RNA–Protein interactions for RNA: ENST00000575639.1

TRAPPC1-207, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-207ENST00000575639 POTECB2RU33 542 aa18.62■□□□□ 0.57
TRAPPC1-207ENST00000575639 ZNF804AQ7Z570 1209 aa18.62■□□□□ 0.57
TRAPPC1-207ENST00000575639 SIL1Q9H173 461 aa18.62■□□□□ 0.57
TRAPPC1-207ENST00000575639 COL4A5P29400 1685 aa18.62■□□□□ 0.57
TRAPPC1-207ENST00000575639 WDR90Q96KV7 1748 aa18.62■□□□□ 0.57
TRAPPC1-207ENST00000575639 SNAP23O00161 211 aa18.61■□□□□ 0.57
TRAPPC1-207ENST00000575639 PSMD14O00487 310 aa18.61■□□□□ 0.57
TRAPPC1-207ENST00000575639 PDE8BO95263 885 aa18.61■□□□□ 0.57
TRAPPC1-207ENST00000575639 IL15P40933 162 aaPredicted RBP18.61■□□□□ 0.57
TRAPPC1-207ENST00000575639 CEP126Q9P2H0 1117 aa18.61■□□□□ 0.57
TRAPPC1-207ENST00000575639 USP17L3A6NCW0 530 aa18.6■□□□□ 0.57
TRAPPC1-207ENST00000575639 USP17L4A6NCW7 530 aa18.6■□□□□ 0.57
TRAPPC1-207ENST00000575639 RPS12P25398 132 aaKnown RBP18.6■□□□□ 0.57
TRAPPC1-207ENST00000575639 GMPSP49915 693 aaPredicted RBP18.6■□□□□ 0.57
TRAPPC1-207ENST00000575639 ATP8B2P98198 1209 aa18.6■□□□□ 0.57
TRAPPC1-207ENST00000575639 USP17L1Q7RTZ2 530 aa18.6■□□□□ 0.57
TRAPPC1-207ENST00000575639 PNMA8AQ86V59 439 aaPredicted RBP18.6■□□□□ 0.57
TRAPPC1-207ENST00000575639 TXNRD3Q86VQ6 643 aa18.6■□□□□ 0.57
TRAPPC1-207ENST00000575639 RBM46Q8TBY0 533 aaKnown RBP18.6■□□□□ 0.57
TRAPPC1-207ENST00000575639 TAF1DQ9H5J8 278 aaPredicted RBP18.6■□□□□ 0.57
TRAPPC1-207ENST00000575639 C1orf115Q9H7X2 142 aa18.6■□□□□ 0.57
TRAPPC1-207ENST00000575639 KCNQ5Q9NR82 932 aa18.6■□□□□ 0.57
TRAPPC1-207ENST00000575639 PA2G4Q9UQ80 394 aaKnown RBP18.6■□□□□ 0.57
TRAPPC1-207ENST00000575639 VIL1P09327 827 aaKnown RBP18.59■□□□□ 0.57
TRAPPC1-207ENST00000575639 IFIT1P09914 478 aaKnown RBP18.59■□□□□ 0.57
TRAPPC1-207ENST00000575639 KLRK1P26718 216 aa18.59■□□□□ 0.57
TRAPPC1-207ENST00000575639 EPHX2P34913 555 aa18.59■□□□□ 0.57
TRAPPC1-207ENST00000575639 PUM3Q15397 648 aaKnown RBP18.59■□□□□ 0.57
TRAPPC1-207ENST00000575639 ATG9AQ7Z3C6 839 aa18.59■□□□□ 0.57
TRAPPC1-207ENST00000575639 TIAM2Q8IVF5 1701 aa18.58■□□□□ 0.57
TRAPPC1-207ENST00000575639 SCNN1DP51172 638 aa18.58■□□□□ 0.56
TRAPPC1-207ENST00000575639 G3BP1Q13283 466 aaKnown RBP eCLIP18.58■□□□□ 0.56
TRAPPC1-207ENST00000575639 CAVIN4Q5BKX8 364 aa18.58■□□□□ 0.56
TRAPPC1-207ENST00000575639 VPS37DQ86XT2 251 aa18.58■□□□□ 0.56
TRAPPC1-207ENST00000575639 VGLL2Q8N8G2 317 aa18.58■□□□□ 0.56
TRAPPC1-207ENST00000575639 DPF2Q92785 391 aa18.58■□□□□ 0.56
TRAPPC1-207ENST00000575639 CD209Q9NNX6 404 aa18.58■□□□□ 0.56
TRAPPC1-207ENST00000575639 GPRC5DQ9NZD1 345 aa18.58■□□□□ 0.56
TRAPPC1-207ENST00000575639 DICER1Q9UPY3 1922 aaKnown RBP18.57■□□□□ 0.56
TRAPPC1-207ENST00000575639 PNMA6EA0A0J9YXQ4 647 aa18.57■□□□□ 0.56
TRAPPC1-207ENST00000575639 H7C1D1 291 aa18.57■□□□□ 0.56
TRAPPC1-207ENST00000575639 HIBADHP31937 336 aaKnown RBP18.57■□□□□ 0.56
TRAPPC1-207ENST00000575639 EPS15P42566 896 aa18.57■□□□□ 0.56
TRAPPC1-207ENST00000575639 RRP1P56182 461 aaKnown RBP18.57■□□□□ 0.56
TRAPPC1-207ENST00000575639 EAPPQ56P03 285 aaPredicted RBP18.57■□□□□ 0.56
TRAPPC1-207ENST00000575639 C20orf194Q5TEA3 1177 aa18.57■□□□□ 0.56
TRAPPC1-207ENST00000575639 STRIP1Q5VSL9 837 aa18.57■□□□□ 0.56
TRAPPC1-207ENST00000575639 SMC1BQ8NDV3 1235 aa18.57■□□□□ 0.56
TRAPPC1-207ENST00000575639 SSH3Q8TE77 659 aa18.57■□□□□ 0.56
TRAPPC1-207ENST00000575639 FBXW7Q969H0 707 aa18.57■□□□□ 0.56
TRAPPC1-207ENST00000575639 CNOT7Q9UIV1 285 aaKnown RBP18.57■□□□□ 0.56
TRAPPC1-207ENST00000575639 PCNTO95613 3336 aa18.57■□□□□ 0.56
TRAPPC1-207ENST00000575639 LTBP1Q14766 1721 aa18.57■□□□□ 0.56
TRAPPC1-207ENST00000575639 IRS2Q9Y4H2 1338 aa18.56■□□□□ 0.56
TRAPPC1-207ENST00000575639 SLC5A1P13866 664 aa18.56■□□□□ 0.56
TRAPPC1-207ENST00000575639 FSTL1Q12841 308 aa18.56■□□□□ 0.56
TRAPPC1-207ENST00000575639 POLA2Q14181 598 aa18.56■□□□□ 0.56
TRAPPC1-207ENST00000575639 TTLL5Q6EMB2 1281 aa18.56■□□□□ 0.56
TRAPPC1-207ENST00000575639 RSBN1LQ6PCB5 846 aaPredicted RBP18.56■□□□□ 0.56
TRAPPC1-207ENST00000575639 AGBL3Q8NEM8 1001 aa18.56■□□□□ 0.56
TRAPPC1-207ENST00000575639 LPIN2Q92539 896 aa18.56■□□□□ 0.56
TRAPPC1-207ENST00000575639 ADARB2Q9NS39 739 aaKnown RBP18.56■□□□□ 0.56
TRAPPC1-207ENST00000575639 ZBTB40Q9NUA8 1239 aa18.56■□□□□ 0.56
TRAPPC1-207ENST00000575639 ZBTB12Q9Y330 459 aaPredicted RBP18.56■□□□□ 0.56
TRAPPC1-207ENST00000575639 CCDC88AQ3V6T2 1871 aa18.55■□□□□ 0.56
TRAPPC1-207ENST00000575639 IL1R1P14778 569 aa18.55■□□□□ 0.56
TRAPPC1-207ENST00000575639 CEP85Q6P2H3 762 aa18.55■□□□□ 0.56
TRAPPC1-207ENST00000575639 USP50Q70EL3 339 aaPredicted RBP18.55■□□□□ 0.56
TRAPPC1-207ENST00000575639 LDHDQ86WU2 507 aa18.55■□□□□ 0.56
TRAPPC1-207ENST00000575639 FAM84BQ96KN1 310 aaPredicted RBP18.55■□□□□ 0.56
TRAPPC1-207ENST00000575639 CLEC11AQ9Y240 323 aa18.55■□□□□ 0.56
TRAPPC1-207ENST00000575639 AKAP2Q9Y2D5 859 aa18.55■□□□□ 0.56
TRAPPC1-207ENST00000575639 MYO3BQ8WXR4 1341 aa18.54■□□□□ 0.56
TRAPPC1-207ENST00000575639 FGFR2P21802 821 aa18.54■□□□□ 0.56
TRAPPC1-207ENST00000575639 GYG1P46976 350 aa18.54■□□□□ 0.56
TRAPPC1-207ENST00000575639 GTF2IP78347 998 aa18.54■□□□□ 0.56
TRAPPC1-207ENST00000575639 OS9Q13438 667 aaPredicted RBP18.54■□□□□ 0.56
TRAPPC1-207ENST00000575639 ATP2B3Q16720 1220 aa18.54■□□□□ 0.56
TRAPPC1-207ENST00000575639 RPAP2Q8IXW5 612 aaPredicted RBP18.54■□□□□ 0.56
TRAPPC1-207ENST00000575639 MICALL2Q8IY33 904 aa18.54■□□□□ 0.56
TRAPPC1-207ENST00000575639 HMMRO75330 724 aa18.53■□□□□ 0.56
TRAPPC1-207ENST00000575639 FRAT2O75474 233 aaPredicted RBP18.53■□□□□ 0.56
TRAPPC1-207ENST00000575639 SURF6O75683 361 aaKnown RBP18.53■□□□□ 0.56
TRAPPC1-207ENST00000575639 SASH1O94885 1247 aa18.53■□□□□ 0.56
TRAPPC1-207ENST00000575639 DACT2Q5SW24 774 aa18.53■□□□□ 0.56
TRAPPC1-207ENST00000575639 CHADLQ6NUI6 762 aa18.53■□□□□ 0.56
TRAPPC1-207ENST00000575639 FBXO33Q7Z6M2 555 aa18.53■□□□□ 0.56
TRAPPC1-207ENST00000575639 TFCP2Q12800 502 aa18.52■□□□□ 0.56
TRAPPC1-207ENST00000575639 OGFOD1Q8N543 542 aa18.52■□□□□ 0.56
TRAPPC1-207ENST00000575639 TDRD7Q8NHU6 1098 aaKnown RBP18.52■□□□□ 0.56
TRAPPC1-207ENST00000575639 USP17L8P0C7I0 530 aa18.51■□□□□ 0.55
TRAPPC1-207ENST00000575639 MMP14P50281 582 aa18.51■□□□□ 0.55
TRAPPC1-207ENST00000575639 BCAMP50895 628 aa18.51■□□□□ 0.55
TRAPPC1-207ENST00000575639 GNL3LQ9NVN8 582 aaKnown RBP18.51■□□□□ 0.55
TRAPPC1-207ENST00000575639 PCDH10Q9P2E7 1040 aa18.51■□□□□ 0.55
TRAPPC1-207ENST00000575639 NOP58Q9Y2X3 529 aaKnown RBP18.51■□□□□ 0.55
TRAPPC1-207ENST00000575639 HSP90AB4PQ58FF6 505 aa18.5■□□□□ 0.55
TRAPPC1-207ENST00000575639 GMLQ99445 158 aa18.5■□□□□ 0.55
TRAPPC1-207ENST00000575639 POTEIP0CG38 1075 aa18.49■□□□□ 0.55
TRAPPC1-207ENST00000575639 POTEJP0CG39 1038 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms