RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-223ENST00000561304 GRIPAP1Q4V328 841 aa9.53□□□□□ -0.88
ZEB1-223ENST00000561304 EAPPQ56P03 285 aaPredicted RBP9.53□□□□□ -0.88
ZEB1-223ENST00000561304 DPP8Q6V1X1 898 aaPredicted RBP9.53□□□□□ -0.88
ZEB1-223ENST00000561304 FAM9BQ8IZU0 186 aa9.53□□□□□ -0.88
ZEB1-223ENST00000561304 ZBTB38Q8NAP3 1195 aaPredicted RBP9.53□□□□□ -0.88
ZEB1-223ENST00000561304 KHSRPQ92945 711 aaKnown RBP eCLIP9.53□□□□□ -0.886e-7■■■■□ 21.8
ZEB1-223ENST00000561304 HS3ST6Q96QI5 342 aa9.53□□□□□ -0.88
ZEB1-223ENST00000561304 SEC31BQ9NQW1 1179 aa9.53□□□□□ -0.88
ZEB1-223ENST00000561304 HACL1Q9UJ83 578 aa9.53□□□□□ -0.88
ZEB1-223ENST00000561304 PASKQ96RG2 1323 aa9.53□□□□□ -0.88
ZEB1-223ENST00000561304 PI4KAP2A4QPH2 592 aa9.52□□□□□ -0.88
ZEB1-223ENST00000561304 YDJCA8MPS7 323 aa9.52□□□□□ -0.88
ZEB1-223ENST00000561304 PCCAP05165 728 aaPredicted RBP9.52□□□□□ -0.88
ZEB1-223ENST00000561304 NUDT7P0C024 238 aa9.52□□□□□ -0.88
ZEB1-223ENST00000561304 EIF6P56537 245 aaKnown RBP9.52□□□□□ -0.88
ZEB1-223ENST00000561304 KIAA2012Q0VF49 1180 aa9.52□□□□□ -0.88
ZEB1-223ENST00000561304 CWF19L2Q2TBE0 894 aaKnown RBP9.52□□□□□ -0.88
ZEB1-223ENST00000561304 LDHDQ86WU2 507 aa9.52□□□□□ -0.88
ZEB1-223ENST00000561304 NIM1KQ8IY84 436 aa9.52□□□□□ -0.88
ZEB1-223ENST00000561304 MPNDQ8N594 471 aa9.52□□□□□ -0.88
ZEB1-223ENST00000561304 PI4KAP1Q8N8J0 262 aa9.52□□□□□ -0.88
ZEB1-223ENST00000561304 CCDC191Q8NCU4 936 aa9.52□□□□□ -0.88
ZEB1-223ENST00000561304 GPR101Q96P66 508 aaPredicted RBP9.52□□□□□ -0.88
ZEB1-223ENST00000561304 CCDC85AQ96PX6 553 aaPredicted RBP9.52□□□□□ -0.88
ZEB1-223ENST00000561304 CWC25Q9NXE8 425 aaPredicted RBP9.52□□□□□ -0.88
ZEB1-223ENST00000561304 THSD7BQ9C0I4 1608 aa9.52□□□□□ -0.89
ZEB1-223ENST00000561304 DDX58O95786 925 aaKnown RBP9.51□□□□□ -0.89
ZEB1-223ENST00000561304 ITGBL1O95965 494 aaPredicted RBP9.51□□□□□ -0.89
ZEB1-223ENST00000561304 EPS15P42566 896 aa9.51□□□□□ -0.89
ZEB1-223ENST00000561304 GPSM2P81274 684 aa9.51□□□□□ -0.89
ZEB1-223ENST00000561304 EXOSC9Q06265 439 aaKnown RBP9.51□□□□□ -0.89
ZEB1-223ENST00000561304 CXCL9Q07325 125 aa9.51□□□□□ -0.89
ZEB1-223ENST00000561304 CAMK2BQ13554 666 aa9.51□□□□□ -0.89
ZEB1-223ENST00000561304 KSR2Q6VAB6 950 aa9.51□□□□□ -0.89
ZEB1-223ENST00000561304 WDR63Q8IWG1 891 aa9.51□□□□□ -0.89
ZEB1-223ENST00000561304 JMYQ8N9B5 988 aa9.51□□□□□ -0.89
ZEB1-223ENST00000561304 STK31Q9BXU1 1019 aa9.51□□□□□ -0.89
ZEB1-223ENST00000561304 POLLQ9UGP5 575 aa9.51□□□□□ -0.89
ZEB1-223ENST00000561304 CDHR2Q9BYE9 1310 aa9.51□□□□□ -0.89
ZEB1-223ENST00000561304 SHTN1A0MZ66 631 aa9.5□□□□□ -0.89
ZEB1-223ENST00000561304 NEURL1BA8MQ27 555 aa9.5□□□□□ -0.89
ZEB1-223ENST00000561304 PDE8AO60658 829 aa9.5□□□□□ -0.89
ZEB1-223ENST00000561304 VAMP4O75379 141 aa9.5□□□□□ -0.89
ZEB1-223ENST00000561304 FMR1Q06787 632 aaKnown RBP eCLIP9.5□□□□□ -0.89
ZEB1-223ENST00000561304 MAP1SQ66K74 1059 aaPredicted RBP9.5□□□□□ -0.89
ZEB1-223ENST00000561304 SUPT20HQ8NEM7 779 aa9.5□□□□□ -0.89
ZEB1-223ENST00000561304 ZNRF3Q9ULT6 936 aa9.5□□□□□ -0.89
ZEB1-223ENST00000561304 ZNF521Q96K83 1311 aa9.5□□□□□ -0.89
ZEB1-223ENST00000561304 RAD17O75943 681 aa9.5□□□□□ -0.89
ZEB1-223ENST00000561304 GMPSP49915 693 aaPredicted RBP9.5□□□□□ -0.89
ZEB1-223ENST00000561304 CTSWP56202 376 aa9.5□□□□□ -0.89
ZEB1-223ENST00000561304 RPS8P62241 208 aaKnown RBP9.5□□□□□ -0.89
ZEB1-223ENST00000561304 FLIIQ13045 1269 aa9.5□□□□□ -0.89
ZEB1-223ENST00000561304 VARS2Q5ST30 1063 aaKnown RBP9.5□□□□□ -0.89
ZEB1-223ENST00000561304 TMC4Q7Z404 712 aa9.5□□□□□ -0.89
ZEB1-223ENST00000561304 TMX4Q9H1E5 349 aaPredicted RBP9.5□□□□□ -0.89
ZEB1-223ENST00000561304 VPS33BQ9H267 617 aa9.5□□□□□ -0.89
ZEB1-223ENST00000561304 DBNDD1Q9H9R9 158 aa9.5□□□□□ -0.89
ZEB1-223ENST00000561304 TSHZ2Q9NRE2 1034 aa9.5□□□□□ -0.89
ZEB1-223ENST00000561304 WDR70Q9NW82 654 aa9.5□□□□□ -0.89
ZEB1-223ENST00000561304 GPRC5DQ9NZD1 345 aa9.5□□□□□ -0.89
ZEB1-223ENST00000561304 NSFL1CQ9UNZ2 370 aaKnown RBP9.5□□□□□ -0.89
ZEB1-223ENST00000561304 RTL9Q8NET4 1388 aa9.49□□□□□ -0.89
ZEB1-223ENST00000561304 WTIPA6NIX2 430 aaPredicted RBP9.49□□□□□ -0.89
ZEB1-223ENST00000561304 LMOD1P29536 600 aaPredicted RBP9.49□□□□□ -0.89
ZEB1-223ENST00000561304 CASP7P55210 303 aa9.49□□□□□ -0.89
ZEB1-223ENST00000561304 CCDC152Q4G0S7 254 aa9.49□□□□□ -0.89
ZEB1-223ENST00000561304 TBC1D16Q8TBP0 767 aa9.49□□□□□ -0.89
ZEB1-223ENST00000561304 GREM2Q9H772 168 aa9.49□□□□□ -0.89
ZEB1-223ENST00000561304 KCNQ5Q9NR82 932 aa9.49□□□□□ -0.89
ZEB1-223ENST00000561304 MKRN1Q9UHC7 482 aaKnown RBP9.49□□□□□ -0.89
ZEB1-223ENST00000561304 ECM29Q5VYK3 1845 aa9.48□□□□□ -0.89
ZEB1-223ENST00000561304 F6X3S4 739 aa9.48□□□□□ -0.89
ZEB1-223ENST00000561304 C6orf229H3BNL8 230 aa9.48□□□□□ -0.89
ZEB1-223ENST00000561304 FKBP5Q13451 457 aaPredicted RBP9.48□□□□□ -0.89
ZEB1-223ENST00000561304 CIAPIN1Q6FI81 312 aa9.48□□□□□ -0.89
ZEB1-223ENST00000561304 UBE3BQ7Z3V4 1068 aa9.48□□□□□ -0.89
ZEB1-223ENST00000561304 PNMA8AQ86V59 439 aaPredicted RBP9.48□□□□□ -0.89
ZEB1-223ENST00000561304 CNTROBQ8N137 903 aa9.48□□□□□ -0.89
ZEB1-223ENST00000561304 TTLL11Q8NHH1 800 aa9.48□□□□□ -0.89
ZEB1-223ENST00000561304 TRPM4Q8TD43 1214 aa9.48□□□□□ -0.89
ZEB1-223ENST00000561304 EMILIN3Q9NT22 766 aa9.48□□□□□ -0.89
ZEB1-223ENST00000561304 CNTNAP1P78357 1384 aa9.48□□□□□ -0.89
ZEB1-223ENST00000561304 H7C1W4 665 aa9.47□□□□□ -0.89
ZEB1-223ENST00000561304 TRAF5O00463 557 aa9.47□□□□□ -0.89
ZEB1-223ENST00000561304 PSMD14O00487 310 aa9.47□□□□□ -0.89
ZEB1-223ENST00000561304 ECE2O60344 883 aa9.47□□□□□ -0.89
ZEB1-223ENST00000561304 UFL1O94874 794 aa9.47□□□□□ -0.89
ZEB1-223ENST00000561304 HIRAP54198 1017 aaPredicted RBP9.47□□□□□ -0.89
ZEB1-223ENST00000561304 NEXNQ0ZGT2 675 aa9.47□□□□□ -0.89
ZEB1-223ENST00000561304 GCKRQ14397 625 aa9.47□□□□□ -0.89
ZEB1-223ENST00000561304 WASHC4Q2M389 1173 aa9.47□□□□□ -0.89
ZEB1-223ENST00000561304 DNAAF4Q8WXU2 420 aa9.47□□□□□ -0.89
ZEB1-223ENST00000561304 CHMP4AQ9BY43 222 aa9.47□□□□□ -0.89
ZEB1-223ENST00000561304 PODXL2Q9NZ53 605 aa9.47□□□□□ -0.89
ZEB1-223ENST00000561304 LHX6Q9UPM6 363 aa9.47□□□□□ -0.89
ZEB1-223ENST00000561304 ARAP2Q8WZ64 1704 aa9.47□□□□□ -0.89
ZEB1-223ENST00000561304 TMEM88BA6NKF7 163 aa9.46□□□□□ -0.9
ZEB1-223ENST00000561304 EGFRP00533 1210 aa9.46□□□□□ -0.9
ZEB1-223ENST00000561304 MAP3K9P80192 1104 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms