RNA–Protein interactions for RNA: ENST00000562914.1

HERPUD1-205, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-205ENST00000562914 PRKRIP1Q9H875 184 aaPredicted RBP20.25■□□□□ 0.83
HERPUD1-205ENST00000562914 MINPP1Q9UNW1 487 aa20.25■□□□□ 0.83
HERPUD1-205ENST00000562914 NOM1Q5C9Z4 860 aaKnown RBP20.24■□□□□ 0.83
HERPUD1-205ENST00000562914 STK31Q9BXU1 1019 aa20.24■□□□□ 0.83
HERPUD1-205ENST00000562914 PCDH10Q9P2E7 1040 aa20.24■□□□□ 0.83
HERPUD1-205ENST00000562914 LEMD3Q9Y2U8 911 aa20.24■□□□□ 0.83
HERPUD1-205ENST00000562914 CCT4P50991 539 aaKnown RBP20.23■□□□□ 0.83
HERPUD1-205ENST00000562914 DACT2Q5SW24 774 aa20.23■□□□□ 0.83
HERPUD1-205ENST00000562914 PI4KAP2A4QPH2 592 aa20.22■□□□□ 0.83
HERPUD1-205ENST00000562914 IGKV5-2P06315 115 aa20.22■□□□□ 0.83
HERPUD1-205ENST00000562914 PI4KAP1Q8N8J0 262 aa20.22■□□□□ 0.83
HERPUD1-205ENST00000562914 JARID2Q92833 1246 aaPredicted RBP20.22■□□□□ 0.83
HERPUD1-205ENST00000562914 WNT10BO00744 389 aa20.21■□□□□ 0.83
HERPUD1-205ENST00000562914 IGHMBP2P38935 993 aaKnown RBP20.21■□□□□ 0.83
HERPUD1-205ENST00000562914 TM4SF4P48230 202 aa20.21■□□□□ 0.83
HERPUD1-205ENST00000562914 NBPF9Q3BBW0 867 aa20.21■□□□□ 0.83
HERPUD1-205ENST00000562914 ANKRD2Q9GZV1 360 aa20.21■□□□□ 0.83
HERPUD1-205ENST00000562914 GREM2Q9H772 168 aa20.21■□□□□ 0.83
HERPUD1-205ENST00000562914 MYH3P11055 1940 aa20.2■□□□□ 0.82
HERPUD1-205ENST00000562914 SREBF2Q12772 1141 aa20.2■□□□□ 0.82
HERPUD1-205ENST00000562914 APOBEC3FQ8IUX4 373 aaKnown RBP20.2■□□□□ 0.82
HERPUD1-205ENST00000562914 HDAC9Q9UKV0 1011 aa20.2■□□□□ 0.82
HERPUD1-205ENST00000562914 NEURL1BA8MQ27 555 aa20.19■□□□□ 0.82
HERPUD1-205ENST00000562914 UBE2Q2LH0YL09 131 aa20.19■□□□□ 0.82
HERPUD1-205ENST00000562914 SOX10P56693 466 aa20.19■□□□□ 0.82
HERPUD1-205ENST00000562914 TTLL12Q14166 644 aaPredicted RBP20.19■□□□□ 0.82
HERPUD1-205ENST00000562914 ARMC9Q7Z3E5 817 aa20.19■□□□□ 0.82
HERPUD1-205ENST00000562914 PLA2G12BQ9BX93 195 aa20.19■□□□□ 0.82
HERPUD1-205ENST00000562914 CFHR5Q9BXR6 569 aa20.19■□□□□ 0.82
HERPUD1-205ENST00000562914 H7C1W4 665 aa20.18■□□□□ 0.82
HERPUD1-205ENST00000562914 COL1A1P02452 1464 aaPredicted RBP20.18■□□□□ 0.82
HERPUD1-205ENST00000562914 CCDC27Q2M243 656 aa20.17■□□□□ 0.82
HERPUD1-205ENST00000562914 TTLL5Q6EMB2 1281 aa20.17■□□□□ 0.82
HERPUD1-205ENST00000562914 TSPYL6Q8N831 410 aa20.17■□□□□ 0.82
HERPUD1-205ENST00000562914 ZNF296Q8WUU4 475 aaPredicted RBP20.17■□□□□ 0.82
HERPUD1-205ENST00000562914 FBXW7Q969H0 707 aa20.17■□□□□ 0.82
HERPUD1-205ENST00000562914 MPHOSPH8Q99549 860 aa20.17■□□□□ 0.82
HERPUD1-205ENST00000562914 HPS5Q9UPZ3 1129 aa20.17■□□□□ 0.82
HERPUD1-205ENST00000562914 ZNF804BA4D1E1 1349 aa20.17■□□□□ 0.82
HERPUD1-205ENST00000562914 CWF19L2Q2TBE0 894 aaKnown RBP20.16■□□□□ 0.82
HERPUD1-205ENST00000562914 MOB2Q70IA6 237 aa20.16■□□□□ 0.82
HERPUD1-205ENST00000562914 UBE3BQ7Z3V4 1068 aa20.16■□□□□ 0.82
HERPUD1-205ENST00000562914 MYH16Q9H6N6 1097 aa20.16■□□□□ 0.82
HERPUD1-205ENST00000562914 WTIPA6NIX2 430 aaPredicted RBP20.15■□□□□ 0.82
HERPUD1-205ENST00000562914 GPR25O00155 361 aa20.15■□□□□ 0.82
HERPUD1-205ENST00000562914 ALDH1A1P00352 501 aa20.15■□□□□ 0.82
HERPUD1-205ENST00000562914 ITGA6P23229 1130 aa20.15■□□□□ 0.82
HERPUD1-205ENST00000562914 TWISTNBQ3B726 338 aaPredicted RBP20.15■□□□□ 0.82
HERPUD1-205ENST00000562914 ZNF646O15015 1829 aaPredicted RBP20.15■□□□□ 0.82
HERPUD1-205ENST00000562914 TBC1D8O95759 1140 aa20.14■□□□□ 0.81
HERPUD1-205ENST00000562914 INHBEP58166 350 aa20.14■□□□□ 0.81
HERPUD1-205ENST00000562914 GCKRQ14397 625 aa20.14■□□□□ 0.81
HERPUD1-205ENST00000562914 PRPF38BQ5VTL8 546 aaKnown RBP20.14■□□□□ 0.81
HERPUD1-205ENST00000562914 PRAMEF18Q5VWM3 479 aa20.14■□□□□ 0.81
HERPUD1-205ENST00000562914 MXD3Q9BW11 206 aa20.14■□□□□ 0.81
HERPUD1-205ENST00000562914 PDE4DIPQ5VU43 2346 aa20.13■□□□□ 0.81
HERPUD1-205ENST00000562914 IL16Q14005 1332 aa20.13■□□□□ 0.81
HERPUD1-205ENST00000562914 UNCXA6NJT0 531 aa20.13■□□□□ 0.81
HERPUD1-205ENST00000562914 SASH1O94885 1247 aa20.13■□□□□ 0.81
HERPUD1-205ENST00000562914 SLC4A2P04920 1241 aa20.13■□□□□ 0.81
HERPUD1-205ENST00000562914 CSF1RP07333 972 aa20.13■□□□□ 0.81
HERPUD1-205ENST00000562914 KCNJ4P48050 445 aa20.13■□□□□ 0.81
HERPUD1-205ENST00000562914 NCBP3Q53F19 620 aaKnown RBP20.13■□□□□ 0.81
HERPUD1-205ENST00000562914 LDLRAD1Q5T700 205 aa20.13■□□□□ 0.81
HERPUD1-205ENST00000562914 FBXO46Q6PJ61 603 aaPredicted RBP20.13■□□□□ 0.81
HERPUD1-205ENST00000562914 TXNRD3Q86VQ6 643 aa20.13■□□□□ 0.81
HERPUD1-205ENST00000562914 ZBED3Q96IU2 234 aaPredicted RBP20.13■□□□□ 0.81
HERPUD1-205ENST00000562914 SCAF8Q9UPN6 1271 aaKnown RBP20.13■□□□□ 0.81
HERPUD1-205ENST00000562914 PPP2R3BQ9Y5P8 575 aa20.13■□□□□ 0.81
HERPUD1-205ENST00000562914 SPEF2Q9C093 1822 aa20.13■□□□□ 0.81
HERPUD1-205ENST00000562914 TNRC18O15417 2968 aaPredicted RBP20.13■□□□□ 0.81
HERPUD1-205ENST00000562914 KIAA0825Q8IV33 1275 aa20.12■□□□□ 0.81
HERPUD1-205ENST00000562914 MTMR14Q8NCE2 650 aa20.12■□□□□ 0.81
HERPUD1-205ENST00000562914 TSR2Q969E8 191 aaKnown RBP20.12■□□□□ 0.81
HERPUD1-205ENST00000562914 FKTNO75072 461 aa20.11■□□□□ 0.81
HERPUD1-205ENST00000562914 GTF2IP78347 998 aa20.11■□□□□ 0.81
HERPUD1-205ENST00000562914 PTPN12Q05209 780 aaKnown RBP20.11■□□□□ 0.81
HERPUD1-205ENST00000562914 MAP3K11Q16584 847 aa20.11■□□□□ 0.81
HERPUD1-205ENST00000562914 C15orf52Q6ZUT6 534 aaKnown RBP20.11■□□□□ 0.81
HERPUD1-205ENST00000562914 LINS1Q8NG48 757 aa20.11■□□□□ 0.81
HERPUD1-205ENST00000562914 CD209Q9NNX6 404 aa20.11■□□□□ 0.81
HERPUD1-205ENST00000562914 ANKRD18BA2A2Z9 1011 aa20.1■□□□□ 0.81
HERPUD1-205ENST00000562914 MANSC4A6NHS7 340 aaPredicted RBP20.1■□□□□ 0.81
HERPUD1-205ENST00000562914 CASP7P55210 303 aa20.1■□□□□ 0.81
HERPUD1-205ENST00000562914 CHRNDQ07001 517 aa20.1■□□□□ 0.81
HERPUD1-205ENST00000562914 FLIIQ13045 1269 aa20.1■□□□□ 0.81
HERPUD1-205ENST00000562914 DLGAP5Q15398 846 aa20.1■□□□□ 0.81
HERPUD1-205ENST00000562914 SPRYD7Q5W111 196 aa20.1■□□□□ 0.81
HERPUD1-205ENST00000562914 WWC1Q8IX03 1113 aa20.1■□□□□ 0.81
HERPUD1-205ENST00000562914 DNAAF4Q8WXU2 420 aa20.1■□□□□ 0.81
HERPUD1-205ENST00000562914 MYO1BO43795 1136 aa20.09■□□□□ 0.81
HERPUD1-205ENST00000562914 PPP1R12BO60237 982 aaPredicted RBP20.09■□□□□ 0.81
HERPUD1-205ENST00000562914 ZBTB48P10074 688 aaPredicted RBP20.09■□□□□ 0.81
HERPUD1-205ENST00000562914 FKBP1AP62942 108 aaKnown RBP20.09■□□□□ 0.81
HERPUD1-205ENST00000562914 G2E3Q7L622 706 aa20.09■□□□□ 0.81
HERPUD1-205ENST00000562914 DEFB129Q9H1M3 183 aa20.09■□□□□ 0.81
HERPUD1-205ENST00000562914 ANGEL1Q9UNK9 670 aaKnown RBP20.09■□□□□ 0.81
HERPUD1-205ENST00000562914 FKBP5Q13451 457 aaPredicted RBP20.08■□□□□ 0.81
HERPUD1-205ENST00000562914 KLRK1P26718 216 aa20.07■□□□□ 0.8
HERPUD1-205ENST00000562914 MKRN3Q13064 507 aaKnown RBP20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms