RNA–Protein interactions for RNA: ENST00000577169.1

NCBP3-207, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-207ENST00000577169 RBM46Q8TBY0 533 aaKnown RBP19.57■□□□□ 0.72
NCBP3-207ENST00000577169 SIL1Q9H173 461 aa19.57■□□□□ 0.72
NCBP3-207ENST00000577169 SCN4AP35499 1836 aa19.57■□□□□ 0.72
NCBP3-207ENST00000577169 A0A1B0GUL6 1792 aa19.57■□□□□ 0.72
NCBP3-207ENST00000577169 IRS2Q9Y4H2 1338 aa19.56■□□□□ 0.72
NCBP3-207ENST00000577169 VIL1P09327 827 aaKnown RBP19.56■□□□□ 0.72
NCBP3-207ENST00000577169 ATG9AQ7Z3C6 839 aa19.56■□□□□ 0.72
NCBP3-207ENST00000577169 C1orf115Q9H7X2 142 aa19.56■□□□□ 0.72
NCBP3-207ENST00000577169 COPRSQ9NQ92 184 aa19.56■□□□□ 0.72
NCBP3-207ENST00000577169 GPRC5DQ9NZD1 345 aa19.56■□□□□ 0.72
NCBP3-207ENST00000577169 COG6Q9Y2V7 657 aa19.56■□□□□ 0.72
NCBP3-207ENST00000577169 SCN9AQ15858 1988 aa19.55■□□□□ 0.72
NCBP3-207ENST00000577169 PNMA6EA0A0J9YXQ4 647 aa19.55■□□□□ 0.72
NCBP3-207ENST00000577169 PDE8BO95263 885 aa19.55■□□□□ 0.72
NCBP3-207ENST00000577169 POTEIP0CG38 1075 aa19.55■□□□□ 0.72
NCBP3-207ENST00000577169 POTEJP0CG39 1038 aa19.55■□□□□ 0.72
NCBP3-207ENST00000577169 ATP8B2P98198 1209 aa19.55■□□□□ 0.72
NCBP3-207ENST00000577169 EAPPQ56P03 285 aaPredicted RBP19.55■□□□□ 0.72
NCBP3-207ENST00000577169 VGLL2Q8N8G2 317 aa19.55■□□□□ 0.72
NCBP3-207ENST00000577169 CD209Q9NNX6 404 aa19.55■□□□□ 0.72
NCBP3-207ENST00000577169 CNOT7Q9UIV1 285 aaKnown RBP19.55■□□□□ 0.72
NCBP3-207ENST00000577169 FBXO3Q9UK99 471 aa19.55■□□□□ 0.72
NCBP3-207ENST00000577169 USP17L3A6NCW0 530 aa19.54■□□□□ 0.72
NCBP3-207ENST00000577169 USP17L4A6NCW7 530 aa19.54■□□□□ 0.72
NCBP3-207ENST00000577169 CIAO1O76071 339 aa19.54■□□□□ 0.72
NCBP3-207ENST00000577169 MVPQ14764 893 aaKnown RBP19.54■□□□□ 0.72
NCBP3-207ENST00000577169 C20orf194Q5TEA3 1177 aa19.54■□□□□ 0.72
NCBP3-207ENST00000577169 USP17L1Q7RTZ2 530 aa19.54■□□□□ 0.72
NCBP3-207ENST00000577169 DPF2Q92785 391 aa19.54■□□□□ 0.72
NCBP3-207ENST00000577169 PDE3AQ14432 1141 aa19.53■□□□□ 0.72
NCBP3-207ENST00000577169 PNMA8AQ86V59 439 aaPredicted RBP19.53■□□□□ 0.72
NCBP3-207ENST00000577169 CEP126Q9P2H0 1117 aa19.53■□□□□ 0.72
NCBP3-207ENST00000577169 CLEC11AQ9Y240 323 aa19.53■□□□□ 0.72
NCBP3-207ENST00000577169 SHTN1A0MZ66 631 aa19.52■□□□□ 0.72
NCBP3-207ENST00000577169 IL15P40933 162 aaPredicted RBP19.52■□□□□ 0.72
NCBP3-207ENST00000577169 GYG1P46976 350 aa19.52■□□□□ 0.72
NCBP3-207ENST00000577169 FSTL1Q12841 308 aa19.52■□□□□ 0.72
NCBP3-207ENST00000577169 TTLL5Q6EMB2 1281 aa19.52■□□□□ 0.72
NCBP3-207ENST00000577169 RSBN1LQ6PCB5 846 aaPredicted RBP19.52■□□□□ 0.72
NCBP3-207ENST00000577169 ZNF804AQ7Z570 1209 aa19.52■□□□□ 0.72
NCBP3-207ENST00000577169 SMC1BQ8NDV3 1235 aa19.52■□□□□ 0.72
NCBP3-207ENST00000577169 FBXW7Q969H0 707 aa19.52■□□□□ 0.72
NCBP3-207ENST00000577169 FAM84BQ96KN1 310 aaPredicted RBP19.52■□□□□ 0.72
NCBP3-207ENST00000577169 H7C1D1 291 aa19.51■□□□□ 0.71
NCBP3-207ENST00000577169 FGFR2P21802 821 aa19.51■□□□□ 0.71
NCBP3-207ENST00000577169 RPS12P25398 132 aaKnown RBP19.51■□□□□ 0.71
NCBP3-207ENST00000577169 HIBADHP31937 336 aaKnown RBP19.51■□□□□ 0.71
NCBP3-207ENST00000577169 MICALL2Q8IY33 904 aa19.51■□□□□ 0.71
NCBP3-207ENST00000577169 MXD3Q9BW11 206 aa19.51■□□□□ 0.71
NCBP3-207ENST00000577169 ADARB2Q9NS39 739 aaKnown RBP19.51■□□□□ 0.71
NCBP3-207ENST00000577169 DDX19BQ9UMR2 479 aa19.51■□□□□ 0.71
NCBP3-207ENST00000577169 IL1R1P14778 569 aa19.5■□□□□ 0.71
NCBP3-207ENST00000577169 GTF2IP78347 998 aa19.5■□□□□ 0.71
NCBP3-207ENST00000577169 POLA2Q14181 598 aa19.5■□□□□ 0.71
NCBP3-207ENST00000577169 STRIP1Q5VSL9 837 aa19.5■□□□□ 0.71
NCBP3-207ENST00000577169 CHADLQ6NUI6 762 aa19.5■□□□□ 0.71
NCBP3-207ENST00000577169 USP50Q70EL3 339 aaPredicted RBP19.5■□□□□ 0.71
NCBP3-207ENST00000577169 FBXO33Q7Z6M2 555 aa19.5■□□□□ 0.71
NCBP3-207ENST00000577169 LDHDQ86WU2 507 aa19.5■□□□□ 0.71
NCBP3-207ENST00000577169 AGBL3Q8NEM8 1001 aa19.5■□□□□ 0.71
NCBP3-207ENST00000577169 IFIT1P09914 478 aaKnown RBP19.49■□□□□ 0.71
NCBP3-207ENST00000577169 PUM3Q15397 648 aaKnown RBP19.49■□□□□ 0.71
NCBP3-207ENST00000577169 DACT2Q5SW24 774 aa19.49■□□□□ 0.71
NCBP3-207ENST00000577169 SSH3Q8TE77 659 aa19.49■□□□□ 0.71
NCBP3-207ENST00000577169 GMLQ99445 158 aa19.49■□□□□ 0.71
NCBP3-207ENST00000577169 PSME4Q14997 1843 aa19.48■□□□□ 0.71
NCBP3-207ENST00000577169 HIRAP54198 1017 aaPredicted RBP19.48■□□□□ 0.71
NCBP3-207ENST00000577169 G3BP1Q13283 466 aaKnown RBP eCLIP19.48■□□□□ 0.71
NCBP3-207ENST00000577169 SAMD7Q7Z3H4 446 aa19.48■□□□□ 0.71
NCBP3-207ENST00000577169 TDRD7Q8NHU6 1098 aaKnown RBP19.48■□□□□ 0.71
NCBP3-207ENST00000577169 LPIN2Q92539 896 aa19.48■□□□□ 0.71
NCBP3-207ENST00000577169 ZBTB40Q9NUA8 1239 aa19.48■□□□□ 0.71
NCBP3-207ENST00000577169 SLC5A1P13866 664 aa19.47■□□□□ 0.71
NCBP3-207ENST00000577169 BCAMP50895 628 aa19.47■□□□□ 0.71
NCBP3-207ENST00000577169 TFCP2Q12800 502 aa19.47■□□□□ 0.71
NCBP3-207ENST00000577169 CAVIN4Q5BKX8 364 aa19.47■□□□□ 0.71
NCBP3-207ENST00000577169 RBM26Q5T8P6 1007 aaKnown RBP19.47■□□□□ 0.71
NCBP3-207ENST00000577169 CEP85Q6P2H3 762 aa19.47■□□□□ 0.71
NCBP3-207ENST00000577169 VPS37DQ86XT2 251 aa19.47■□□□□ 0.71
NCBP3-207ENST00000577169 CHMP4BQ9H444 224 aaKnown RBP19.47■□□□□ 0.71
NCBP3-207ENST00000577169 SASH1O94885 1247 aa19.46■□□□□ 0.71
NCBP3-207ENST00000577169 ATP2B3Q16720 1220 aa19.46■□□□□ 0.71
NCBP3-207ENST00000577169 TBC1D10BQ4KMP7 808 aaPredicted RBP19.46■□□□□ 0.71
NCBP3-207ENST00000577169 MAP1SQ66K74 1059 aaPredicted RBP19.46■□□□□ 0.71
NCBP3-207ENST00000577169 TRPM4Q8TD43 1214 aa19.46■□□□□ 0.71
NCBP3-207ENST00000577169 SURF6O75683 361 aaKnown RBP19.45■□□□□ 0.7
NCBP3-207ENST00000577169 EGFRP00533 1210 aa19.45■□□□□ 0.7
NCBP3-207ENST00000577169 USP17L8P0C7I0 530 aa19.45■□□□□ 0.7
NCBP3-207ENST00000577169 HSPA6P17066 643 aa19.45■□□□□ 0.7
NCBP3-207ENST00000577169 RRP1P56182 461 aaKnown RBP19.45■□□□□ 0.7
NCBP3-207ENST00000577169 TIMM10P62072 90 aa19.45■□□□□ 0.7
NCBP3-207ENST00000577169 IQSEC3Q9UPP2 1182 aaPredicted RBP19.45■□□□□ 0.7
NCBP3-207ENST00000577169 JAG2Q9Y219 1238 aa19.45■□□□□ 0.7
NCBP3-207ENST00000577169 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.45■□□□□ 0.7
NCBP3-207ENST00000577169 ZNF280AP59817 542 aaPredicted RBP19.44■□□□□ 0.7
NCBP3-207ENST00000577169 CNTROBQ8N137 903 aa19.44■□□□□ 0.7
NCBP3-207ENST00000577169 MYO3BQ8WXR4 1341 aa19.44■□□□□ 0.7
NCBP3-207ENST00000577169 ADAMTSL1Q8N6G6 1762 aa19.43■□□□□ 0.7
NCBP3-207ENST00000577169 FRAT2O75474 233 aaPredicted RBP19.43■□□□□ 0.7
NCBP3-207ENST00000577169 ITGBL1O95965 494 aaPredicted RBP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms