RNA–Protein interactions for RNA: ENST00000584025.1

ITGB4-210, Transcript of integrin subunit beta 4, humanhuman

TSL 5

Gene ITGB4, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-210ENST00000584025 KCNQ5Q9NR82 932 aa19.16■□□□□ 0.66
ITGB4-210ENST00000584025 FBXO3Q9UK99 471 aa19.16■□□□□ 0.66
ITGB4-210ENST00000584025 PNMA6EA0A0J9YXQ4 647 aa19.15■□□□□ 0.66
ITGB4-210ENST00000584025 PSMD14O00487 310 aa19.15■□□□□ 0.66
ITGB4-210ENST00000584025 CIAO1O76071 339 aa19.15■□□□□ 0.66
ITGB4-210ENST00000584025 COA1Q9GZY4 146 aa19.15■□□□□ 0.66
ITGB4-210ENST00000584025 COPRSQ9NQ92 184 aa19.15■□□□□ 0.66
ITGB4-210ENST00000584025 HACL1Q9UJ83 578 aa19.15■□□□□ 0.66
ITGB4-210ENST00000584025 PDE8BO95263 885 aa19.14■□□□□ 0.65
ITGB4-210ENST00000584025 GMPSP49915 693 aaPredicted RBP19.14■□□□□ 0.65
ITGB4-210ENST00000584025 ATP8B2P98198 1209 aa19.14■□□□□ 0.65
ITGB4-210ENST00000584025 C15orf52Q6ZUT6 534 aaKnown RBP19.14■□□□□ 0.65
ITGB4-210ENST00000584025 ATG9AQ7Z3C6 839 aa19.14■□□□□ 0.65
ITGB4-210ENST00000584025 ZNF804AQ7Z570 1209 aa19.14■□□□□ 0.65
ITGB4-210ENST00000584025 PODNQ7Z5L7 613 aa19.14■□□□□ 0.65
ITGB4-210ENST00000584025 CHMP4BQ9H444 224 aaKnown RBP19.14■□□□□ 0.65
ITGB4-210ENST00000584025 IL15P40933 162 aaPredicted RBP19.13■□□□□ 0.65
ITGB4-210ENST00000584025 RRP1P56182 461 aaKnown RBP19.13■□□□□ 0.65
ITGB4-210ENST00000584025 VGLL2Q8N8G2 317 aa19.13■□□□□ 0.65
ITGB4-210ENST00000584025 FBXW7Q969H0 707 aa19.13■□□□□ 0.65
ITGB4-210ENST00000584025 CEP126Q9P2H0 1117 aa19.13■□□□□ 0.65
ITGB4-210ENST00000584025 ARAP2Q8WZ64 1704 aa19.13■□□□□ 0.65
ITGB4-210ENST00000584025 IRS2Q9Y4H2 1338 aa19.12■□□□□ 0.65
ITGB4-210ENST00000584025 TOMM70O94826 608 aa19.12■□□□□ 0.65
ITGB4-210ENST00000584025 EPHX2P34913 555 aa19.12■□□□□ 0.65
ITGB4-210ENST00000584025 TAF1DQ9H5J8 278 aaPredicted RBP19.12■□□□□ 0.65
ITGB4-210ENST00000584025 ZBTB12Q9Y330 459 aaPredicted RBP19.12■□□□□ 0.65
ITGB4-210ENST00000584025 USP17L3A6NCW0 530 aa19.11■□□□□ 0.65
ITGB4-210ENST00000584025 USP17L4A6NCW7 530 aa19.11■□□□□ 0.65
ITGB4-210ENST00000584025 EPS15P42566 896 aa19.11■□□□□ 0.65
ITGB4-210ENST00000584025 SCNN1DP51172 638 aa19.11■□□□□ 0.65
ITGB4-210ENST00000584025 PUM3Q15397 648 aaKnown RBP19.11■□□□□ 0.65
ITGB4-210ENST00000584025 EAPPQ56P03 285 aaPredicted RBP19.11■□□□□ 0.65
ITGB4-210ENST00000584025 USP17L1Q7RTZ2 530 aa19.11■□□□□ 0.65
ITGB4-210ENST00000584025 CD209Q9NNX6 404 aa19.11■□□□□ 0.65
ITGB4-210ENST00000584025 GPRC5DQ9NZD1 345 aa19.11■□□□□ 0.65
ITGB4-210ENST00000584025 VIL1P09327 827 aaKnown RBP19.1■□□□□ 0.65
ITGB4-210ENST00000584025 IFIT1P09914 478 aaKnown RBP19.1■□□□□ 0.65
ITGB4-210ENST00000584025 SLC5A1P13866 664 aa19.1■□□□□ 0.65
ITGB4-210ENST00000584025 GYG1P46976 350 aa19.1■□□□□ 0.65
ITGB4-210ENST00000584025 G3BP1Q13283 466 aaKnown RBP eCLIP19.1■□□□□ 0.65
ITGB4-210ENST00000584025 POLA2Q14181 598 aa19.1■□□□□ 0.65
ITGB4-210ENST00000584025 CEP85Q6P2H3 762 aa19.1■□□□□ 0.65
ITGB4-210ENST00000584025 RBM46Q8TBY0 533 aaKnown RBP19.1■□□□□ 0.65
ITGB4-210ENST00000584025 SSH3Q8TE77 659 aa19.1■□□□□ 0.65
ITGB4-210ENST00000584025 ZBTB40Q9NUA8 1239 aa19.1■□□□□ 0.65
ITGB4-210ENST00000584025 RPS12P25398 132 aaKnown RBP19.09■□□□□ 0.65
ITGB4-210ENST00000584025 HIBADHP31937 336 aaKnown RBP19.09■□□□□ 0.65
ITGB4-210ENST00000584025 C1QTNF8P60827 252 aa19.09■□□□□ 0.65
ITGB4-210ENST00000584025 VPS37DQ86XT2 251 aa19.09■□□□□ 0.65
ITGB4-210ENST00000584025 CNOT7Q9UIV1 285 aaKnown RBP19.09■□□□□ 0.65
ITGB4-210ENST00000584025 ADAMTSL1Q8N6G6 1762 aa19.09■□□□□ 0.65
ITGB4-210ENST00000584025 IL1R1P14778 569 aa19.08■□□□□ 0.64
ITGB4-210ENST00000584025 FGFR2P21802 821 aa19.08■□□□□ 0.64
ITGB4-210ENST00000584025 GTF2IP78347 998 aa19.08■□□□□ 0.64
ITGB4-210ENST00000584025 OS9Q13438 667 aaPredicted RBP19.08■□□□□ 0.64
ITGB4-210ENST00000584025 ATP2B3Q16720 1220 aa19.08■□□□□ 0.64
ITGB4-210ENST00000584025 CAVIN4Q5BKX8 364 aa19.08■□□□□ 0.64
ITGB4-210ENST00000584025 TTLL5Q6EMB2 1281 aa19.08■□□□□ 0.64
ITGB4-210ENST00000584025 RSBN1LQ6PCB5 846 aaPredicted RBP19.08■□□□□ 0.64
ITGB4-210ENST00000584025 LPIN2Q92539 896 aa19.08■□□□□ 0.64
ITGB4-210ENST00000584025 DPF2Q92785 391 aa19.08■□□□□ 0.64
ITGB4-210ENST00000584025 FAM84BQ96KN1 310 aaPredicted RBP19.08■□□□□ 0.64
ITGB4-210ENST00000584025 H7C1D1 291 aa19.07■□□□□ 0.64
ITGB4-210ENST00000584025 SURF6O75683 361 aaKnown RBP19.07■□□□□ 0.64
ITGB4-210ENST00000584025 TFCP2Q12800 502 aa19.07■□□□□ 0.64
ITGB4-210ENST00000584025 STRIP1Q5VSL9 837 aa19.07■□□□□ 0.64
ITGB4-210ENST00000584025 PNMA8AQ86V59 439 aaPredicted RBP19.07■□□□□ 0.64
ITGB4-210ENST00000584025 MICALL2Q8IY33 904 aa19.07■□□□□ 0.64
ITGB4-210ENST00000584025 SMC1BQ8NDV3 1235 aa19.07■□□□□ 0.64
ITGB4-210ENST00000584025 ADARB2Q9NS39 739 aaKnown RBP19.07■□□□□ 0.64
ITGB4-210ENST00000584025 CLEC11AQ9Y240 323 aa19.07■□□□□ 0.64
ITGB4-210ENST00000584025 SHTN1A0MZ66 631 aa19.06■□□□□ 0.64
ITGB4-210ENST00000584025 POTEIP0CG38 1075 aa19.06■□□□□ 0.64
ITGB4-210ENST00000584025 POTEJP0CG39 1038 aa19.06■□□□□ 0.64
ITGB4-210ENST00000584025 DACT2Q5SW24 774 aa19.06■□□□□ 0.64
ITGB4-210ENST00000584025 AGBL3Q8NEM8 1001 aa19.06■□□□□ 0.64
ITGB4-210ENST00000584025 MXD3Q9BW11 206 aa19.06■□□□□ 0.64
ITGB4-210ENST00000584025 TRPM7Q96QT4 1865 aa19.05■□□□□ 0.64
ITGB4-210ENST00000584025 FRAT2O75474 233 aaPredicted RBP19.05■□□□□ 0.64
ITGB4-210ENST00000584025 BCAMP50895 628 aa19.05■□□□□ 0.64
ITGB4-210ENST00000584025 FBXO33Q7Z6M2 555 aa19.05■□□□□ 0.64
ITGB4-210ENST00000584025 LDHDQ86WU2 507 aa19.05■□□□□ 0.64
ITGB4-210ENST00000584025 RPAP2Q8IXW5 612 aaPredicted RBP19.05■□□□□ 0.64
ITGB4-210ENST00000584025 TDRD7Q8NHU6 1098 aaKnown RBP19.05■□□□□ 0.64
ITGB4-210ENST00000584025 AKAP2Q9Y2D5 859 aa19.05■□□□□ 0.64
ITGB4-210ENST00000584025 ZNF609O15014 1411 aa19.05■□□□□ 0.64
ITGB4-210ENST00000584025 ECM29Q5VYK3 1845 aa19.04■□□□□ 0.64
ITGB4-210ENST00000584025 MYO3BQ8WXR4 1341 aa19.04■□□□□ 0.64
ITGB4-210ENST00000584025 HMMRO75330 724 aa19.04■□□□□ 0.64
ITGB4-210ENST00000584025 FSTL1Q12841 308 aa19.04■□□□□ 0.64
ITGB4-210ENST00000584025 CHADLQ6NUI6 762 aa19.04■□□□□ 0.64
ITGB4-210ENST00000584025 USP50Q70EL3 339 aaPredicted RBP19.04■□□□□ 0.64
ITGB4-210ENST00000584025 IQSEC3Q9UPP2 1182 aaPredicted RBP19.04■□□□□ 0.64
ITGB4-210ENST00000584025 JAG2Q9Y219 1238 aa19.04■□□□□ 0.64
ITGB4-210ENST00000584025 RBM26Q5T8P6 1007 aaKnown RBP19.03■□□□□ 0.64
ITGB4-210ENST00000584025 GMLQ99445 158 aa19.03■□□□□ 0.64
ITGB4-210ENST00000584025 NOP58Q9Y2X3 529 aaKnown RBP19.03■□□□□ 0.64
ITGB4-210ENST00000584025 A0A1B0GUL7 405 aa19.02■□□□□ 0.64
ITGB4-210ENST00000584025 SASH1O94885 1247 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms