RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 C15orf52Q6ZUT6 534 aaKnown RBP14.42□□□□□ -0.1
SMARCE1-214ENST00000578112 TTLL11Q8NHH1 800 aa14.42□□□□□ -0.1
SMARCE1-214ENST00000578112 MAP3K2Q9Y2U5 619 aa14.42□□□□□ -0.1
SMARCE1-214ENST00000578112 H7C1W4 665 aa14.41□□□□□ -0.1
SMARCE1-214ENST00000578112 EGFRP00533 1210 aa14.41□□□□□ -0.1
SMARCE1-214ENST00000578112 APOBEC3FQ8IUX4 373 aaKnown RBP14.41□□□□□ -0.1
SMARCE1-214ENST00000578112 IGHMBP2P38935 993 aaKnown RBP14.41□□□□□ -0.1
SMARCE1-214ENST00000578112 FKBP1AP62942 108 aaKnown RBP14.41□□□□□ -0.1
SMARCE1-214ENST00000578112 RBM26Q5T8P6 1007 aaKnown RBP14.41□□□□□ -0.1
SMARCE1-214ENST00000578112 OGFOD1Q8N543 542 aa14.41□□□□□ -0.1
SMARCE1-214ENST00000578112 C8orf58Q8NAV2 365 aa14.41□□□□□ -0.1
SMARCE1-214ENST00000578112 CSRNP1Q96S65 589 aa14.41□□□□□ -0.1
SMARCE1-214ENST00000578112 MYH16Q9H6N6 1097 aa14.41□□□□□ -0.1
SMARCE1-214ENST00000578112 KCNQ5Q9NR82 932 aa14.41□□□□□ -0.1
SMARCE1-214ENST00000578112 PCDH10Q9P2E7 1040 aa14.41□□□□□ -0.1
SMARCE1-214ENST00000578112 TSKSQ9UJT2 592 aa14.41□□□□□ -0.1
SMARCE1-214ENST00000578112 MINPP1Q9UNW1 487 aa14.41□□□□□ -0.1
SMARCE1-214ENST00000578112 PPP2R3BQ9Y5P8 575 aa14.41□□□□□ -0.1
SMARCE1-214ENST00000578112 ECM29Q5VYK3 1845 aa14.41□□□□□ -0.1
SMARCE1-214ENST00000578112 CCT4P50991 539 aaKnown RBP14.4□□□□□ -0.1
SMARCE1-214ENST00000578112 DACT2Q5SW24 774 aa14.4□□□□□ -0.1
SMARCE1-214ENST00000578112 HDAC9Q9UKV0 1011 aa14.4□□□□□ -0.1
SMARCE1-214ENST00000578112 CASP8AP2Q9UKL3 1982 aa14.4□□□□□ -0.1
SMARCE1-214ENST00000578112 SPEF2Q9C093 1822 aa14.4□□□□□ -0.1
SMARCE1-214ENST00000578112 TM4SF4P48230 202 aa14.4□□□□□ -0.1
SMARCE1-214ENST00000578112 NEURL1BA8MQ27 555 aa14.39□□□□□ -0.11
SMARCE1-214ENST00000578112 IGKV5-2P06315 115 aa14.39□□□□□ -0.11
SMARCE1-214ENST00000578112 SREBF2Q12772 1141 aa14.39□□□□□ -0.11
SMARCE1-214ENST00000578112 MTMR14Q8NCE2 650 aa14.39□□□□□ -0.11
SMARCE1-214ENST00000578112 RTL5Q5HYW3 569 aaPredicted RBP14.39□□□□□ -0.11
SMARCE1-214ENST00000578112 ZIC5Q96T25 663 aa14.39□□□□□ -0.11
SMARCE1-214ENST00000578112 PI4KAP2A4QPH2 592 aa14.38□□□□□ -0.11
SMARCE1-214ENST00000578112 ALDH1A1P00352 501 aa14.38□□□□□ -0.11
SMARCE1-214ENST00000578112 CSF1RP07333 972 aa14.38□□□□□ -0.11
SMARCE1-214ENST00000578112 ARMC9Q7Z3E5 817 aa14.38□□□□□ -0.11
SMARCE1-214ENST00000578112 PI4KAP1Q8N8J0 262 aa14.38□□□□□ -0.11
SMARCE1-214ENST00000578112 ZBED3Q96IU2 234 aaPredicted RBP14.38□□□□□ -0.11
SMARCE1-214ENST00000578112 A0A1B0GUL6 1792 aa14.38□□□□□ -0.11
SMARCE1-214ENST00000578112 INHBEP58166 350 aa14.37□□□□□ -0.11
SMARCE1-214ENST00000578112 ZNF804BA4D1E1 1349 aa14.36□□□□□ -0.11
SMARCE1-214ENST00000578112 TRPA1O75762 1119 aa14.36□□□□□ -0.11
SMARCE1-214ENST00000578112 MAP3K11Q16584 847 aa14.36□□□□□ -0.11
SMARCE1-214ENST00000578112 LINS1Q8NG48 757 aa14.36□□□□□ -0.11
SMARCE1-214ENST00000578112 GREM2Q9H772 168 aa14.36□□□□□ -0.11
SMARCE1-214ENST00000578112 GCKRQ14397 625 aa14.36□□□□□ -0.11
SMARCE1-214ENST00000578112 TWISTNBQ3B726 338 aaPredicted RBP14.36□□□□□ -0.11
SMARCE1-214ENST00000578112 CASP7P55210 303 aa14.35□□□□□ -0.11
SMARCE1-214ENST00000578112 ASTN2O75129 1339 aaPredicted RBP14.35□□□□□ -0.11
SMARCE1-214ENST00000578112 WNT10BO00744 389 aa14.34□□□□□ -0.11
SMARCE1-214ENST00000578112 WDR63Q8IWG1 891 aa14.34□□□□□ -0.11
SMARCE1-214ENST00000578112 MPHOSPH8Q99549 860 aa14.34□□□□□ -0.11
SMARCE1-214ENST00000578112 ELL2O00472 640 aaPredicted RBP14.34□□□□□ -0.11
SMARCE1-214ENST00000578112 LDLRAD1Q5T700 205 aa14.34□□□□□ -0.11
SMARCE1-214ENST00000578112 ARAP2Q8WZ64 1704 aa14.34□□□□□ -0.11
SMARCE1-214ENST00000578112 ANKRD18BA2A2Z9 1011 aa14.33□□□□□ -0.11
SMARCE1-214ENST00000578112 MANSC4A6NHS7 340 aaPredicted RBP14.33□□□□□ -0.11
SMARCE1-214ENST00000578112 WWC1Q8IX03 1113 aa14.33□□□□□ -0.11
SMARCE1-214ENST00000578112 DNAAF4Q8WXU2 420 aa14.33□□□□□ -0.11
SMARCE1-214ENST00000578112 IRS2Q9Y4H2 1338 aa14.33□□□□□ -0.12
SMARCE1-214ENST00000578112 ZBTB48P10074 688 aaPredicted RBP14.33□□□□□ -0.12
SMARCE1-214ENST00000578112 ITGA6P23229 1130 aa14.33□□□□□ -0.12
SMARCE1-214ENST00000578112 FLIIQ13045 1269 aa14.33□□□□□ -0.12
SMARCE1-214ENST00000578112 TTLL5Q6EMB2 1281 aa14.33□□□□□ -0.12
SMARCE1-214ENST00000578112 DLK2Q6UY11 383 aa14.33□□□□□ -0.12
SMARCE1-214ENST00000578112 TSPYL6Q8N831 410 aa14.33□□□□□ -0.12
SMARCE1-214ENST00000578112 FBXO46Q6PJ61 603 aaPredicted RBP14.32□□□□□ -0.12
SMARCE1-214ENST00000578112 UBE3BQ7Z3V4 1068 aa14.32□□□□□ -0.12
SMARCE1-214ENST00000578112 IL1R1P14778 569 aa14.32□□□□□ -0.12
SMARCE1-214ENST00000578112 NBPF9Q3BBW0 867 aa14.32□□□□□ -0.12
SMARCE1-214ENST00000578112 ZNF804AQ7Z570 1209 aa14.32□□□□□ -0.12
SMARCE1-214ENST00000578112 SLC4A2P04920 1241 aa14.31□□□□□ -0.12
SMARCE1-214ENST00000578112 KCNJ4P48050 445 aa14.31□□□□□ -0.12
SMARCE1-214ENST00000578112 CD209Q9NNX6 404 aa14.31□□□□□ -0.12
SMARCE1-214ENST00000578112 GPR25O00155 361 aa14.31□□□□□ -0.12
SMARCE1-214ENST00000578112 MYO1BO43795 1136 aa14.31□□□□□ -0.12
SMARCE1-214ENST00000578112 FKTNO75072 461 aa14.31□□□□□ -0.12
SMARCE1-214ENST00000578112 CWF19L2Q2TBE0 894 aaKnown RBP14.31□□□□□ -0.12
SMARCE1-214ENST00000578112 SUPT20HL1Q3ZLR7 823 aa14.31□□□□□ -0.12
SMARCE1-214ENST00000578112 ZNF428Q96B54 188 aa14.31□□□□□ -0.12
SMARCE1-214ENST00000578112 CCDC85AQ96PX6 553 aaPredicted RBP14.31□□□□□ -0.12
SMARCE1-214ENST00000578112 HPS5Q9UPZ3 1129 aa14.31□□□□□ -0.12
SMARCE1-214ENST00000578112 RBBP6Q7Z6E9 1792 aaKnown RBP14.31□□□□□ -0.12
SMARCE1-214ENST00000578112 CHRNDQ07001 517 aa14.3□□□□□ -0.12
SMARCE1-214ENST00000578112 TTLL12Q14166 644 aaPredicted RBP14.3□□□□□ -0.12
SMARCE1-214ENST00000578112 PRPF38BQ5VTL8 546 aaKnown RBP14.3□□□□□ -0.12
SMARCE1-214ENST00000578112 SPRYD7Q5W111 196 aa14.3□□□□□ -0.12
SMARCE1-214ENST00000578112 UBE2Q2LH0YL09 131 aa14.3□□□□□ -0.12
SMARCE1-214ENST00000578112 DLGAP5Q15398 846 aa14.3□□□□□ -0.12
SMARCE1-214ENST00000578112 IFIT5Q13325 482 aaKnown RBP14.29□□□□□ -0.12
SMARCE1-214ENST00000578112 ZNF296Q8WUU4 475 aaPredicted RBP14.29□□□□□ -0.12
SMARCE1-214ENST00000578112 JARID2Q92833 1246 aaPredicted RBP14.29□□□□□ -0.12
SMARCE1-214ENST00000578112 FAM205AQ6ZU69 1335 aa14.29□□□□□ -0.12
SMARCE1-214ENST00000578112 ALDH1L1O75891 902 aa14.29□□□□□ -0.12
SMARCE1-214ENST00000578112 FKBP5Q13451 457 aaPredicted RBP14.29□□□□□ -0.12
SMARCE1-214ENST00000578112 INTS3Q68E01 1043 aaKnown RBP14.29□□□□□ -0.12
SMARCE1-214ENST00000578112 TSR2Q969E8 191 aaKnown RBP14.29□□□□□ -0.12
SMARCE1-214ENST00000578112 PPP1R12BO60237 982 aaPredicted RBP14.28□□□□□ -0.12
SMARCE1-214ENST00000578112 OTUD7BQ6GQQ9 843 aa14.28□□□□□ -0.12
SMARCE1-214ENST00000578112 G2E3Q7L622 706 aa14.28□□□□□ -0.12
SMARCE1-214ENST00000578112 FANCIQ9NVI1 1328 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms