RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 JMYQ8N9B5 988 aa20.07■□□□□ 0.8
CDK5RAP3-228ENST00000583363 LPIN2Q92539 896 aa20.07■□□□□ 0.8
CDK5RAP3-228ENST00000583363 NEUROD6Q96NK8 337 aa20.07■□□□□ 0.8
CDK5RAP3-228ENST00000583363 PODXL2Q9NZ53 605 aa20.07■□□□□ 0.8
CDK5RAP3-228ENST00000583363 LEMD3Q9Y2U8 911 aa20.07■□□□□ 0.8
CDK5RAP3-228ENST00000583363 ZC3H4Q9UPT8 1303 aaKnown RBP20.06■□□□□ 0.8
CDK5RAP3-228ENST00000583363 LMNB1P20700 586 aa20.06■□□□□ 0.8
CDK5RAP3-228ENST00000583363 RGS3P49796 1198 aa20.06■□□□□ 0.8
CDK5RAP3-228ENST00000583363 TIAM2Q8IVF5 1701 aa20.06■□□□□ 0.8
CDK5RAP3-228ENST00000583363 TMX4Q9H1E5 349 aaPredicted RBP20.06■□□□□ 0.8
CDK5RAP3-228ENST00000583363 ANKIB1Q9P2G1 1089 aa20.06■□□□□ 0.8
CDK5RAP3-228ENST00000583363 STAP2Q9UGK3 403 aa20.06■□□□□ 0.8
CDK5RAP3-228ENST00000583363 NSFL1CQ9UNZ2 370 aaKnown RBP20.06■□□□□ 0.8
CDK5RAP3-228ENST00000583363 SLX4Q8IY92 1834 aa20.06■□□□□ 0.8
CDK5RAP3-228ENST00000583363 XDHP47989 1333 aa20.05■□□□□ 0.8
CDK5RAP3-228ENST00000583363 WTIPA6NIX2 430 aaPredicted RBP20.05■□□□□ 0.8
CDK5RAP3-228ENST00000583363 ATP2B4P23634 1241 aa20.05■□□□□ 0.8
CDK5RAP3-228ENST00000583363 CC2D2BQ6DHV5 1058 aa20.05■□□□□ 0.8
CDK5RAP3-228ENST00000583363 OLFM4Q6UX06 510 aa20.05■□□□□ 0.8
CDK5RAP3-228ENST00000583363 SMC1BQ8NDV3 1235 aa20.05■□□□□ 0.8
CDK5RAP3-228ENST00000583363 XAGE2Q96GT9 111 aa20.05■□□□□ 0.8
CDK5RAP3-228ENST00000583363 DBNDD2Q9BQY9 259 aa20.05■□□□□ 0.8
CDK5RAP3-228ENST00000583363 OSBPL3Q9H4L5 887 aa20.05■□□□□ 0.8
CDK5RAP3-228ENST00000583363 DBNLQ9UJU6 430 aaKnown RBP20.05■□□□□ 0.8
CDK5RAP3-228ENST00000583363 PCNTO95613 3336 aa20.04■□□□□ 0.8
CDK5RAP3-228ENST00000583363 IFIT1P09914 478 aaKnown RBP20.04■□□□□ 0.8
CDK5RAP3-228ENST00000583363 SLC5A1P13866 664 aa20.04■□□□□ 0.8
CDK5RAP3-228ENST00000583363 ADORA1P30542 326 aa20.04■□□□□ 0.8
CDK5RAP3-228ENST00000583363 PDE1AP54750 535 aa20.04■□□□□ 0.8
CDK5RAP3-228ENST00000583363 TLR7Q9NYK1 1049 aaKnown RBP20.04■□□□□ 0.8
CDK5RAP3-228ENST00000583363 ZNF804BA4D1E1 1349 aa20.03■□□□□ 0.8
CDK5RAP3-228ENST00000583363 ZNF609O15014 1411 aa20.03■□□□□ 0.8
CDK5RAP3-228ENST00000583363 GLTPD2A6NH11 291 aa20.03■□□□□ 0.8
CDK5RAP3-228ENST00000583363 NFKBIEO00221 500 aa20.03■□□□□ 0.8
CDK5RAP3-228ENST00000583363 MX1P20591 662 aa20.03■□□□□ 0.8
CDK5RAP3-228ENST00000583363 MPNDQ8N594 471 aa20.03■□□□□ 0.8
CDK5RAP3-228ENST00000583363 ZNF219Q9P2Y4 722 aaPredicted RBP20.03■□□□□ 0.8
CDK5RAP3-228ENST00000583363 GGA1Q9UJY5 639 aa20.03■□□□□ 0.8
CDK5RAP3-228ENST00000583363 C21orf2O43822 256 aa20.02■□□□□ 0.8
CDK5RAP3-228ENST00000583363 KCNJ4P48050 445 aa20.02■□□□□ 0.8
CDK5RAP3-228ENST00000583363 GRIPAP1Q4V328 841 aa20.02■□□□□ 0.8
CDK5RAP3-228ENST00000583363 TBC1D16Q8TBP0 767 aa20.02■□□□□ 0.8
CDK5RAP3-228ENST00000583363 ECHDC1Q9NTX5 307 aa20.02■□□□□ 0.8
CDK5RAP3-228ENST00000583363 POLLQ9UGP5 575 aa20.02■□□□□ 0.8
CDK5RAP3-228ENST00000583363 TTC41PQ6P2S7 1318 aa20.02■□□□□ 0.79
CDK5RAP3-228ENST00000583363 VEGFAP15692 232 aaPredicted RBP20.01■□□□□ 0.79
CDK5RAP3-228ENST00000583363 COL13A1Q5TAT6 717 aaPredicted RBP20.01■□□□□ 0.79
CDK5RAP3-228ENST00000583363 C15orf52Q6ZUT6 534 aaKnown RBP20.01■□□□□ 0.79
CDK5RAP3-228ENST00000583363 GPATCH3Q96I76 525 aa20.01■□□□□ 0.79
CDK5RAP3-228ENST00000583363 UFL1O94874 794 aa20■□□□□ 0.79
CDK5RAP3-228ENST00000583363 CCDC158Q5M9N0 1113 aa20■□□□□ 0.79
CDK5RAP3-228ENST00000583363 GORABQ5T7V8 394 aa20■□□□□ 0.79
CDK5RAP3-228ENST00000583363 DPP8Q6V1X1 898 aaPredicted RBP20■□□□□ 0.79
CDK5RAP3-228ENST00000583363 AOX1Q06278 1338 aa20■□□□□ 0.79
CDK5RAP3-228ENST00000583363 IRS2Q9Y4H2 1338 aa20■□□□□ 0.79
CDK5RAP3-228ENST00000583363 LRRC37AA6NMS7 1700 aa19.99■□□□□ 0.79
CDK5RAP3-228ENST00000583363 A0A1B0GUL6 1792 aa19.99■□□□□ 0.79
CDK5RAP3-228ENST00000583363 C6orf229H3BNL8 230 aa19.99■□□□□ 0.79
CDK5RAP3-228ENST00000583363 ATP5JP18859 108 aa19.99■□□□□ 0.79
CDK5RAP3-228ENST00000583363 TSHZ3Q63HK5 1081 aa19.99■□□□□ 0.79
CDK5RAP3-228ENST00000583363 FBXO33Q7Z6M2 555 aa19.99■□□□□ 0.79
CDK5RAP3-228ENST00000583363 PI4K2BQ8TCG2 481 aa19.99■□□□□ 0.79
CDK5RAP3-228ENST00000583363 FAM84BQ96KN1 310 aaPredicted RBP19.99■□□□□ 0.79
CDK5RAP3-228ENST00000583363 RTFDC1Q9BY42 306 aaPredicted RBP19.99■□□□□ 0.79
CDK5RAP3-228ENST00000583363 FER1L6Q2WGJ9 1857 aa19.99■□□□□ 0.79
CDK5RAP3-228ENST00000583363 DICER1Q9UPY3 1922 aaKnown RBP19.98■□□□□ 0.79
CDK5RAP3-228ENST00000583363 ERC2O15083 957 aa19.98■□□□□ 0.79
CDK5RAP3-228ENST00000583363 KLRK1P26718 216 aa19.98■□□□□ 0.79
CDK5RAP3-228ENST00000583363 BCAMP50895 628 aa19.98■□□□□ 0.79
CDK5RAP3-228ENST00000583363 CCDC93Q567U6 631 aa19.98■□□□□ 0.79
CDK5RAP3-228ENST00000583363 SOGA3Q5TF21 947 aa19.98■□□□□ 0.79
CDK5RAP3-228ENST00000583363 CCDC102BQ68D86 513 aa19.98■□□□□ 0.79
CDK5RAP3-228ENST00000583363 RTKN2Q8IZC4 609 aa19.98■□□□□ 0.79
CDK5RAP3-228ENST00000583363 ZNF512BQ96KM6 892 aaPredicted RBP19.98■□□□□ 0.79
CDK5RAP3-228ENST00000583363 CACNA1SQ13698 1873 aa19.98■□□□□ 0.79
CDK5RAP3-228ENST00000583363 SNED1Q8TER0 1413 aa19.97■□□□□ 0.79
CDK5RAP3-228ENST00000583363 POTECB2RU33 542 aa19.97■□□□□ 0.79
CDK5RAP3-228ENST00000583363 GLRX3O76003 335 aaKnown RBP19.97■□□□□ 0.79
CDK5RAP3-228ENST00000583363 PHKA1P46020 1223 aa19.97■□□□□ 0.79
CDK5RAP3-228ENST00000583363 GYG1P46976 350 aa19.97■□□□□ 0.79
CDK5RAP3-228ENST00000583363 CAVIN4Q5BKX8 364 aa19.97■□□□□ 0.79
CDK5RAP3-228ENST00000583363 TXNRD3Q86VQ6 643 aa19.97■□□□□ 0.79
CDK5RAP3-228ENST00000583363 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.97■□□□□ 0.79
CDK5RAP3-228ENST00000583363 GPR101Q96P66 508 aaPredicted RBP19.97■□□□□ 0.79
CDK5RAP3-228ENST00000583363 HIBADHP31937 336 aaKnown RBP19.96■□□□□ 0.79
CDK5RAP3-228ENST00000583363 TTC39AQ5SRH9 613 aa19.96■□□□□ 0.79
CDK5RAP3-228ENST00000583363 TTC22Q5TAA0 569 aa19.96■□□□□ 0.79
CDK5RAP3-228ENST00000583363 BOLA2Q9H3K6 86 aa19.96■□□□□ 0.79
CDK5RAP3-228ENST00000583363 UQCRFS1P1P0C7P4 283 aa19.95■□□□□ 0.78
CDK5RAP3-228ENST00000583363 SUPT20HQ8NEM7 779 aa19.95■□□□□ 0.78
CDK5RAP3-228ENST00000583363 EYA3Q99504 573 aa19.95■□□□□ 0.78
CDK5RAP3-228ENST00000583363 LTBP1Q14766 1721 aa19.95■□□□□ 0.78
CDK5RAP3-228ENST00000583363 ZBTB22O15209 634 aa19.94■□□□□ 0.78
CDK5RAP3-228ENST00000583363 GSPT1P15170 499 aaKnown RBP19.94■□□□□ 0.78
CDK5RAP3-228ENST00000583363 ARID4AP29374 1257 aaPredicted RBP19.94■□□□□ 0.78
CDK5RAP3-228ENST00000583363 PSMD1Q99460 953 aa19.94■□□□□ 0.78
CDK5RAP3-228ENST00000583363 ZC3H12CQ9C0D7 883 aaKnown RBP19.94■□□□□ 0.78
CDK5RAP3-228ENST00000583363 GNL3LQ9NVN8 582 aaKnown RBP19.94■□□□□ 0.78
CDK5RAP3-228ENST00000583363 MED23Q9ULK4 1368 aa19.94■□□□□ 0.78
CDK5RAP3-228ENST00000583363 RIMBP2O15034 1052 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms