RNA–Protein interactions for RNA: ENST00000571064.5

UBFD1-210, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 794 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-210ENST00000571064 KIF16BQ96L93 1317 aa27.21■■□□□ 1.95
UBFD1-210ENST00000571064 TRIM28Q13263 835 aaKnown RBP27.21■■□□□ 1.95
UBFD1-210ENST00000571064 RASAL3Q86YV0 1011 aa27.21■■□□□ 1.95
UBFD1-210ENST00000571064 EYA3Q99504 573 aa27.21■■□□□ 1.95
UBFD1-210ENST00000571064 VIL1P09327 827 aaKnown RBP27.2■■□□□ 1.94
UBFD1-210ENST00000571064 TBC1D16Q8TBP0 767 aa27.2■■□□□ 1.94
UBFD1-210ENST00000571064 ARHGAP45Q92619 1136 aa27.2■■□□□ 1.94
UBFD1-210ENST00000571064 FRAT1Q92837 279 aaPredicted RBP27.2■■□□□ 1.94
UBFD1-210ENST00000571064 HPS5Q9UPZ3 1129 aa27.2■■□□□ 1.94
UBFD1-210ENST00000571064 SCN9AQ15858 1988 aa27.19■■□□□ 1.94
UBFD1-210ENST00000571064 CWF19L2Q2TBE0 894 aaKnown RBP27.19■■□□□ 1.94
UBFD1-210ENST00000571064 RTL5Q5HYW3 569 aaPredicted RBP27.19■■□□□ 1.94
UBFD1-210ENST00000571064 BEND3Q5T5X7 828 aa27.19■■□□□ 1.94
UBFD1-210ENST00000571064 NEURL1BA8MQ27 555 aa27.18■■□□□ 1.94
UBFD1-210ENST00000571064 TRIM27P14373 513 aa27.17■■□□□ 1.94
UBFD1-210ENST00000571064 SCARF1Q14162 830 aa27.17■■□□□ 1.94
UBFD1-210ENST00000571064 ANGEL2Q5VTE6 544 aaKnown RBP27.17■■□□□ 1.94
UBFD1-210ENST00000571064 SLC4A10Q6U841 1118 aa27.17■■□□□ 1.94
UBFD1-210ENST00000571064 API5Q9BZZ5 524 aaKnown RBP27.17■■□□□ 1.94
UBFD1-210ENST00000571064 ZC3H12CQ9C0D7 883 aaKnown RBP27.17■■□□□ 1.94
UBFD1-210ENST00000571064 NEXNQ0ZGT2 675 aa27.16■■□□□ 1.94
UBFD1-210ENST00000571064 ATF7IPQ6VMQ6 1270 aa27.16■■□□□ 1.94
UBFD1-210ENST00000571064 REM2Q8IYK8 340 aaPredicted RBP27.16■■□□□ 1.94
UBFD1-210ENST00000571064 CCDC191Q8NCU4 936 aa27.16■■□□□ 1.94
UBFD1-210ENST00000571064 LINS1Q8NG48 757 aa27.16■■□□□ 1.94
UBFD1-210ENST00000571064 IPO8O15397 1037 aaKnown RBP27.15■■□□□ 1.94
UBFD1-210ENST00000571064 RPS8P62241 208 aaKnown RBP27.15■■□□□ 1.94
UBFD1-210ENST00000571064 ZKSCAN2Q63HK3 967 aa27.15■■□□□ 1.94
UBFD1-210ENST00000571064 MOB2Q70IA6 237 aa27.15■■□□□ 1.94
UBFD1-210ENST00000571064 ZNF280AP59817 542 aaPredicted RBP27.14■■□□□ 1.94
UBFD1-210ENST00000571064 CWC25Q9NXE8 425 aaPredicted RBP27.14■■□□□ 1.94
UBFD1-210ENST00000571064 G3V3G9 751 aa27.13■■□□□ 1.93
UBFD1-210ENST00000571064 TBC1D8O95759 1140 aa27.13■■□□□ 1.93
UBFD1-210ENST00000571064 DCAF8Q5TAQ9 597 aa27.13■■□□□ 1.93
UBFD1-210ENST00000571064 ZNF296Q8WUU4 475 aaPredicted RBP27.13■■□□□ 1.93
UBFD1-210ENST00000571064 HDAC9Q9UKV0 1011 aa27.13■■□□□ 1.93
UBFD1-210ENST00000571064 SCAF8Q9UPN6 1271 aaKnown RBP27.13■■□□□ 1.93
UBFD1-210ENST00000571064 IRS4O14654 1257 aaPredicted RBP27.12■■□□□ 1.93
UBFD1-210ENST00000571064 PLIN1O60240 522 aa27.12■■□□□ 1.93
UBFD1-210ENST00000571064 UFL1O94874 794 aa27.12■■□□□ 1.93
UBFD1-210ENST00000571064 GCKRQ14397 625 aa27.12■■□□□ 1.93
UBFD1-210ENST00000571064 JARID2Q92833 1246 aaPredicted RBP27.12■■□□□ 1.93
UBFD1-210ENST00000571064 FKBP1BP68106 108 aa27.11■■□□□ 1.93
UBFD1-210ENST00000571064 PKN2Q16513 984 aaKnown RBP27.11■■□□□ 1.93
UBFD1-210ENST00000571064 RSBN1LQ6PCB5 846 aaPredicted RBP27.11■■□□□ 1.93
UBFD1-210ENST00000571064 CLUAP1Q96AJ1 413 aa27.11■■□□□ 1.93
UBFD1-210ENST00000571064 SRCIN1Q9C0H9 1055 aa27.11■■□□□ 1.93
UBFD1-210ENST00000571064 SEC31BQ9NQW1 1179 aa27.11■■□□□ 1.93
UBFD1-210ENST00000571064 PODXL2Q9NZ53 605 aa27.11■■□□□ 1.93
UBFD1-210ENST00000571064 PAPPA2Q9BXP8 1791 aa27.11■■□□□ 1.93
UBFD1-210ENST00000571064 AGBL3Q8NEM8 1001 aa27.1■■□□□ 1.93
UBFD1-210ENST00000571064 ANKIB1Q9P2G1 1089 aa27.1■■□□□ 1.93
UBFD1-210ENST00000571064 UBE2Q2LH0YL09 131 aa27.09■■□□□ 1.93
UBFD1-210ENST00000571064 ALDH1L1O75891 902 aa27.09■■□□□ 1.93
UBFD1-210ENST00000571064 RLBP1P12271 317 aa27.09■■□□□ 1.93
UBFD1-210ENST00000571064 GGA1Q9UJY5 639 aa27.09■■□□□ 1.93
UBFD1-210ENST00000571064 H7C1W4 665 aa27.08■■□□□ 1.93
UBFD1-210ENST00000571064 PCCAP05165 728 aaPredicted RBP27.08■■□□□ 1.93
UBFD1-210ENST00000571064 CASP7P55210 303 aa27.08■■□□□ 1.93
UBFD1-210ENST00000571064 PRAMEF18Q5VWM3 479 aa27.08■■□□□ 1.93
UBFD1-210ENST00000571064 INTS3Q68E01 1043 aaKnown RBP27.08■■□□□ 1.93
UBFD1-210ENST00000571064 ZBTB38Q8NAP3 1195 aaPredicted RBP27.08■■□□□ 1.93
UBFD1-210ENST00000571064 MYOZ2Q9NPC6 264 aa27.08■■□□□ 1.93
UBFD1-210ENST00000571064 GMLQ99445 158 aa27.07■■□□□ 1.92
UBFD1-210ENST00000571064 ZNF609O15014 1411 aa27.07■■□□□ 1.92
UBFD1-210ENST00000571064 USP17L8P0C7I0 530 aa27.06■■□□□ 1.92
UBFD1-210ENST00000571064 CCT4P50991 539 aaKnown RBP27.06■■□□□ 1.92
UBFD1-210ENST00000571064 TMEM57Q8N5G2 664 aa27.06■■□□□ 1.92
UBFD1-210ENST00000571064 PITPNM2Q9BZ72 1349 aa27.06■■□□□ 1.92
UBFD1-210ENST00000571064 DZIP1LQ8IYY4 767 aaKnown RBP27.05■■□□□ 1.92
UBFD1-210ENST00000571064 PANK1Q8TE04 598 aa27.05■■□□□ 1.92
UBFD1-210ENST00000571064 GPR25O00155 361 aa27.04■■□□□ 1.92
UBFD1-210ENST00000571064 MKRN3Q13064 507 aaKnown RBP27.04■■□□□ 1.92
UBFD1-210ENST00000571064 GRM8O00222 908 aa27.03■■□□□ 1.92
UBFD1-210ENST00000571064 TM4SF4P48230 202 aa27.03■■□□□ 1.92
UBFD1-210ENST00000571064 UBE3BQ7Z3V4 1068 aa27.03■■□□□ 1.92
UBFD1-210ENST00000571064 USP44Q9H0E7 712 aa27.03■■□□□ 1.92
UBFD1-210ENST00000571064 RRP1P56182 461 aaKnown RBP27.02■■□□□ 1.92
UBFD1-210ENST00000571064 TTLL12Q14166 644 aaPredicted RBP27.02■■□□□ 1.92
UBFD1-210ENST00000571064 NBPF9Q3BBW0 867 aa27.02■■□□□ 1.92
UBFD1-210ENST00000571064 C20orf194Q5TEA3 1177 aa27.02■■□□□ 1.92
UBFD1-210ENST00000571064 FBXO46Q6PJ61 603 aaPredicted RBP27.02■■□□□ 1.92
UBFD1-210ENST00000571064 PSME4Q14997 1843 aa27.02■■□□□ 1.92
UBFD1-210ENST00000571064 UTYO14607 1347 aa27.01■■□□□ 1.91
UBFD1-210ENST00000571064 USP17L3A6NCW0 530 aa27.01■■□□□ 1.91
UBFD1-210ENST00000571064 USP17L4A6NCW7 530 aa27.01■■□□□ 1.91
UBFD1-210ENST00000571064 NBPF7P0C2Y1 421 aaPredicted RBP27.01■■□□□ 1.91
UBFD1-210ENST00000571064 USP17L1Q7RTZ2 530 aa27.01■■□□□ 1.91
UBFD1-210ENST00000571064 CCDC85AQ96PX6 553 aaPredicted RBP27.01■■□□□ 1.91
UBFD1-210ENST00000571064 FTSJ3Q8IY81 847 aaKnown RBP27■■□□□ 1.91
UBFD1-210ENST00000571064 R3HDMLQ9H3Y0 253 aa27■■□□□ 1.91
UBFD1-210ENST00000571064 C9orf78Q9NZ63 289 aaPredicted RBP27■■□□□ 1.91
UBFD1-210ENST00000571064 WTIPA6NIX2 430 aaPredicted RBP26.99■■□□□ 1.91
UBFD1-210ENST00000571064 NOM1Q5C9Z4 860 aaKnown RBP26.99■■□□□ 1.91
UBFD1-210ENST00000571064 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.99■■□□□ 1.91
UBFD1-210ENST00000571064 CCDC152Q4G0S7 254 aa26.98■■□□□ 1.91
UBFD1-210ENST00000571064 PODNQ7Z5L7 613 aa26.98■■□□□ 1.91
UBFD1-210ENST00000571064 MXD3Q9BW11 206 aa26.98■■□□□ 1.91
UBFD1-210ENST00000571064 XDHP47989 1333 aa26.97■■□□□ 1.91
UBFD1-210ENST00000571064 KAZALD1Q96I82 304 aa26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms