RNA–Protein interactions for RNA: ENST00000555962.5

CHD8-210, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 1,232 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-210ENST00000555962 FKBP4Q02790 459 aaKnown RBP eCLIP11.24□□□□□ -0.61
CHD8-210ENST00000555962 IFIT5Q13325 482 aaKnown RBP11.24□□□□□ -0.61
CHD8-210ENST00000555962 PDE3AQ14432 1141 aa11.24□□□□□ -0.61
CHD8-210ENST00000555962 MVPQ14764 893 aaKnown RBP11.24□□□□□ -0.61
CHD8-210ENST00000555962 PPP1R15BQ5SWA1 713 aa11.24□□□□□ -0.61
CHD8-210ENST00000555962 CC2D2BQ6DHV5 1058 aa11.24□□□□□ -0.61
CHD8-210ENST00000555962 RTKN2Q8IZC4 609 aa11.24□□□□□ -0.61
CHD8-210ENST00000555962 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.24□□□□□ -0.61
CHD8-210ENST00000555962 TAOK3Q9H2K8 898 aa11.24□□□□□ -0.61
CHD8-210ENST00000555962 C1orf115Q9H7X2 142 aa11.24□□□□□ -0.61
CHD8-210ENST00000555962 BSDC1Q9NW68 430 aaPredicted RBP11.24□□□□□ -0.61
CHD8-210ENST00000555962 RFX5P48382 616 aaPredicted RBP11.23□□□□□ -0.61
CHD8-210ENST00000555962 CCDC57Q2TAC2 916 aa11.23□□□□□ -0.61
CHD8-210ENST00000555962 MPNDQ8N594 471 aa11.23□□□□□ -0.61
CHD8-210ENST00000555962 KLHDC4Q8TBB5 520 aa11.23□□□□□ -0.61
CHD8-210ENST00000555962 PSMD1Q99460 953 aa11.23□□□□□ -0.61
CHD8-210ENST00000555962 ZNF277Q9NRM2 450 aaPredicted RBP11.23□□□□□ -0.61
CHD8-210ENST00000555962 SCN9AQ15858 1988 aa11.23□□□□□ -0.61
CHD8-210ENST00000555962 WTIPA6NIX2 430 aaPredicted RBP11.22□□□□□ -0.61
CHD8-210ENST00000555962 GNAI2P04899 355 aa11.22□□□□□ -0.61
CHD8-210ENST00000555962 LMNB1P20700 586 aa11.22□□□□□ -0.61
CHD8-210ENST00000555962 IGHMBP2P38935 993 aaKnown RBP11.22□□□□□ -0.61
CHD8-210ENST00000555962 PSME4Q14997 1843 aa11.22□□□□□ -0.61
CHD8-210ENST00000555962 C9orf131Q5VYM1 1079 aa11.22□□□□□ -0.61
CHD8-210ENST00000555962 DPP8Q6V1X1 898 aaPredicted RBP11.22□□□□□ -0.61
CHD8-210ENST00000555962 RTFDC1Q9BY42 306 aaPredicted RBP11.22□□□□□ -0.61
CHD8-210ENST00000555962 PUS3Q9BZE2 481 aaKnown RBP11.22□□□□□ -0.61
CHD8-210ENST00000555962 GPHNQ9NQX3 736 aaPredicted RBP11.22□□□□□ -0.61
CHD8-210ENST00000555962 RNF181Q9P0P0 153 aa11.22□□□□□ -0.61
CHD8-210ENST00000555962 MINPP1Q9UNW1 487 aa11.22□□□□□ -0.61
CHD8-210ENST00000555962 NSFL1CQ9UNZ2 370 aaKnown RBP11.22□□□□□ -0.61
CHD8-210ENST00000555962 ZNF646O15015 1829 aaPredicted RBP11.21□□□□□ -0.61
CHD8-210ENST00000555962 TIE1P35590 1138 aa11.21□□□□□ -0.61
CHD8-210ENST00000555962 MLLT3P42568 568 aaPredicted RBP11.21□□□□□ -0.61
CHD8-210ENST00000555962 PTPN12Q05209 780 aaKnown RBP11.21□□□□□ -0.61
CHD8-210ENST00000555962 MTX1Q13505 466 aa11.21□□□□□ -0.61
CHD8-210ENST00000555962 GRIPAP1Q4V328 841 aa11.21□□□□□ -0.61
CHD8-210ENST00000555962 RBM26Q5T8P6 1007 aaKnown RBP11.21□□□□□ -0.61
CHD8-210ENST00000555962 GPR101Q96P66 508 aaPredicted RBP11.21□□□□□ -0.61
CHD8-210ENST00000555962 MPHOSPH8Q99549 860 aa11.21□□□□□ -0.61
CHD8-210ENST00000555962 TMX4Q9H1E5 349 aaPredicted RBP11.21□□□□□ -0.61
CHD8-210ENST00000555962 PODXL2Q9NZ53 605 aa11.21□□□□□ -0.61
CHD8-210ENST00000555962 POLLQ9UGP5 575 aa11.21□□□□□ -0.61
CHD8-210ENST00000555962 DDX19BQ9UMR2 479 aa11.21□□□□□ -0.61
CHD8-210ENST00000555962 HDAC5Q9UQL6 1122 aa11.21□□□□□ -0.61
CHD8-210ENST00000555962 XDHP47989 1333 aa11.2□□□□□ -0.62
CHD8-210ENST00000555962 PNMA6EA0A0J9YXQ4 647 aa11.2□□□□□ -0.62
CHD8-210ENST00000555962 TTLL13PA6NNM8 815 aa11.2□□□□□ -0.62
CHD8-210ENST00000555962 IARSP41252 1262 aaKnown RBP11.2□□□□□ -0.62
CHD8-210ENST00000555962 CHRNDQ07001 517 aa11.2□□□□□ -0.62
CHD8-210ENST00000555962 LRRC24Q50LG9 513 aa11.2□□□□□ -0.62
CHD8-210ENST00000555962 TAF7LQ5H9L4 462 aa11.2□□□□□ -0.62
CHD8-210ENST00000555962 LDHAL6AQ6ZMR3 332 aa11.2□□□□□ -0.62
CHD8-210ENST00000555962 HELBQ8NG08 1087 aaPredicted RBP11.2□□□□□ -0.62
CHD8-210ENST00000555962 TBC1D16Q8TBP0 767 aa11.2□□□□□ -0.62
CHD8-210ENST00000555962 ZBTB40Q9NUA8 1239 aa11.2□□□□□ -0.62
CHD8-210ENST00000555962 PA2G4Q9UQ80 394 aaKnown RBP11.2□□□□□ -0.62
CHD8-210ENST00000555962 MYH13Q9UKX3 1938 aa11.19□□□□□ -0.62
CHD8-210ENST00000555962 C6orf229H3BNL8 230 aa11.19□□□□□ -0.62
CHD8-210ENST00000555962 SNAP23O00161 211 aa11.19□□□□□ -0.62
CHD8-210ENST00000555962 SRGAP3O43295 1099 aa11.19□□□□□ -0.62
CHD8-210ENST00000555962 TAF5LO75529 589 aa11.19□□□□□ -0.62
CHD8-210ENST00000555962 AOC3Q16853 763 aa11.19□□□□□ -0.62
CHD8-210ENST00000555962 GPIHBP1Q8IV16 184 aa11.19□□□□□ -0.62
CHD8-210ENST00000555962 CNNM1Q9NRU3 951 aa11.19□□□□□ -0.62
CHD8-210ENST00000555962 ANKIB1Q9P2G1 1089 aa11.19□□□□□ -0.62
CHD8-210ENST00000555962 RIPOR2Q9Y4F9 1068 aa11.19□□□□□ -0.62
CHD8-210ENST00000555962 SUPT16HQ9Y5B9 1047 aaKnown RBP11.19□□□□□ -0.62
CHD8-210ENST00000555962 EYA2O00167 538 aa11.18□□□□□ -0.62
CHD8-210ENST00000555962 RIMBP2O15034 1052 aa11.18□□□□□ -0.62
CHD8-210ENST00000555962 PPIP5K2O43314 1243 aa11.18□□□□□ -0.62
CHD8-210ENST00000555962 UFL1O94874 794 aa11.18□□□□□ -0.62
CHD8-210ENST00000555962 YY1P25490 414 aa11.18□□□□□ -0.62
CHD8-210ENST00000555962 ATP8B2P98198 1209 aa11.18□□□□□ -0.62
CHD8-210ENST00000555962 KIAA2012Q0VF49 1180 aa11.18□□□□□ -0.62
CHD8-210ENST00000555962 CEP85Q6P2H3 762 aa11.18□□□□□ -0.62
CHD8-210ENST00000555962 ATG9AQ7Z3C6 839 aa11.18□□□□□ -0.62
CHD8-210ENST00000555962 SUPT20HQ8NEM7 779 aa11.18□□□□□ -0.62
CHD8-210ENST00000555962 ANKRD2Q9GZV1 360 aa11.18□□□□□ -0.62
CHD8-210ENST00000555962 SIL1Q9H173 461 aa11.18□□□□□ -0.62
CHD8-210ENST00000555962 COPRSQ9NQ92 184 aa11.18□□□□□ -0.62
CHD8-210ENST00000555962 GGA1Q9UJY5 639 aa11.18□□□□□ -0.62
CHD8-210ENST00000555962 ARAP2Q8WZ64 1704 aa11.18□□□□□ -0.62
CHD8-210ENST00000555962 C19orf67A6NJJ6 358 aa11.17□□□□□ -0.62
CHD8-210ENST00000555962 ATP2B4P23634 1241 aa11.17□□□□□ -0.62
CHD8-210ENST00000555962 KLRK1P26718 216 aa11.17□□□□□ -0.62
CHD8-210ENST00000555962 WASHC4Q2M389 1173 aa11.17□□□□□ -0.62
CHD8-210ENST00000555962 TXNRD3Q86VQ6 643 aa11.17□□□□□ -0.62
CHD8-210ENST00000555962 LARGE2Q8N3Y3 721 aa11.17□□□□□ -0.62
CHD8-210ENST00000555962 KRI1Q8N9T8 703 aaKnown RBP11.17□□□□□ -0.62
CHD8-210ENST00000555962 SSH3Q8TE77 659 aa11.17□□□□□ -0.62
CHD8-210ENST00000555962 CRBNQ96SW2 442 aa11.17□□□□□ -0.62
CHD8-210ENST00000555962 ZNF804BA4D1E1 1349 aa11.16□□□□□ -0.62
CHD8-210ENST00000555962 MROH5Q6ZUA9 1318 aa11.16□□□□□ -0.62
CHD8-210ENST00000555962 IRS2Q9Y4H2 1338 aa11.16□□□□□ -0.62
CHD8-210ENST00000555962 DPYSL4O14531 572 aa11.16□□□□□ -0.62
CHD8-210ENST00000555962 SIRT2Q8IXJ6 389 aa11.16□□□□□ -0.62
CHD8-210ENST00000555962 VGLL2Q8N8G2 317 aa11.16□□□□□ -0.62
CHD8-210ENST00000555962 VPS33BQ9H267 617 aa11.16□□□□□ -0.62
CHD8-210ENST00000555962 LEMD3Q9Y2U8 911 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms