RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 POLA2Q14181 598 aa15.82■□□□□ 0.12
TRAPPC1-206ENST00000573989 PUM3Q15397 648 aaKnown RBP15.82■□□□□ 0.12
TRAPPC1-206ENST00000573989 CEP85Q6P2H3 762 aa15.82■□□□□ 0.12
TRAPPC1-206ENST00000573989 ATG9AQ7Z3C6 839 aa15.82■□□□□ 0.12
TRAPPC1-206ENST00000573989 ZNF541Q9H0D2 1346 aa15.82■□□□□ 0.12
TRAPPC1-206ENST00000573989 RAD17O75943 681 aa15.81■□□□□ 0.12
TRAPPC1-206ENST00000573989 VEGFAP15692 232 aaPredicted RBP15.81■□□□□ 0.12
TRAPPC1-206ENST00000573989 LMOD1P29536 600 aaPredicted RBP15.81■□□□□ 0.12
TRAPPC1-206ENST00000573989 CXCL9Q07325 125 aa15.81■□□□□ 0.12
TRAPPC1-206ENST00000573989 PSME4Q14997 1843 aa15.81■□□□□ 0.12
TRAPPC1-206ENST00000573989 CAVIN4Q5BKX8 364 aa15.81■□□□□ 0.12
TRAPPC1-206ENST00000573989 VPS37DQ86XT2 251 aa15.81■□□□□ 0.12
TRAPPC1-206ENST00000573989 VGLL2Q8N8G2 317 aa15.81■□□□□ 0.12
TRAPPC1-206ENST00000573989 AKAP2Q9Y2D5 859 aa15.81■□□□□ 0.12
TRAPPC1-206ENST00000573989 SURF6O75683 361 aaKnown RBP15.8■□□□□ 0.12
TRAPPC1-206ENST00000573989 SLC5A1P13866 664 aa15.8■□□□□ 0.12
TRAPPC1-206ENST00000573989 C16orf71Q8IYS4 520 aaPredicted RBP15.8■□□□□ 0.12
TRAPPC1-206ENST00000573989 LPIN2Q92539 896 aa15.8■□□□□ 0.12
TRAPPC1-206ENST00000573989 L3MBTL3Q96JM7 780 aaPredicted RBP15.8■□□□□ 0.12
TRAPPC1-206ENST00000573989 RRAGCQ9HB90 399 aa15.8■□□□□ 0.12
TRAPPC1-206ENST00000573989 SUPT16HQ9Y5B9 1047 aaKnown RBP15.8■□□□□ 0.12
TRAPPC1-206ENST00000573989 USP17L3A6NCW0 530 aa15.79■□□□□ 0.12
TRAPPC1-206ENST00000573989 USP17L4A6NCW7 530 aa15.79■□□□□ 0.12
TRAPPC1-206ENST00000573989 WTIPA6NIX2 430 aaPredicted RBP15.79■□□□□ 0.12
TRAPPC1-206ENST00000573989 YDJCA8MPS7 323 aa15.79■□□□□ 0.12
TRAPPC1-206ENST00000573989 SNAP23O00161 211 aa15.79■□□□□ 0.12
TRAPPC1-206ENST00000573989 AAMPQ13685 434 aa15.79■□□□□ 0.12
TRAPPC1-206ENST00000573989 ATP2B3Q16720 1220 aa15.79■□□□□ 0.12
TRAPPC1-206ENST00000573989 HSP90AB4PQ58FF6 505 aa15.79■□□□□ 0.12
TRAPPC1-206ENST00000573989 USP17L1Q7RTZ2 530 aa15.79■□□□□ 0.12
TRAPPC1-206ENST00000573989 TXNRD3Q86VQ6 643 aa15.79■□□□□ 0.12
TRAPPC1-206ENST00000573989 SCN9AQ15858 1988 aa15.78■□□□□ 0.12
TRAPPC1-206ENST00000573989 PSMD14O00487 310 aa15.78■□□□□ 0.12
TRAPPC1-206ENST00000573989 RPS12P25398 132 aaKnown RBP15.78■□□□□ 0.12
TRAPPC1-206ENST00000573989 HIBADHP31937 336 aaKnown RBP15.78■□□□□ 0.12
TRAPPC1-206ENST00000573989 ERC1Q8IUD2 1116 aa15.78■□□□□ 0.12
TRAPPC1-206ENST00000573989 CD209Q9NNX6 404 aa15.78■□□□□ 0.12
TRAPPC1-206ENST00000573989 NMRK2Q9NPI5 230 aa15.78■□□□□ 0.12
TRAPPC1-206ENST00000573989 HACL1Q9UJ83 578 aa15.78■□□□□ 0.12
TRAPPC1-206ENST00000573989 NOP58Q9Y2X3 529 aaKnown RBP15.78■□□□□ 0.12
TRAPPC1-206ENST00000573989 IRS2Q9Y4H2 1338 aa15.77■□□□□ 0.12
TRAPPC1-206ENST00000573989 MYH13Q9UKX3 1938 aa15.77■□□□□ 0.12
TRAPPC1-206ENST00000573989 FGFR2P21802 821 aa15.77■□□□□ 0.12
TRAPPC1-206ENST00000573989 KLRK1P26718 216 aa15.77■□□□□ 0.12
TRAPPC1-206ENST00000573989 STRIP1Q5VSL9 837 aa15.77■□□□□ 0.12
TRAPPC1-206ENST00000573989 FBXW7Q969H0 707 aa15.77■□□□□ 0.12
TRAPPC1-206ENST00000573989 MYO3BQ8WXR4 1341 aa15.76■□□□□ 0.11
TRAPPC1-206ENST00000573989 FRAT2O75474 233 aaPredicted RBP15.76■□□□□ 0.11
TRAPPC1-206ENST00000573989 VIL1P09327 827 aaKnown RBP15.76■□□□□ 0.11
TRAPPC1-206ENST00000573989 IL1R1P14778 569 aa15.76■□□□□ 0.11
TRAPPC1-206ENST00000573989 TFCP2Q12800 502 aa15.76■□□□□ 0.11
TRAPPC1-206ENST00000573989 TTLL5Q6EMB2 1281 aa15.76■□□□□ 0.11
TRAPPC1-206ENST00000573989 AGBL3Q8NEM8 1001 aa15.76■□□□□ 0.11
TRAPPC1-206ENST00000573989 DPF2Q92785 391 aa15.76■□□□□ 0.11
TRAPPC1-206ENST00000573989 FAM84BQ96KN1 310 aaPredicted RBP15.76■□□□□ 0.11
TRAPPC1-206ENST00000573989 CRBNQ96SW2 442 aa15.76■□□□□ 0.11
TRAPPC1-206ENST00000573989 GNL3LQ9NVN8 582 aaKnown RBP15.76■□□□□ 0.11
TRAPPC1-206ENST00000573989 GYG1P46976 350 aa15.75■□□□□ 0.11
TRAPPC1-206ENST00000573989 GMPSP49915 693 aaPredicted RBP15.75■□□□□ 0.11
TRAPPC1-206ENST00000573989 RSBN1LQ6PCB5 846 aaPredicted RBP15.75■□□□□ 0.11
TRAPPC1-206ENST00000573989 FBXO33Q7Z6M2 555 aa15.75■□□□□ 0.11
TRAPPC1-206ENST00000573989 PNMA8AQ86V59 439 aaPredicted RBP15.75■□□□□ 0.11
TRAPPC1-206ENST00000573989 KCNQ5Q9NR82 932 aa15.75■□□□□ 0.11
TRAPPC1-206ENST00000573989 ARAP2Q8WZ64 1704 aa15.74■□□□□ 0.11
TRAPPC1-206ENST00000573989 H7C1D1 291 aa15.74■□□□□ 0.11
TRAPPC1-206ENST00000573989 KIF3CO14782 793 aa15.74■□□□□ 0.11
TRAPPC1-206ENST00000573989 SASH1O94885 1247 aa15.74■□□□□ 0.11
TRAPPC1-206ENST00000573989 EPHX2P34913 555 aa15.74■□□□□ 0.11
TRAPPC1-206ENST00000573989 MMP14P50281 582 aa15.74■□□□□ 0.11
TRAPPC1-206ENST00000573989 SCNN1DP51172 638 aa15.74■□□□□ 0.11
TRAPPC1-206ENST00000573989 GTF2IP78347 998 aa15.74■□□□□ 0.11
TRAPPC1-206ENST00000573989 NEUROD6Q96NK8 337 aa15.74■□□□□ 0.11
TRAPPC1-206ENST00000573989 GPR108Q9NPR9 543 aa15.74■□□□□ 0.11
TRAPPC1-206ENST00000573989 GPRC5DQ9NZD1 345 aa15.74■□□□□ 0.11
TRAPPC1-206ENST00000573989 A0A1B0GUL7 405 aa15.73■□□□□ 0.11
TRAPPC1-206ENST00000573989 POTECB2RU33 542 aa15.73■□□□□ 0.11
TRAPPC1-206ENST00000573989 RAB11FIP3O75154 756 aa15.73■□□□□ 0.11
TRAPPC1-206ENST00000573989 TOMM70O94826 608 aa15.73■□□□□ 0.11
TRAPPC1-206ENST00000573989 GORABQ5T7V8 394 aa15.73■□□□□ 0.11
TRAPPC1-206ENST00000573989 TDRD7Q8NHU6 1098 aaKnown RBP15.73■□□□□ 0.11
TRAPPC1-206ENST00000573989 TAF1DQ9H5J8 278 aaPredicted RBP15.73■□□□□ 0.11
TRAPPC1-206ENST00000573989 ADARB2Q9NS39 739 aaKnown RBP15.73■□□□□ 0.11
TRAPPC1-206ENST00000573989 CNOT7Q9UIV1 285 aaKnown RBP15.73■□□□□ 0.11
TRAPPC1-206ENST00000573989 EXOC6BQ9Y2D4 811 aa15.73■□□□□ 0.11
TRAPPC1-206ENST00000573989 ZNF609O15014 1411 aa15.73■□□□□ 0.11
TRAPPC1-206ENST00000573989 BCAMP50895 628 aa15.72■□□□□ 0.11
TRAPPC1-206ENST00000573989 TIMM10P62072 90 aa15.72■□□□□ 0.11
TRAPPC1-206ENST00000573989 USP50Q70EL3 339 aaPredicted RBP15.72■□□□□ 0.11
TRAPPC1-206ENST00000573989 SIRT2Q8IXJ6 389 aa15.72■□□□□ 0.11
TRAPPC1-206ENST00000573989 OGFOD1Q8N543 542 aa15.72■□□□□ 0.11
TRAPPC1-206ENST00000573989 KIF1BPQ96EK5 621 aa15.72■□□□□ 0.11
TRAPPC1-206ENST00000573989 ZBTB12Q9Y330 459 aaPredicted RBP15.72■□□□□ 0.11
TRAPPC1-206ENST00000573989 FAM205AQ6ZU69 1335 aa15.71■□□□□ 0.11
TRAPPC1-206ENST00000573989 EPS15P42566 896 aa15.71■□□□□ 0.11
TRAPPC1-206ENST00000573989 FKBP1AP62942 108 aaKnown RBP15.71■□□□□ 0.11
TRAPPC1-206ENST00000573989 EAPPQ56P03 285 aaPredicted RBP15.71■□□□□ 0.11
TRAPPC1-206ENST00000573989 TNNI3KQ59H18 835 aa15.71■□□□□ 0.11
TRAPPC1-206ENST00000573989 DACT2Q5SW24 774 aa15.71■□□□□ 0.11
TRAPPC1-206ENST00000573989 MICALL2Q8IY33 904 aa15.71■□□□□ 0.11
TRAPPC1-206ENST00000573989 TBC1D22AQ8WUA7 517 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms