RNA–Protein interactions for RNA: ENST00000559300.5

SEMA4B-210, Transcript of semaphorin 4B, humanhuman

TSL 4

Gene SEMA4B, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-210ENST00000559300 PSMD14O00487 310 aa22.58■■□□□ 1.21
SEMA4B-210ENST00000559300 IL15P40933 162 aaPredicted RBP22.58■■□□□ 1.21
SEMA4B-210ENST00000559300 C20orf194Q5TEA3 1177 aa22.58■■□□□ 1.21
SEMA4B-210ENST00000559300 CHMP4BQ9H444 224 aaKnown RBP22.58■■□□□ 1.21
SEMA4B-210ENST00000559300 TAF1DQ9H5J8 278 aaPredicted RBP22.58■■□□□ 1.21
SEMA4B-210ENST00000559300 COG6Q9Y2V7 657 aa22.58■■□□□ 1.21
SEMA4B-210ENST00000559300 PNMA6EA0A0J9YXQ4 647 aa22.57■■□□□ 1.2
SEMA4B-210ENST00000559300 VIL1P09327 827 aaKnown RBP22.57■■□□□ 1.2
SEMA4B-210ENST00000559300 ATP8B2P98198 1209 aa22.57■■□□□ 1.2
SEMA4B-210ENST00000559300 POLA2Q14181 598 aa22.57■■□□□ 1.2
SEMA4B-210ENST00000559300 C16orf71Q8IYS4 520 aaPredicted RBP22.57■■□□□ 1.2
SEMA4B-210ENST00000559300 RBM46Q8TBY0 533 aaKnown RBP22.57■■□□□ 1.2
SEMA4B-210ENST00000559300 DPF2Q92785 391 aa22.57■■□□□ 1.2
SEMA4B-210ENST00000559300 PA2G4Q9UQ80 394 aaKnown RBP22.57■■□□□ 1.2
SEMA4B-210ENST00000559300 RPS12P25398 132 aaKnown RBP22.56■■□□□ 1.2
SEMA4B-210ENST00000559300 LMOD1P29536 600 aaPredicted RBP22.56■■□□□ 1.2
SEMA4B-210ENST00000559300 GMPSP49915 693 aaPredicted RBP22.56■■□□□ 1.2
SEMA4B-210ENST00000559300 SSH3Q8TE77 659 aa22.56■■□□□ 1.2
SEMA4B-210ENST00000559300 SIL1Q9H173 461 aa22.56■■□□□ 1.2
SEMA4B-210ENST00000559300 C1orf115Q9H7X2 142 aa22.56■■□□□ 1.2
SEMA4B-210ENST00000559300 CD209Q9NNX6 404 aa22.56■■□□□ 1.2
SEMA4B-210ENST00000559300 ZBTB40Q9NUA8 1239 aa22.56■■□□□ 1.2
SEMA4B-210ENST00000559300 GPRC5DQ9NZD1 345 aa22.56■■□□□ 1.2
SEMA4B-210ENST00000559300 ZNF609O15014 1411 aa22.56■■□□□ 1.2
SEMA4B-210ENST00000559300 USP17L3A6NCW0 530 aa22.55■■□□□ 1.2
SEMA4B-210ENST00000559300 USP17L4A6NCW7 530 aa22.55■■□□□ 1.2
SEMA4B-210ENST00000559300 FGFR2P21802 821 aa22.55■■□□□ 1.2
SEMA4B-210ENST00000559300 EPHX2P34913 555 aa22.55■■□□□ 1.2
SEMA4B-210ENST00000559300 C1QTNF8P60827 252 aa22.55■■□□□ 1.2
SEMA4B-210ENST00000559300 PUM3Q15397 648 aaKnown RBP22.55■■□□□ 1.2
SEMA4B-210ENST00000559300 USP17L1Q7RTZ2 530 aa22.55■■□□□ 1.2
SEMA4B-210ENST00000559300 ZNF804AQ7Z570 1209 aa22.55■■□□□ 1.2
SEMA4B-210ENST00000559300 IL1R1P14778 569 aa22.54■■□□□ 1.2
SEMA4B-210ENST00000559300 RRP1P56182 461 aaKnown RBP22.54■■□□□ 1.2
SEMA4B-210ENST00000559300 PNMA8AQ86V59 439 aaPredicted RBP22.54■■□□□ 1.2
SEMA4B-210ENST00000559300 CEP126Q9P2H0 1117 aa22.54■■□□□ 1.2
SEMA4B-210ENST00000559300 EPS15P42566 896 aa22.53■■□□□ 1.2
SEMA4B-210ENST00000559300 STRIP1Q5VSL9 837 aa22.53■■□□□ 1.2
SEMA4B-210ENST00000559300 CEP85Q6P2H3 762 aa22.53■■□□□ 1.2
SEMA4B-210ENST00000559300 RSBN1LQ6PCB5 846 aaPredicted RBP22.53■■□□□ 1.2
SEMA4B-210ENST00000559300 FAM84BQ96KN1 310 aaPredicted RBP22.53■■□□□ 1.2
SEMA4B-210ENST00000559300 ZBTB12Q9Y330 459 aaPredicted RBP22.53■■□□□ 1.2
SEMA4B-210ENST00000559300 DACT2Q5SW24 774 aa22.52■■□□□ 1.2
SEMA4B-210ENST00000559300 FBXO33Q7Z6M2 555 aa22.52■■□□□ 1.2
SEMA4B-210ENST00000559300 AGBL3Q8NEM8 1001 aa22.52■■□□□ 1.2
SEMA4B-210ENST00000559300 LPIN2Q92539 896 aa22.52■■□□□ 1.2
SEMA4B-210ENST00000559300 SCN4AP35499 1836 aa22.52■■□□□ 1.2
SEMA4B-210ENST00000559300 A0A1B0GUL6 1792 aa22.51■■□□□ 1.19
SEMA4B-210ENST00000559300 IFIT1P09914 478 aaKnown RBP22.51■■□□□ 1.19
SEMA4B-210ENST00000559300 HIBADHP31937 336 aaKnown RBP22.51■■□□□ 1.19
SEMA4B-210ENST00000559300 FSTL1Q12841 308 aa22.51■■□□□ 1.19
SEMA4B-210ENST00000559300 USP50Q70EL3 339 aaPredicted RBP22.51■■□□□ 1.19
SEMA4B-210ENST00000559300 GMLQ99445 158 aa22.51■■□□□ 1.19
SEMA4B-210ENST00000559300 ADARB2Q9NS39 739 aaKnown RBP22.51■■□□□ 1.19
SEMA4B-210ENST00000559300 GYG1P46976 350 aa22.5■■□□□ 1.19
SEMA4B-210ENST00000559300 LDHDQ86WU2 507 aa22.5■■□□□ 1.19
SEMA4B-210ENST00000559300 RPAP2Q8IXW5 612 aaPredicted RBP22.5■■□□□ 1.19
SEMA4B-210ENST00000559300 SMC1BQ8NDV3 1235 aa22.5■■□□□ 1.19
SEMA4B-210ENST00000559300 TDRD7Q8NHU6 1098 aaKnown RBP22.5■■□□□ 1.19
SEMA4B-210ENST00000559300 CNOT7Q9UIV1 285 aaKnown RBP22.5■■□□□ 1.19
SEMA4B-210ENST00000559300 NOP58Q9Y2X3 529 aaKnown RBP22.5■■□□□ 1.19
SEMA4B-210ENST00000559300 SASH1O94885 1247 aa22.49■■□□□ 1.19
SEMA4B-210ENST00000559300 SLC5A1P13866 664 aa22.49■■□□□ 1.19
SEMA4B-210ENST00000559300 G3BP1Q13283 466 aaKnown RBP eCLIP22.49■■□□□ 1.19
SEMA4B-210ENST00000559300 CAVIN4Q5BKX8 364 aa22.49■■□□□ 1.19
SEMA4B-210ENST00000559300 TTLL5Q6EMB2 1281 aa22.49■■□□□ 1.19
SEMA4B-210ENST00000559300 MYO3BQ8WXR4 1341 aa22.49■■□□□ 1.19
SEMA4B-210ENST00000559300 SCN9AQ15858 1988 aa22.49■■□□□ 1.19
SEMA4B-210ENST00000559300 H7C1D1 291 aa22.48■■□□□ 1.19
SEMA4B-210ENST00000559300 GTF2IP78347 998 aa22.48■■□□□ 1.19
SEMA4B-210ENST00000559300 ATP2B3Q16720 1220 aa22.48■■□□□ 1.19
SEMA4B-210ENST00000559300 MICALL2Q8IY33 904 aa22.48■■□□□ 1.19
SEMA4B-210ENST00000559300 POTEIP0CG38 1075 aa22.47■■□□□ 1.19
SEMA4B-210ENST00000559300 POTEJP0CG39 1038 aa22.47■■□□□ 1.19
SEMA4B-210ENST00000559300 MMP14P50281 582 aa22.47■■□□□ 1.19
SEMA4B-210ENST00000559300 ZNF280AP59817 542 aaPredicted RBP22.47■■□□□ 1.19
SEMA4B-210ENST00000559300 FKBP1AP62942 108 aaKnown RBP22.47■■□□□ 1.19
SEMA4B-210ENST00000559300 CHADLQ6NUI6 762 aa22.47■■□□□ 1.19
SEMA4B-210ENST00000559300 AKAP2Q9Y2D5 859 aa22.47■■□□□ 1.19
SEMA4B-210ENST00000559300 FAM205AQ6ZU69 1335 aa22.47■■□□□ 1.19
SEMA4B-210ENST00000559300 SURF6O75683 361 aaKnown RBP22.46■■□□□ 1.19
SEMA4B-210ENST00000559300 TFCP2Q12800 502 aa22.46■■□□□ 1.19
SEMA4B-210ENST00000559300 EAPPQ56P03 285 aaPredicted RBP22.46■■□□□ 1.19
SEMA4B-210ENST00000559300 VPS37DQ86XT2 251 aa22.46■■□□□ 1.19
SEMA4B-210ENST00000559300 SHTN1A0MZ66 631 aa22.45■■□□□ 1.18
SEMA4B-210ENST00000559300 ZBTB22O15209 634 aa22.45■■□□□ 1.18
SEMA4B-210ENST00000559300 USP17L8P0C7I0 530 aa22.45■■□□□ 1.18
SEMA4B-210ENST00000559300 BCAMP50895 628 aa22.45■■□□□ 1.18
SEMA4B-210ENST00000559300 SIRT2Q8IXJ6 389 aa22.44■■□□□ 1.18
SEMA4B-210ENST00000559300 ZC3H15Q8WU90 426 aaKnown RBP22.44■■□□□ 1.18
SEMA4B-210ENST00000559300 FBXW7Q969H0 707 aa22.44■■□□□ 1.18
SEMA4B-210ENST00000559300 MXD3Q9BW11 206 aa22.44■■□□□ 1.18
SEMA4B-210ENST00000559300 PGAP2Q9UHJ9 254 aa22.44■■□□□ 1.18
SEMA4B-210ENST00000559300 HMMRO75330 724 aa22.43■■□□□ 1.18
SEMA4B-210ENST00000559300 HIRAP54198 1017 aaPredicted RBP22.43■■□□□ 1.18
SEMA4B-210ENST00000559300 GPR108Q9NPR9 543 aa22.43■■□□□ 1.18
SEMA4B-210ENST00000559300 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.43■■□□□ 1.18
SEMA4B-210ENST00000559300 A0A1B0GUL7 405 aa22.42■■□□□ 1.18
SEMA4B-210ENST00000559300 SAMD7Q7Z3H4 446 aa22.42■■□□□ 1.18
SEMA4B-210ENST00000559300 CERS5Q8N5B7 392 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 150.7 ms