST00000584582 CYP2E1P05181 493 aaPredicted RBP13.21□□□□□ -0.29
TOP3A-217ENST00000584582 CLCN1P35523 988 aa13.21□□□□□ -0.29
TOP3A-217ENST00000584582 BCAMP50895 628 aa13.21□□□□□ -0.29
TOP3A-217ENST00000584582 FOXO4P98177 505 aa13.21□□□□□ -0.29
TOP3A-217ENST00000584582 SAFBQ15424 915 aaKnown RBP eCLIP13.21□□□□□ -0.29
TOP3A-217ENST00000584582 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.21□□□□□ -0.29
TOP3A-217ENST00000584582 FER1L4A9Z1Z3 1794 aa13.21□□□□□ -0.29
TOP3A-217ENST00000584582 MAST3O60307 1309 aa13.21□□□□□ -0.29
TOP3A-217ENST00000584582 GOLGA8AA7E2F4 631 aa13.21□□□□□ -0.3
TOP3A-217ENST00000584582 G3V3G9 751 aa13.21□□□□□ -0.3
TOP3A-217ENST00000584582 CYP7A1P22680 504 aa13.21□□□□□ -0.3
TOP3A-217ENST00000584582 METAP2P50579 478 aaKnown RBP eCLIP13.21□□□□□ -0.3
TOP3A-217ENST00000584582 DCAF8Q5TAQ9 597 aa13.21□□□□□ -0.3
TOP3A-217ENST00000584582 SAMD1Q6SPF0 538 aaPredicted RBP13.21□□□□□ -0.3
TOP3A-217ENST00000584582 SLC4A4Q9Y6R1 1079 aa13.21□□□□□ -0.3
TOP3A-217ENST00000584582 ZNF532Q9HCE3 1301 aa13.21□□□□□ -0.3
TOP3A-217ENST00000584582 SLIT1O75093 1534 aa13.21□□□□□ -0.3
TOP3A-217ENST00000584582 ADD1P35611 737 aaKnown RBP13.2□□□□□ -0.3
TOP3A-217ENST00000584582 SART3Q15020 963 aaKnown RBP13.2□□□□□ -0.3
TOP3A-217ENST00000584582 C3P01024 1663 aa13.2□□□□□ -0.3
TOP3A-217ENST00000584582 LMTK3Q96Q04 1460 aa13.2□□□□□ -0.3
TOP3A-217ENST00000584582 ANKRD26Q9UPS8 1709 aa13.2□□□□□ -0.3
TOP3A-217ENST00000584582 KCNQ2O43526 872 aa13.2□□□□□ -0.3
TOP3A-217ENST00000584582 TOB2Q14106 344 aaPredicted RBP13.2□□□□□ -0.3
TOP3A-217ENST00000584582 UTP14AQ9BVJ6 771 aaKnown RBP13.2□□□□□ -0.3
TOP3A-217ENST00000584582 SLC12A7Q9Y666 1083 aa13.2□□□□□ -0.3
TOP3A-217ENST00000584582 UBAP1LF5GYI3 381 aa13.2□□□□□ -0.3
TOP3A-217ENST00000584582 ATG9AQ7Z3C6 839 aa13.2□□□□□ -0.3
TOP3A-217ENST00000584582 ZBTB38Q8NAP3 1195 aaPredicted RBP13.2□□□□□ -0.3
TOP3A-217ENST00000584582 LEO1Q8WVC0 666 aaPredicted RBP13.2□□□□□ -0.3
TOP3A-217ENST00000584582 TM6SF1Q9BZW5 370 aa13.2□□□□□ -0.3
TOP3A-217ENST00000584582 TFCP2L1Q9NZI6 479 aa13.2□□□□□ -0.3
TOP3A-217ENST00000584582 KDM6AO15550 1401 aaPredicted RBP13.2□□□□□ -0.3
TOP3A-217ENST00000584582 NR1I2O75469 434 aa13.19□□□□□ -0.3
TOP3A-217ENST00000584582 CTSWP56202 376 aa13.19□□□□□ -0.3
TOP3A-217ENST00000584582 TYRO3Q06418 890 aa13.19□□□□□ -0.3
TOP3A-217ENST00000584582 SPECC1Q5M775 1068 aa13.19□□□□□ -0.3
TOP3A-217ENST00000584582 ANKIB1Q9P2G1 1089 aa13.19□□□□□ -0.3
TOP3A-217ENST00000584582 SH3TC1Q8TE82 1336 aa13.19□□□□□ -0.3
TOP3A-217ENST00000584582 ZPR1O75312 459 aa13.19□□□□□ -0.3
TOP3A-217ENST00000584582 HMGN5P82970 282 aaKnown RBP13.19□□□□□ -0.3
TOP3A-217ENST00000584582 GIGYF2Q6Y7W6 1299 aaKnown RBP13.19□□□□□ -0.3
TOP3A-217ENST00000584582 NLRP10Q86W26 655 aa13.19□□□□□ -0.3
TOP3A-217ENST00000584582 KIF13AQ9H1H9 1805 aa13.19□□□□□ -0.3
TOP3A-217ENST00000584582 GYG1P46976 350 aa13.19□□□□□ -0.3
TOP3A-217ENST00000584582 CCDC102BQ68D86 513 aa13.19□□□□□ -0.3
TOP3A-217ENST00000584582 STOX1Q6ZVD7 989 aa13.19□□□□□ -0.3
TOP3A-217ENST00000584582 GTF3C6Q969F1 213 aa13.19□□□□□ -0.3
TOP3A-217ENST00000584582 AIFM3Q96NN9 605 aa13.19□□□□□ -0.3
TOP3A-217ENST00000584582 ALG1Q9BT22 464 aa13.19□□□□□ -0.3
TOP3A-217ENST00000584582 ZNF219Q9P2Y4 722 aaPredicted RBP13.18□□□□□ -0.3
TOP3A-217ENST00000584582 TNS3Q68CZ2 1445 aa13.18□□□□□ -0.3
TOP3A-217ENST00000584582 IARSP41252 1262 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms