RNA–Protein interactions for RNA: ENST00000571976.1

LITAF-210, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-210ENST00000571976 ATP8B2P98198 1209 aa20.12■□□□□ 0.81
LITAF-210ENST00000571976 C20orf194Q5TEA3 1177 aa20.12■□□□□ 0.81
LITAF-210ENST00000571976 ATG9AQ7Z3C6 839 aa20.12■□□□□ 0.81
LITAF-210ENST00000571976 VGLL2Q8N8G2 317 aa20.12■□□□□ 0.81
LITAF-210ENST00000571976 C1orf115Q9H7X2 142 aa20.12■□□□□ 0.81
LITAF-210ENST00000571976 KCNQ5Q9NR82 932 aa20.12■□□□□ 0.81
LITAF-210ENST00000571976 HACL1Q9UJ83 578 aa20.12■□□□□ 0.81
LITAF-210ENST00000571976 PA2G4Q9UQ80 394 aaKnown RBP20.12■□□□□ 0.81
LITAF-210ENST00000571976 PNMA6EA0A0J9YXQ4 647 aa20.11■□□□□ 0.81
LITAF-210ENST00000571976 PSMD14O00487 310 aa20.11■□□□□ 0.81
LITAF-210ENST00000571976 LMOD1P29536 600 aaPredicted RBP20.11■□□□□ 0.81
LITAF-210ENST00000571976 IL15P40933 162 aaPredicted RBP20.11■□□□□ 0.81
LITAF-210ENST00000571976 SCN4AP35499 1836 aa20.11■□□□□ 0.81
LITAF-210ENST00000571976 VIL1P09327 827 aaKnown RBP20.1■□□□□ 0.81
LITAF-210ENST00000571976 SCNN1DP51172 638 aa20.1■□□□□ 0.81
LITAF-210ENST00000571976 ZNF804AQ7Z570 1209 aa20.1■□□□□ 0.81
LITAF-210ENST00000571976 TAF1DQ9H5J8 278 aaPredicted RBP20.1■□□□□ 0.81
LITAF-210ENST00000571976 CEP126Q9P2H0 1117 aa20.1■□□□□ 0.81
LITAF-210ENST00000571976 EPHX2P34913 555 aa20.09■□□□□ 0.81
LITAF-210ENST00000571976 GMPSP49915 693 aaPredicted RBP20.09■□□□□ 0.81
LITAF-210ENST00000571976 RRP1P56182 461 aaKnown RBP20.09■□□□□ 0.81
LITAF-210ENST00000571976 POLA2Q14181 598 aa20.09■□□□□ 0.81
LITAF-210ENST00000571976 PUM3Q15397 648 aaKnown RBP20.09■□□□□ 0.81
LITAF-210ENST00000571976 SSH3Q8TE77 659 aa20.09■□□□□ 0.81
LITAF-210ENST00000571976 CD209Q9NNX6 404 aa20.09■□□□□ 0.81
LITAF-210ENST00000571976 ZBTB40Q9NUA8 1239 aa20.09■□□□□ 0.81
LITAF-210ENST00000571976 GPRC5DQ9NZD1 345 aa20.09■□□□□ 0.81
LITAF-210ENST00000571976 USP17L3A6NCW0 530 aa20.08■□□□□ 0.81
LITAF-210ENST00000571976 USP17L4A6NCW7 530 aa20.08■□□□□ 0.81
LITAF-210ENST00000571976 RPS12P25398 132 aaKnown RBP20.08■□□□□ 0.81
LITAF-210ENST00000571976 USP17L1Q7RTZ2 530 aa20.08■□□□□ 0.81
LITAF-210ENST00000571976 RBM46Q8TBY0 533 aaKnown RBP20.08■□□□□ 0.81
LITAF-210ENST00000571976 DPF2Q92785 391 aa20.08■□□□□ 0.81
LITAF-210ENST00000571976 ZBTB12Q9Y330 459 aaPredicted RBP20.08■□□□□ 0.81
LITAF-210ENST00000571976 IFIT1P09914 478 aaKnown RBP20.07■□□□□ 0.8
LITAF-210ENST00000571976 FGFR2P21802 821 aa20.07■□□□□ 0.8
LITAF-210ENST00000571976 EPS15P42566 896 aa20.07■□□□□ 0.8
LITAF-210ENST00000571976 C1QTNF8P60827 252 aa20.07■□□□□ 0.8
LITAF-210ENST00000571976 CEP85Q6P2H3 762 aa20.07■□□□□ 0.8
LITAF-210ENST00000571976 PNMA8AQ86V59 439 aaPredicted RBP20.07■□□□□ 0.8
LITAF-210ENST00000571976 SCN9AQ15858 1988 aa20.06■□□□□ 0.8
LITAF-210ENST00000571976 IL1R1P14778 569 aa20.06■□□□□ 0.8
LITAF-210ENST00000571976 HIBADHP31937 336 aaKnown RBP20.06■□□□□ 0.8
LITAF-210ENST00000571976 G3BP1Q13283 466 aaKnown RBP eCLIP20.06■□□□□ 0.8
LITAF-210ENST00000571976 CAVIN4Q5BKX8 364 aa20.06■□□□□ 0.8
LITAF-210ENST00000571976 STRIP1Q5VSL9 837 aa20.06■□□□□ 0.8
LITAF-210ENST00000571976 RSBN1LQ6PCB5 846 aaPredicted RBP20.06■□□□□ 0.8
LITAF-210ENST00000571976 LPIN2Q92539 896 aa20.06■□□□□ 0.8
LITAF-210ENST00000571976 FAM84BQ96KN1 310 aaPredicted RBP20.06■□□□□ 0.8
LITAF-210ENST00000571976 SLC5A1P13866 664 aa20.05■□□□□ 0.8
LITAF-210ENST00000571976 GYG1P46976 350 aa20.05■□□□□ 0.8
LITAF-210ENST00000571976 TTLL5Q6EMB2 1281 aa20.05■□□□□ 0.8
LITAF-210ENST00000571976 RPAP2Q8IXW5 612 aaPredicted RBP20.05■□□□□ 0.8
LITAF-210ENST00000571976 AGBL3Q8NEM8 1001 aa20.05■□□□□ 0.8
LITAF-210ENST00000571976 ADARB2Q9NS39 739 aaKnown RBP20.05■□□□□ 0.8
LITAF-210ENST00000571976 CNOT7Q9UIV1 285 aaKnown RBP20.05■□□□□ 0.8
LITAF-210ENST00000571976 ZNF609O15014 1411 aa20.04■□□□□ 0.8
LITAF-210ENST00000571976 H7C1D1 291 aa20.04■□□□□ 0.8
LITAF-210ENST00000571976 GTF2IP78347 998 aa20.04■□□□□ 0.8
LITAF-210ENST00000571976 ATP2B3Q16720 1220 aa20.04■□□□□ 0.8
LITAF-210ENST00000571976 DACT2Q5SW24 774 aa20.04■□□□□ 0.8
LITAF-210ENST00000571976 USP50Q70EL3 339 aaPredicted RBP20.04■□□□□ 0.8
LITAF-210ENST00000571976 FBXO33Q7Z6M2 555 aa20.04■□□□□ 0.8
LITAF-210ENST00000571976 VPS37DQ86XT2 251 aa20.04■□□□□ 0.8
LITAF-210ENST00000571976 SMC1BQ8NDV3 1235 aa20.04■□□□□ 0.8
LITAF-210ENST00000571976 PSME4Q14997 1843 aa20.04■□□□□ 0.8
LITAF-210ENST00000571976 SURF6O75683 361 aaKnown RBP20.03■□□□□ 0.8
LITAF-210ENST00000571976 FSTL1Q12841 308 aa20.03■□□□□ 0.8
LITAF-210ENST00000571976 EAPPQ56P03 285 aaPredicted RBP20.03■□□□□ 0.8
LITAF-210ENST00000571976 LDHDQ86WU2 507 aa20.03■□□□□ 0.8
LITAF-210ENST00000571976 MICALL2Q8IY33 904 aa20.03■□□□□ 0.8
LITAF-210ENST00000571976 TDRD7Q8NHU6 1098 aaKnown RBP20.03■□□□□ 0.8
LITAF-210ENST00000571976 FBXW7Q969H0 707 aa20.03■□□□□ 0.8
LITAF-210ENST00000571976 AKAP2Q9Y2D5 859 aa20.03■□□□□ 0.8
LITAF-210ENST00000571976 MYO3BQ8WXR4 1341 aa20.02■□□□□ 0.8
LITAF-210ENST00000571976 SASH1O94885 1247 aa20.02■□□□□ 0.8
LITAF-210ENST00000571976 TFCP2Q12800 502 aa20.02■□□□□ 0.8
LITAF-210ENST00000571976 GMLQ99445 158 aa20.02■□□□□ 0.8
LITAF-210ENST00000571976 NOP58Q9Y2X3 529 aaKnown RBP20.02■□□□□ 0.8
LITAF-210ENST00000571976 POTEIP0CG38 1075 aa20.01■□□□□ 0.79
LITAF-210ENST00000571976 POTEJP0CG39 1038 aa20.01■□□□□ 0.79
LITAF-210ENST00000571976 CHADLQ6NUI6 762 aa20.01■□□□□ 0.79
LITAF-210ENST00000571976 CLEC11AQ9Y240 323 aa20.01■□□□□ 0.79
LITAF-210ENST00000571976 HMMRO75330 724 aa20■□□□□ 0.79
LITAF-210ENST00000571976 USP17L8P0C7I0 530 aa20■□□□□ 0.79
LITAF-210ENST00000571976 BCAMP50895 628 aa20■□□□□ 0.79
LITAF-210ENST00000571976 OS9Q13438 667 aaPredicted RBP20■□□□□ 0.79
LITAF-210ENST00000571976 FAM205AQ6ZU69 1335 aa20■□□□□ 0.79
LITAF-210ENST00000571976 SHTN1A0MZ66 631 aa19.99■□□□□ 0.79
LITAF-210ENST00000571976 FRAT2O75474 233 aaPredicted RBP19.99■□□□□ 0.79
LITAF-210ENST00000571976 MMP14P50281 582 aa19.99■□□□□ 0.79
LITAF-210ENST00000571976 ZNF280AP59817 542 aaPredicted RBP19.99■□□□□ 0.79
LITAF-210ENST00000571976 TIMM10P62072 90 aa19.99■□□□□ 0.79
LITAF-210ENST00000571976 FKBP1AP62942 108 aaKnown RBP19.99■□□□□ 0.79
LITAF-210ENST00000571976 MXD3Q9BW11 206 aa19.99■□□□□ 0.79
LITAF-210ENST00000571976 A0A1B0GUL7 405 aa19.98■□□□□ 0.79
LITAF-210ENST00000571976 SIRT2Q8IXJ6 389 aa19.98■□□□□ 0.79
LITAF-210ENST00000571976 OGFOD1Q8N543 542 aa19.98■□□□□ 0.79
LITAF-210ENST00000571976 GPR108Q9NPR9 543 aa19.98■□□□□ 0.79
LITAF-210ENST00000571976 HSP90AB4PQ58FF6 505 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms