RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 SCN9AQ15858 1988 aa18.88■□□□□ 0.61
LITAF-217ENST00000575426 SNAP23O00161 211 aa18.88■□□□□ 0.61
LITAF-217ENST00000575426 IL15P40933 162 aaPredicted RBP18.88■□□□□ 0.61
LITAF-217ENST00000575426 C15orf52Q6ZUT6 534 aaKnown RBP18.88■□□□□ 0.61
LITAF-217ENST00000575426 ZNF804AQ7Z570 1209 aa18.88■□□□□ 0.61
LITAF-217ENST00000575426 L3MBTL3Q96JM7 780 aaPredicted RBP18.88■□□□□ 0.61
LITAF-217ENST00000575426 PNMA6EA0A0J9YXQ4 647 aa18.87■□□□□ 0.61
LITAF-217ENST00000575426 G3BP1Q13283 466 aaKnown RBP eCLIP18.87■□□□□ 0.61
LITAF-217ENST00000575426 ATG9AQ7Z3C6 839 aa18.87■□□□□ 0.61
LITAF-217ENST00000575426 TXNRD3Q86VQ6 643 aa18.87■□□□□ 0.61
LITAF-217ENST00000575426 PSMD14O00487 310 aa18.86■□□□□ 0.61
LITAF-217ENST00000575426 KIF3CO14782 793 aa18.86■□□□□ 0.61
LITAF-217ENST00000575426 IFIT1P09914 478 aaKnown RBP18.86■□□□□ 0.61
LITAF-217ENST00000575426 PUM3Q15397 648 aaKnown RBP18.86■□□□□ 0.61
LITAF-217ENST00000575426 ZBTB40Q9NUA8 1239 aa18.86■□□□□ 0.61
LITAF-217ENST00000575426 HACL1Q9UJ83 578 aa18.86■□□□□ 0.61
LITAF-217ENST00000575426 KLRK1P26718 216 aa18.85■□□□□ 0.61
LITAF-217ENST00000575426 CAVIN4Q5BKX8 364 aa18.85■□□□□ 0.61
LITAF-217ENST00000575426 VPS37DQ86XT2 251 aa18.85■□□□□ 0.61
LITAF-217ENST00000575426 VGLL2Q8N8G2 317 aa18.85■□□□□ 0.61
LITAF-217ENST00000575426 SSH3Q8TE77 659 aa18.85■□□□□ 0.61
LITAF-217ENST00000575426 FBXW7Q969H0 707 aa18.85■□□□□ 0.61
LITAF-217ENST00000575426 CD209Q9NNX6 404 aa18.85■□□□□ 0.61
LITAF-217ENST00000575426 KCNQ5Q9NR82 932 aa18.85■□□□□ 0.61
LITAF-217ENST00000575426 MYH13Q9UKX3 1938 aa18.84■□□□□ 0.61
LITAF-217ENST00000575426 USP17L3A6NCW0 530 aa18.84■□□□□ 0.61
LITAF-217ENST00000575426 USP17L4A6NCW7 530 aa18.84■□□□□ 0.61
LITAF-217ENST00000575426 POTECB2RU33 542 aa18.84■□□□□ 0.61
LITAF-217ENST00000575426 SLC5A1P13866 664 aa18.84■□□□□ 0.61
LITAF-217ENST00000575426 HIBADHP31937 336 aaKnown RBP18.84■□□□□ 0.61
LITAF-217ENST00000575426 OS9Q13438 667 aaPredicted RBP18.84■□□□□ 0.61
LITAF-217ENST00000575426 POLA2Q14181 598 aa18.84■□□□□ 0.61
LITAF-217ENST00000575426 CEP85Q6P2H3 762 aa18.84■□□□□ 0.61
LITAF-217ENST00000575426 USP17L1Q7RTZ2 530 aa18.84■□□□□ 0.61
LITAF-217ENST00000575426 RPAP2Q8IXW5 612 aaPredicted RBP18.84■□□□□ 0.61
LITAF-217ENST00000575426 HMMRO75330 724 aa18.83■□□□□ 0.6
LITAF-217ENST00000575426 SURF6O75683 361 aaKnown RBP18.83■□□□□ 0.6
LITAF-217ENST00000575426 TOMM70O94826 608 aa18.83■□□□□ 0.6
LITAF-217ENST00000575426 VIL1P09327 827 aaKnown RBP18.83■□□□□ 0.6
LITAF-217ENST00000575426 RPS12P25398 132 aaKnown RBP18.83■□□□□ 0.6
LITAF-217ENST00000575426 GMPSP49915 693 aaPredicted RBP18.83■□□□□ 0.6
LITAF-217ENST00000575426 LPIN2Q92539 896 aa18.83■□□□□ 0.6
LITAF-217ENST00000575426 AKAP2Q9Y2D5 859 aa18.83■□□□□ 0.6
LITAF-217ENST00000575426 IRS2Q9Y4H2 1338 aa18.82■□□□□ 0.6
LITAF-217ENST00000575426 H7C1D1 291 aa18.82■□□□□ 0.6
LITAF-217ENST00000575426 FRAT2O75474 233 aaPredicted RBP18.82■□□□□ 0.6
LITAF-217ENST00000575426 EPHX2P34913 555 aa18.82■□□□□ 0.6
LITAF-217ENST00000575426 GYG1P46976 350 aa18.82■□□□□ 0.6
LITAF-217ENST00000575426 ATP2B3Q16720 1220 aa18.82■□□□□ 0.6
LITAF-217ENST00000575426 TTLL5Q6EMB2 1281 aa18.82■□□□□ 0.6
LITAF-217ENST00000575426 DPF2Q92785 391 aa18.82■□□□□ 0.6
LITAF-217ENST00000575426 TAF1DQ9H5J8 278 aaPredicted RBP18.82■□□□□ 0.6
LITAF-217ENST00000575426 FGFR2P21802 821 aa18.81■□□□□ 0.6
LITAF-217ENST00000575426 SCNN1DP51172 638 aa18.81■□□□□ 0.6
LITAF-217ENST00000575426 RSBN1LQ6PCB5 846 aaPredicted RBP18.81■□□□□ 0.6
LITAF-217ENST00000575426 PNMA8AQ86V59 439 aaPredicted RBP18.81■□□□□ 0.6
LITAF-217ENST00000575426 FAM84BQ96KN1 310 aaPredicted RBP18.81■□□□□ 0.6
LITAF-217ENST00000575426 GPRC5DQ9NZD1 345 aa18.81■□□□□ 0.6
LITAF-217ENST00000575426 CNOT7Q9UIV1 285 aaKnown RBP18.81■□□□□ 0.6
LITAF-217ENST00000575426 ZBTB12Q9Y330 459 aaPredicted RBP18.81■□□□□ 0.6
LITAF-217ENST00000575426 IL1R1P14778 569 aa18.8■□□□□ 0.6
LITAF-217ENST00000575426 EPS15P42566 896 aa18.8■□□□□ 0.6
LITAF-217ENST00000575426 GTF2IP78347 998 aa18.8■□□□□ 0.6
LITAF-217ENST00000575426 TFCP2Q12800 502 aa18.8■□□□□ 0.6
LITAF-217ENST00000575426 EAPPQ56P03 285 aaPredicted RBP18.8■□□□□ 0.6
LITAF-217ENST00000575426 STRIP1Q5VSL9 837 aa18.8■□□□□ 0.6
LITAF-217ENST00000575426 AGBL3Q8NEM8 1001 aa18.8■□□□□ 0.6
LITAF-217ENST00000575426 RBM46Q8TBY0 533 aaKnown RBP18.8■□□□□ 0.6
LITAF-217ENST00000575426 CLEC11AQ9Y240 323 aa18.8■□□□□ 0.6
LITAF-217ENST00000575426 SUPT16HQ9Y5B9 1047 aaKnown RBP18.8■□□□□ 0.6
LITAF-217ENST00000575426 MYO3BQ8WXR4 1341 aa18.79■□□□□ 0.6
LITAF-217ENST00000575426 HSP90AB4PQ58FF6 505 aa18.79■□□□□ 0.6
LITAF-217ENST00000575426 FBXO33Q7Z6M2 555 aa18.79■□□□□ 0.6
LITAF-217ENST00000575426 ADARB2Q9NS39 739 aaKnown RBP18.79■□□□□ 0.6
LITAF-217ENST00000575426 ARAP2Q8WZ64 1704 aa18.78■□□□□ 0.6
LITAF-217ENST00000575426 USP50Q70EL3 339 aaPredicted RBP18.78■□□□□ 0.6
LITAF-217ENST00000575426 MICALL2Q8IY33 904 aa18.78■□□□□ 0.6
LITAF-217ENST00000575426 TDRD7Q8NHU6 1098 aaKnown RBP18.78■□□□□ 0.6
LITAF-217ENST00000575426 NEUROD6Q96NK8 337 aa18.78■□□□□ 0.6
LITAF-217ENST00000575426 GNL3LQ9NVN8 582 aaKnown RBP18.78■□□□□ 0.6
LITAF-217ENST00000575426 NOP58Q9Y2X3 529 aaKnown RBP18.78■□□□□ 0.6
LITAF-217ENST00000575426 ZNF646O15015 1829 aaPredicted RBP18.78■□□□□ 0.6
LITAF-217ENST00000575426 SASH1O94885 1247 aa18.77■□□□□ 0.6
LITAF-217ENST00000575426 BCAMP50895 628 aa18.77■□□□□ 0.6
LITAF-217ENST00000575426 TIMM10P62072 90 aa18.77■□□□□ 0.6
LITAF-217ENST00000575426 DACT2Q5SW24 774 aa18.77■□□□□ 0.6
LITAF-217ENST00000575426 ERC1Q8IUD2 1116 aa18.77■□□□□ 0.6
LITAF-217ENST00000575426 SMC1BQ8NDV3 1235 aa18.77■□□□□ 0.6
LITAF-217ENST00000575426 CRBNQ96SW2 442 aa18.77■□□□□ 0.6
LITAF-217ENST00000575426 A0A1B0GUL7 405 aa18.76■□□□□ 0.59
LITAF-217ENST00000575426 C1QTNF8P60827 252 aa18.76■□□□□ 0.59
LITAF-217ENST00000575426 GORABQ5T7V8 394 aa18.76■□□□□ 0.59
LITAF-217ENST00000575426 LDHDQ86WU2 507 aa18.76■□□□□ 0.59
LITAF-217ENST00000575426 OGFOD1Q8N543 542 aa18.76■□□□□ 0.59
LITAF-217ENST00000575426 USP17L8P0C7I0 530 aa18.75■□□□□ 0.59
LITAF-217ENST00000575426 MMP14P50281 582 aa18.75■□□□□ 0.59
LITAF-217ENST00000575426 FSTL1Q12841 308 aa18.75■□□□□ 0.59
LITAF-217ENST00000575426 CHADLQ6NUI6 762 aa18.75■□□□□ 0.59
LITAF-217ENST00000575426 MXD3Q9BW11 206 aa18.75■□□□□ 0.59
LITAF-217ENST00000575426 HDAC9Q9UKV0 1011 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms