RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 LINC01387J3KSC0 135 aa6.28□□□□□ -1.4
HERC1-215ENST00000561436 MSTNO14793 375 aa6.28□□□□□ -1.4
HERC1-215ENST00000561436 KIF4AO95239 1232 aa6.28□□□□□ -1.4
HERC1-215ENST00000561436 XKR5Q6UX68 686 aa6.28□□□□□ -1.4
HERC1-215ENST00000561436 ILDR2Q71H61 639 aa6.28□□□□□ -1.4
HERC1-215ENST00000561436 TMC1Q8TDI8 760 aa6.28□□□□□ -1.4
HERC1-215ENST00000561436 POP1Q99575 1024 aaKnown RBP6.28□□□□□ -1.4
HERC1-215ENST00000561436 SALL4Q9UJQ4 1053 aa6.28□□□□□ -1.4
HERC1-215ENST00000561436 DCAF1Q9Y4B6 1507 aa6.28□□□□□ -1.4
HERC1-215ENST00000561436 CECR2Q9BXF3 1484 aa6.28□□□□□ -1.4
HERC1-215ENST00000561436 METTL12A8MUP2 240 aa6.27□□□□□ -1.41
HERC1-215ENST00000561436 GPR182O15218 404 aa6.27□□□□□ -1.41
HERC1-215ENST00000561436 EPHA1P21709 976 aa6.27□□□□□ -1.41
HERC1-215ENST00000561436 RAC1P63000 192 aa6.27□□□□□ -1.41
HERC1-215ENST00000561436 DOC2BQ14184 412 aa6.27□□□□□ -1.41
HERC1-215ENST00000561436 HGSNATQ68CP4 663 aa6.27□□□□□ -1.41
HERC1-215ENST00000561436 ZKSCAN3Q9BRR0 538 aa6.27□□□□□ -1.41
HERC1-215ENST00000561436 PBX4Q9BYU1 374 aa6.27□□□□□ -1.41
HERC1-215ENST00000561436 SPDYE3A6NKU9 549 aa6.26□□□□□ -1.41
HERC1-215ENST00000561436 NFKBIEO00221 500 aa6.26□□□□□ -1.41
HERC1-215ENST00000561436 NDUFB5O43674 189 aa6.26□□□□□ -1.41
HERC1-215ENST00000561436 APBA3O96018 575 aa6.26□□□□□ -1.41
HERC1-215ENST00000561436 RPLP1P05386 114 aaKnown RBP6.26□□□□□ -1.41
HERC1-215ENST00000561436 FURINP09958 794 aa6.26□□□□□ -1.41
HERC1-215ENST00000561436 PEAR1Q5VY43 1037 aaPredicted RBP6.26□□□□□ -1.41
HERC1-215ENST00000561436 NPM2Q86SE8 214 aaKnown RBP6.26□□□□□ -1.41
HERC1-215ENST00000561436 GALNT11Q8NCW6 608 aa6.26□□□□□ -1.41
HERC1-215ENST00000561436 SNX29Q8TEQ0 813 aa6.26□□□□□ -1.41
HERC1-215ENST00000561436 TTC9Q92623 222 aa6.26□□□□□ -1.41
HERC1-215ENST00000561436 OSMRQ99650 979 aa6.26□□□□□ -1.41
HERC1-215ENST00000561436 NIF3L1Q9GZT8 377 aa6.26□□□□□ -1.41
HERC1-215ENST00000561436 DZANK1Q9NVP4 752 aa6.26□□□□□ -1.41
HERC1-215ENST00000561436 BICRAQ9NZM4 1560 aa6.26□□□□□ -1.41
HERC1-215ENST00000561436 SMNDC1O75940 238 aaKnown RBP eCLIP6.25□□□□□ -1.41
HERC1-215ENST00000561436 ALX3O95076 343 aa6.25□□□□□ -1.41
HERC1-215ENST00000561436 ELNP15502 786 aa6.25□□□□□ -1.41
HERC1-215ENST00000561436 USP5P45974 858 aa6.25□□□□□ -1.41
HERC1-215ENST00000561436 SETDB1Q15047 1291 aa6.25□□□□□ -1.41
HERC1-215ENST00000561436 ZSCAN29Q8IWY8 852 aaPredicted RBP6.25□□□□□ -1.41
HERC1-215ENST00000561436 BCL11AQ9H165 835 aa6.25□□□□□ -1.41
HERC1-215ENST00000561436 ZFYVE28Q9HCC9 887 aa6.25□□□□□ -1.41
HERC1-215ENST00000561436 USP21Q9UK80 565 aa6.25□□□□□ -1.41
HERC1-215ENST00000561436 DDX3YO15523 660 aaKnown RBP6.24□□□□□ -1.41
HERC1-215ENST00000561436 IGHA2P01877 340 aa6.24□□□□□ -1.41
HERC1-215ENST00000561436 CDC27P30260 824 aa6.24□□□□□ -1.41
HERC1-215ENST00000561436 MBTPS1Q14703 1052 aa6.24□□□□□ -1.41
HERC1-215ENST00000561436 AGGF1Q8N302 714 aaeCLIP6.24□□□□□ -1.41
HERC1-215ENST00000561436 RGS22Q8NE09 1264 aa6.24□□□□□ -1.41
HERC1-215ENST00000561436 ASAP3Q8TDY4 903 aa6.24□□□□□ -1.41
HERC1-215ENST00000561436 FAM129BQ96TA1 746 aa6.24□□□□□ -1.41
HERC1-215ENST00000561436 KCNK4Q9NYG8 393 aa6.24□□□□□ -1.41
HERC1-215ENST00000561436 AMOTL2Q9Y2J4 779 aa6.24□□□□□ -1.41
HERC1-215ENST00000561436 PDE2AO00408 941 aaPredicted RBP6.23□□□□□ -1.41
HERC1-215ENST00000561436 WISP1O95388 367 aa6.23□□□□□ -1.41
HERC1-215ENST00000561436 MAPK1P28482 360 aa6.23□□□□□ -1.41
HERC1-215ENST00000561436 GATA4P43694 442 aa6.23□□□□□ -1.41
HERC1-215ENST00000561436 EHHADHQ08426 723 aa6.23□□□□□ -1.41
HERC1-215ENST00000561436 TMC7Q7Z402 723 aa6.23□□□□□ -1.41
HERC1-215ENST00000561436 ALYREFQ86V81 257 aaKnown RBP6.23□□□□□ -1.41
HERC1-215ENST00000561436 FBXO11Q86XK2 927 aa6.23□□□□□ -1.41
HERC1-215ENST00000561436 SLC7A3Q8WY07 619 aa6.23□□□□□ -1.41
HERC1-215ENST00000561436 DCTN4Q9UJW0 460 aa6.23□□□□□ -1.41
HERC1-215ENST00000561436 PPME1Q9Y570 386 aa6.23□□□□□ -1.41
HERC1-215ENST00000561436 DLL1O00548 723 aa6.22□□□□□ -1.41
HERC1-215ENST00000561436 PTPRAP18433 802 aa6.22□□□□□ -1.41
HERC1-215ENST00000561436 NRG1Q02297 640 aaPredicted RBP6.22□□□□□ -1.41
HERC1-215ENST00000561436 FOXD4L6Q3SYB3 417 aaPredicted RBP6.22□□□□□ -1.41
HERC1-215ENST00000561436 PI16Q6UXB8 463 aa6.22□□□□□ -1.41
HERC1-215ENST00000561436 FOXD4L3Q6VB84 417 aaPredicted RBP6.22□□□□□ -1.41
HERC1-215ENST00000561436 SETDB2Q96T68 719 aa6.22□□□□□ -1.41
HERC1-215ENST00000561436 NPHS2Q9NP85 383 aa6.22□□□□□ -1.41
HERC1-215ENST00000561436 TPSG1Q9NRR2 321 aa6.22□□□□□ -1.41
HERC1-215ENST00000561436 A0A1W2PP55 124 aa6.21□□□□□ -1.42
HERC1-215ENST00000561436 EIF1AYO14602 144 aaKnown RBP6.21□□□□□ -1.42
HERC1-215ENST00000561436 IGHA1P01876 353 aa6.21□□□□□ -1.42
HERC1-215ENST00000561436 IREB2P48200 963 aaKnown RBP6.21□□□□□ -1.42
HERC1-215ENST00000561436 ADGRE1Q14246 886 aa6.21□□□□□ -1.42
HERC1-215ENST00000561436 SPRED3Q2MJR0 410 aa6.21□□□□□ -1.42
HERC1-215ENST00000561436 NXPE3Q969Y0 559 aa6.21□□□□□ -1.42
HERC1-215ENST00000561436 KLHDC7BQ96G42 594 aa6.21□□□□□ -1.42
HERC1-215ENST00000561436 MUC3BQ9H195 1237 aa6.21□□□□□ -1.42
HERC1-215ENST00000561436 TM4SF5O14894 197 aa6.2□□□□□ -1.42
HERC1-215ENST00000561436 FSCN2O14926 492 aa6.2□□□□□ -1.42
HERC1-215ENST00000561436 ADAM11O75078 769 aa6.2□□□□□ -1.42
HERC1-215ENST00000561436 EDN3P14138 238 aa6.2□□□□□ -1.42
HERC1-215ENST00000561436 NOS3P29474 1203 aa6.2□□□□□ -1.42
HERC1-215ENST00000561436 NLRP12P59046 1061 aa6.2□□□□□ -1.42
HERC1-215ENST00000561436 UBASH3BQ8TF42 649 aa6.2□□□□□ -1.42
HERC1-215ENST00000561436 LENG1Q96BZ8 264 aaPredicted RBP6.2□□□□□ -1.42
HERC1-215ENST00000561436 CITED4Q96RK1 184 aa6.2□□□□□ -1.42
HERC1-215ENST00000561436 GRIA4P48058 902 aa6.19□□□□□ -1.42
HERC1-215ENST00000561436 PDE3BQ13370 1112 aa6.19□□□□□ -1.42
HERC1-215ENST00000561436 VN1R5Q7Z5H4 357 aa6.19□□□□□ -1.42
HERC1-215ENST00000561436 GALNT12Q8IXK2 581 aa6.19□□□□□ -1.42
HERC1-215ENST00000561436 DTWD1Q8N5C7 304 aa6.19□□□□□ -1.42
HERC1-215ENST00000561436 TMEM102Q8N9M5 508 aaPredicted RBP6.19□□□□□ -1.42
HERC1-215ENST00000561436 EPS8L3Q8TE67 593 aaKnown RBP6.19□□□□□ -1.42
HERC1-215ENST00000561436 WFDC12Q8WWY7 111 aa6.19□□□□□ -1.42
HERC1-215ENST00000561436 FOXD4L4Q8WXT5 416 aaPredicted RBP6.19□□□□□ -1.42
HERC1-215ENST00000561436 PMEPA1Q969W9 287 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms