RNA–Protein interactions for RNA: ENST00000578010.1

PPP4R1-207, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-207ENST00000578010 NSFL1CQ9UNZ2 370 aaKnown RBP8.36□□□□□ -1.07
PPP4R1-207ENST00000578010 ATP6V0A2Q9Y487 856 aa8.36□□□□□ -1.07
PPP4R1-207ENST00000578010 TIAM2Q8IVF5 1701 aa8.36□□□□□ -1.07
PPP4R1-207ENST00000578010 C6orf229H3BNL8 230 aa8.35□□□□□ -1.07
PPP4R1-207ENST00000578010 CENPBP07199 599 aaPredicted RBP8.35□□□□□ -1.07
PPP4R1-207ENST00000578010 DPP8Q6V1X1 898 aaPredicted RBP8.35□□□□□ -1.07
PPP4R1-207ENST00000578010 ANKRD44Q8N8A2 993 aa8.35□□□□□ -1.07
PPP4R1-207ENST00000578010 C7orf43Q8WVR3 580 aa8.35□□□□□ -1.07
PPP4R1-207ENST00000578010 C1orf115Q9H7X2 142 aa8.35□□□□□ -1.07
PPP4R1-207ENST00000578010 DDX19BQ9UMR2 479 aa8.35□□□□□ -1.07
PPP4R1-207ENST00000578010 MYH3P11055 1940 aa8.35□□□□□ -1.07
PPP4R1-207ENST00000578010 SPEF2Q9C093 1822 aa8.34□□□□□ -1.07
PPP4R1-207ENST00000578010 SRGAP3O43295 1099 aa8.34□□□□□ -1.07
PPP4R1-207ENST00000578010 ATP8B2P98198 1209 aa8.34□□□□□ -1.07
PPP4R1-207ENST00000578010 GRIPAP1Q4V328 841 aa8.34□□□□□ -1.07
PPP4R1-207ENST00000578010 TMC4Q7Z404 712 aa8.34□□□□□ -1.07
PPP4R1-207ENST00000578010 CRBNQ96SW2 442 aa8.34□□□□□ -1.07
PPP4R1-207ENST00000578010 BSDC1Q9NW68 430 aaPredicted RBP8.34□□□□□ -1.07
PPP4R1-207ENST00000578010 MINPP1Q9UNW1 487 aa8.34□□□□□ -1.07
PPP4R1-207ENST00000578010 RIC1Q4ADV7 1423 aa8.34□□□□□ -1.07
PPP4R1-207ENST00000578010 SBF1O95248 1867 aa8.34□□□□□ -1.07
PPP4R1-207ENST00000578010 RIMBP2O15034 1052 aa8.33□□□□□ -1.08
PPP4R1-207ENST00000578010 TAF1P21675 1872 aa8.33□□□□□ -1.08
PPP4R1-207ENST00000578010 KCNJ4P48050 445 aa8.33□□□□□ -1.08
PPP4R1-207ENST00000578010 IRX6P78412 446 aaPredicted RBP8.33□□□□□ -1.08
PPP4R1-207ENST00000578010 GPSM2P81274 684 aa8.33□□□□□ -1.08
PPP4R1-207ENST00000578010 RASSF7Q02833 373 aa8.33□□□□□ -1.08
PPP4R1-207ENST00000578010 FER1L6Q2WGJ9 1857 aa8.33□□□□□ -1.08
PPP4R1-207ENST00000578010 RABL6Q3YEC7 729 aaPredicted RBP8.33□□□□□ -1.08
PPP4R1-207ENST00000578010 SUPT20HQ8NEM7 779 aa8.33□□□□□ -1.08
PPP4R1-207ENST00000578010 HELBQ8NG08 1087 aaPredicted RBP8.33□□□□□ -1.08
PPP4R1-207ENST00000578010 KLHDC4Q8TBB5 520 aa8.33□□□□□ -1.08
PPP4R1-207ENST00000578010 ZNF526Q8TF50 670 aaPredicted RBP8.33□□□□□ -1.08
PPP4R1-207ENST00000578010 BBXQ8WY36 941 aaPredicted RBP8.33□□□□□ -1.08
PPP4R1-207ENST00000578010 PUS3Q9BZE2 481 aaKnown RBP8.33□□□□□ -1.08
PPP4R1-207ENST00000578010 ANKRD2Q9GZV1 360 aa8.33□□□□□ -1.08
PPP4R1-207ENST00000578010 TAOK3Q9H2K8 898 aa8.33□□□□□ -1.08
PPP4R1-207ENST00000578010 ZNF277Q9NRM2 450 aaPredicted RBP8.33□□□□□ -1.08
PPP4R1-207ENST00000578010 GTPBP6O43824 516 aaPredicted RBP8.32□□□□□ -1.08
PPP4R1-207ENST00000578010 TAF5LO75529 589 aa8.32□□□□□ -1.08
PPP4R1-207ENST00000578010 PPP1R37O75864 691 aa8.32□□□□□ -1.08
PPP4R1-207ENST00000578010 ATP2B4P23634 1241 aa8.32□□□□□ -1.08
PPP4R1-207ENST00000578010 FKBP4Q02790 459 aaKnown RBP eCLIP8.32□□□□□ -1.08
PPP4R1-207ENST00000578010 G3BP1Q13283 466 aaKnown RBP eCLIP8.32□□□□□ -1.08
PPP4R1-207ENST00000578010 LRRC24Q50LG9 513 aa8.32□□□□□ -1.08
PPP4R1-207ENST00000578010 METTL24Q5JXM2 366 aa8.32□□□□□ -1.08
PPP4R1-207ENST00000578010 C9orf131Q5VYM1 1079 aa8.32□□□□□ -1.08
PPP4R1-207ENST00000578010 SLC51AQ86UW1 340 aa8.32□□□□□ -1.08
PPP4R1-207ENST00000578010 ZC3H12CQ9C0D7 883 aaKnown RBP8.32□□□□□ -1.08
PPP4R1-207ENST00000578010 BCL11AQ9H165 835 aa8.32□□□□□ -1.08
PPP4R1-207ENST00000578010 SIL1Q9H173 461 aa8.32□□□□□ -1.08
PPP4R1-207ENST00000578010 ZBTB40Q9NUA8 1239 aa8.32□□□□□ -1.08
PPP4R1-207ENST00000578010 RNF181Q9P0P0 153 aa8.32□□□□□ -1.08
PPP4R1-207ENST00000578010 GGA1Q9UJY5 639 aa8.32□□□□□ -1.08
PPP4R1-207ENST00000578010 PA2G4Q9UQ80 394 aaKnown RBP8.32□□□□□ -1.08
PPP4R1-207ENST00000578010 DICER1Q9UPY3 1922 aaKnown RBP8.31□□□□□ -1.08
PPP4R1-207ENST00000578010 PNMA6EA0A0J9YXQ4 647 aa8.31□□□□□ -1.08
PPP4R1-207ENST00000578010 EYA2O00167 538 aa8.31□□□□□ -1.08
PPP4R1-207ENST00000578010 NFKBIEO00221 500 aa8.31□□□□□ -1.08
PPP4R1-207ENST00000578010 SURF6O75683 361 aaKnown RBP8.31□□□□□ -1.08
PPP4R1-207ENST00000578010 UFL1O94874 794 aa8.31□□□□□ -1.08
PPP4R1-207ENST00000578010 LMNB1P20700 586 aa8.31□□□□□ -1.08
PPP4R1-207ENST00000578010 PTPN12Q05209 780 aaKnown RBP8.31□□□□□ -1.08
PPP4R1-207ENST00000578010 CHRNDQ07001 517 aa8.31□□□□□ -1.08
PPP4R1-207ENST00000578010 OS9Q13438 667 aaPredicted RBP8.31□□□□□ -1.08
PPP4R1-207ENST00000578010 WASHC4Q2M389 1173 aa8.31□□□□□ -1.08
PPP4R1-207ENST00000578010 RPAP2Q8IXW5 612 aaPredicted RBP8.31□□□□□ -1.08
PPP4R1-207ENST00000578010 LARGE2Q8N3Y3 721 aa8.31□□□□□ -1.08
PPP4R1-207ENST00000578010 TBC1D16Q8TBP0 767 aa8.31□□□□□ -1.08
PPP4R1-207ENST00000578010 JDP2Q8WYK2 163 aa8.31□□□□□ -1.08
PPP4R1-207ENST00000578010 GPR101Q96P66 508 aaPredicted RBP8.31□□□□□ -1.08
PPP4R1-207ENST00000578010 EYA3Q99504 573 aa8.31□□□□□ -1.08
PPP4R1-207ENST00000578010 CEP126Q9P2H0 1117 aa8.31□□□□□ -1.08
PPP4R1-207ENST00000578010 POLLQ9UGP5 575 aa8.31□□□□□ -1.08
PPP4R1-207ENST00000578010 LEMD3Q9Y2U8 911 aa8.31□□□□□ -1.08
PPP4R1-207ENST00000578010 RIPOR2Q9Y4F9 1068 aa8.31□□□□□ -1.08
PPP4R1-207ENST00000578010 WTIPA6NIX2 430 aaPredicted RBP8.3□□□□□ -1.08
PPP4R1-207ENST00000578010 SNAP23O00161 211 aa8.3□□□□□ -1.08
PPP4R1-207ENST00000578010 PPIP5K2O43314 1243 aa8.3□□□□□ -1.08
PPP4R1-207ENST00000578010 HMMRO75330 724 aa8.3□□□□□ -1.08
PPP4R1-207ENST00000578010 IARSP41252 1262 aaKnown RBP8.3□□□□□ -1.08
PPP4R1-207ENST00000578010 RFX5P48382 616 aaPredicted RBP8.3□□□□□ -1.08
PPP4R1-207ENST00000578010 AOC3Q16853 763 aa8.3□□□□□ -1.08
PPP4R1-207ENST00000578010 DOK7Q18PE1 504 aa8.3□□□□□ -1.08
PPP4R1-207ENST00000578010 TMEM92Q6UXU6 159 aa8.3□□□□□ -1.08
PPP4R1-207ENST00000578010 EXOC6Q8TAG9 804 aa8.3□□□□□ -1.08
PPP4R1-207ENST00000578010 FAM163AQ96GL9 167 aaPredicted RBP8.3□□□□□ -1.08
PPP4R1-207ENST00000578010 PSMD1Q99460 953 aa8.3□□□□□ -1.08
PPP4R1-207ENST00000578010 RTL9Q8NET4 1388 aa8.3□□□□□ -1.08
PPP4R1-207ENST00000578010 XDHP47989 1333 aa8.29□□□□□ -1.08
PPP4R1-207ENST00000578010 APBB1O00213 710 aa8.29□□□□□ -1.08
PPP4R1-207ENST00000578010 KIF3CO14782 793 aa8.29□□□□□ -1.08
PPP4R1-207ENST00000578010 IL15P40933 162 aaPredicted RBP8.29□□□□□ -1.08
PPP4R1-207ENST00000578010 CEP85Q6P2H3 762 aa8.29□□□□□ -1.08
PPP4R1-207ENST00000578010 NIM1KQ8IY84 436 aa8.29□□□□□ -1.08
PPP4R1-207ENST00000578010 ZNF784Q8NCA9 323 aaPredicted RBP8.29□□□□□ -1.08
PPP4R1-207ENST00000578010 VPS33BQ9H267 617 aa8.29□□□□□ -1.08
PPP4R1-207ENST00000578010 GPBP1L1Q9HC44 474 aaPredicted RBP8.29□□□□□ -1.08
PPP4R1-207ENST00000578010 COPRSQ9NQ92 184 aa8.29□□□□□ -1.08
PPP4R1-207ENST00000578010 PODXL2Q9NZ53 605 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms