RNA–Protein interactions for RNA: ENST00000583320.5

SNX11-212, Transcript of sorting nexin 11, humanhuman

TSL 3

Gene SNX11, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-212ENST00000583320 CACNA1FO60840 1977 aa22.63■■□□□ 1.21
SNX11-212ENST00000583320 UFL1O94874 794 aa22.62■■□□□ 1.21
SNX11-212ENST00000583320 FKBP1BP68106 108 aa22.62■■□□□ 1.21
SNX11-212ENST00000583320 PRAMEF18Q5VWM3 479 aa22.62■■□□□ 1.21
SNX11-212ENST00000583320 RSBN1LQ6PCB5 846 aaPredicted RBP22.62■■□□□ 1.21
SNX11-212ENST00000583320 SEC31BQ9NQW1 1179 aa22.62■■□□□ 1.21
SNX11-212ENST00000583320 SMC4Q9NTJ3 1288 aa22.62■■□□□ 1.21
SNX11-212ENST00000583320 KIF16BQ96L93 1317 aa22.61■■□□□ 1.21
SNX11-212ENST00000583320 RPS8P62241 208 aaKnown RBP22.61■■□□□ 1.21
SNX11-212ENST00000583320 PDE3AQ14432 1141 aa22.61■■□□□ 1.21
SNX11-212ENST00000583320 PLBD2Q8NHP8 589 aa22.61■■□□□ 1.21
SNX11-212ENST00000583320 GMLQ99445 158 aa22.61■■□□□ 1.21
SNX11-212ENST00000583320 ZC3H12CQ9C0D7 883 aaKnown RBP22.61■■□□□ 1.21
SNX11-212ENST00000583320 R3HDMLQ9H3Y0 253 aa22.61■■□□□ 1.21
SNX11-212ENST00000583320 PODXL2Q9NZ53 605 aa22.61■■□□□ 1.21
SNX11-212ENST00000583320 GPR25O00155 361 aa22.6■■□□□ 1.21
SNX11-212ENST00000583320 MS4A1P11836 297 aa22.6■■□□□ 1.21
SNX11-212ENST00000583320 MYOZ2Q9NPC6 264 aa22.6■■□□□ 1.21
SNX11-212ENST00000583320 ZNF646O15015 1829 aaPredicted RBP22.59■■□□□ 1.21
SNX11-212ENST00000583320 ELL2O00472 640 aaPredicted RBP22.59■■□□□ 1.21
SNX11-212ENST00000583320 IRS4O14654 1257 aaPredicted RBP22.59■■□□□ 1.21
SNX11-212ENST00000583320 MKRN3Q13064 507 aaKnown RBP22.59■■□□□ 1.21
SNX11-212ENST00000583320 AGBL3Q8NEM8 1001 aa22.59■■□□□ 1.21
SNX11-212ENST00000583320 PITPNM2Q9BZ72 1349 aa22.58■■□□□ 1.21
SNX11-212ENST00000583320 IPO8O15397 1037 aaKnown RBP22.58■■□□□ 1.21
SNX11-212ENST00000583320 PLIN1O60240 522 aa22.58■■□□□ 1.21
SNX11-212ENST00000583320 ZKSCAN2Q63HK3 967 aa22.58■■□□□ 1.21
SNX11-212ENST00000583320 FBXO46Q6PJ61 603 aaPredicted RBP22.58■■□□□ 1.21
SNX11-212ENST00000583320 MRPL50Q8N5N7 158 aaKnown RBP22.58■■□□□ 1.21
SNX11-212ENST00000583320 TM4SF4P48230 202 aa22.57■■□□□ 1.2
SNX11-212ENST00000583320 IRX6P78412 446 aaPredicted RBP22.57■■□□□ 1.2
SNX11-212ENST00000583320 ANKRD13DQ6ZTN6 518 aa22.57■■□□□ 1.2
SNX11-212ENST00000583320 ARHGAP45Q92619 1136 aa22.57■■□□□ 1.2
SNX11-212ENST00000583320 ANKIB1Q9P2G1 1089 aa22.57■■□□□ 1.2
SNX11-212ENST00000583320 GGA1Q9UJY5 639 aa22.57■■□□□ 1.2
SNX11-212ENST00000583320 G3V3G9 751 aa22.56■■□□□ 1.2
SNX11-212ENST00000583320 USP17L8P0C7I0 530 aa22.56■■□□□ 1.2
SNX11-212ENST00000583320 NBPF9Q3BBW0 867 aa22.56■■□□□ 1.2
SNX11-212ENST00000583320 DCAF8Q5TAQ9 597 aa22.56■■□□□ 1.2
SNX11-212ENST00000583320 CENPFP49454 3210 aa22.56■■□□□ 1.2
SNX11-212ENST00000583320 WTIPA6NIX2 430 aaPredicted RBP22.55■■□□□ 1.2
SNX11-212ENST00000583320 NOM1Q5C9Z4 860 aaKnown RBP22.55■■□□□ 1.2
SNX11-212ENST00000583320 HABP4Q5JVS0 413 aaKnown RBP22.55■■□□□ 1.2
SNX11-212ENST00000583320 CCDC30Q5VVM6 783 aa22.55■■□□□ 1.2
SNX11-212ENST00000583320 HDGFL1Q5TGJ6 251 aa22.54■■□□□ 1.2
SNX11-212ENST00000583320 FRAT1Q92837 279 aaPredicted RBP22.54■■□□□ 1.2
SNX11-212ENST00000583320 MXD3Q9BW11 206 aa22.54■■□□□ 1.2
SNX11-212ENST00000583320 FKTNO75072 461 aa22.52■■□□□ 1.2
SNX11-212ENST00000583320 TRIM28Q13263 835 aaKnown RBP22.52■■□□□ 1.2
SNX11-212ENST00000583320 TTLL12Q14166 644 aaPredicted RBP22.52■■□□□ 1.2
SNX11-212ENST00000583320 ATF7IPQ6VMQ6 1270 aa22.52■■□□□ 1.2
SNX11-212ENST00000583320 CCDC85AQ96PX6 553 aaPredicted RBP22.52■■□□□ 1.2
SNX11-212ENST00000583320 NOB1Q9ULX3 412 aaKnown RBP22.52■■□□□ 1.2
SNX11-212ENST00000583320 BRCA2P51587 3418 aa22.52■■□□□ 1.2
SNX11-212ENST00000583320 POTEFA5A3E0 1075 aa22.51■■□□□ 1.19
SNX11-212ENST00000583320 PTPN12Q05209 780 aaKnown RBP22.51■■□□□ 1.19
SNX11-212ENST00000583320 JARID2Q92833 1246 aaPredicted RBP22.51■■□□□ 1.19
SNX11-212ENST00000583320 GCC1Q96CN9 775 aa22.51■■□□□ 1.19
SNX11-212ENST00000583320 CFHR5Q9BXR6 569 aa22.51■■□□□ 1.19
SNX11-212ENST00000583320 STK31Q9BXU1 1019 aa22.51■■□□□ 1.19
SNX11-212ENST00000583320 USP17L3A6NCW0 530 aa22.5■■□□□ 1.19
SNX11-212ENST00000583320 USP17L4A6NCW7 530 aa22.5■■□□□ 1.19
SNX11-212ENST00000583320 C20orf194Q5TEA3 1177 aa22.5■■□□□ 1.19
SNX11-212ENST00000583320 USP17L1Q7RTZ2 530 aa22.5■■□□□ 1.19
SNX11-212ENST00000583320 PPP4R2Q9NY27 417 aa22.5■■□□□ 1.19
SNX11-212ENST00000583320 PRKG1Q13976 671 aa22.49■■□□□ 1.19
SNX11-212ENST00000583320 DZIP1LQ8IYY4 767 aaKnown RBP22.49■■□□□ 1.19
SNX11-212ENST00000583320 ZBTB38Q8NAP3 1195 aaPredicted RBP22.49■■□□□ 1.19
SNX11-212ENST00000583320 CRBNQ96SW2 442 aa22.49■■□□□ 1.19
SNX11-212ENST00000583320 API5Q9BZZ5 524 aaKnown RBP22.49■■□□□ 1.19
SNX11-212ENST00000583320 DBF4Q9UBU7 674 aaPredicted RBP22.49■■□□□ 1.19
SNX11-212ENST00000583320 FZD1Q9UP38 647 aa22.49■■□□□ 1.19
SNX11-212ENST00000583320 PTPRCP08575 1304 aa22.49■■□□□ 1.19
SNX11-212ENST00000583320 XDHP47989 1333 aa22.49■■□□□ 1.19
SNX11-212ENST00000583320 SPEF2Q9C093 1822 aa22.48■■□□□ 1.19
SNX11-212ENST00000583320 KIAA0100Q14667 2235 aaKnown RBP22.48■■□□□ 1.19
SNX11-212ENST00000583320 WNT10BO00744 389 aa22.48■■□□□ 1.19
SNX11-212ENST00000583320 SASH1O94885 1247 aa22.48■■□□□ 1.19
SNX11-212ENST00000583320 TRIM27P14373 513 aa22.48■■□□□ 1.19
SNX11-212ENST00000583320 SREBF2Q12772 1141 aa22.48■■□□□ 1.19
SNX11-212ENST00000583320 AAMPQ13685 434 aa22.48■■□□□ 1.19
SNX11-212ENST00000583320 DACT2Q5SW24 774 aa22.48■■□□□ 1.19
SNX11-212ENST00000583320 PODNQ7Z5L7 613 aa22.47■■□□□ 1.19
SNX11-212ENST00000583320 EXOC6Q8TAG9 804 aa22.47■■□□□ 1.19
SNX11-212ENST00000583320 RBBP6Q7Z6E9 1792 aaKnown RBP22.47■■□□□ 1.19
SNX11-212ENST00000583320 SLC4A2P04920 1241 aa22.46■■□□□ 1.19
SNX11-212ENST00000583320 CCDC152Q4G0S7 254 aa22.46■■□□□ 1.19
SNX11-212ENST00000583320 HYPKQ9NX55 129 aa22.46■■□□□ 1.19
SNX11-212ENST00000583320 CEP290O15078 2479 aa22.46■■□□□ 1.19
SNX11-212ENST00000583320 SPRYD7Q5W111 196 aa22.45■■□□□ 1.18
SNX11-212ENST00000583320 OTOP1Q7RTM1 612 aa22.45■■□□□ 1.18
SNX11-212ENST00000583320 FTSJ3Q8IY81 847 aaKnown RBP22.45■■□□□ 1.18
SNX11-212ENST00000583320 TRIM17Q9Y577 477 aa22.45■■□□□ 1.18
SNX11-212ENST00000583320 ATP2B4P23634 1241 aa22.44■■□□□ 1.18
SNX11-212ENST00000583320 LDLRAD1Q5T700 205 aa22.44■■□□□ 1.18
SNX11-212ENST00000583320 PANK1Q8TE04 598 aa22.44■■□□□ 1.18
SNX11-212ENST00000583320 MYD88Q99836 296 aa22.44■■□□□ 1.18
SNX11-212ENST00000583320 PHAXQ9H814 394 aaKnown RBP22.44■■□□□ 1.18
SNX11-212ENST00000583320 MED23Q9ULK4 1368 aa22.44■■□□□ 1.18
SNX11-212ENST00000583320 SSC5DA1L4H1 1573 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms