RNA–Protein interactions for RNA: ENST00000555958.5

ATXN3-234, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-234ENST00000555958 CITED4Q96RK1 184 aa8.88□□□□□ -0.99
ATXN3-234ENST00000555958 BIN2Q9UBW5 565 aaPredicted RBP8.88□□□□□ -0.99
ATXN3-234ENST00000555958 LINC01387J3KSC0 135 aa8.87□□□□□ -0.99
ATXN3-234ENST00000555958 NFKBIEO00221 500 aa8.87□□□□□ -0.99
ATXN3-234ENST00000555958 EDN3P14138 238 aa8.87□□□□□ -0.99
ATXN3-234ENST00000555958 PTPRAP18433 802 aa8.87□□□□□ -0.99
ATXN3-234ENST00000555958 CDC25BP30305 580 aa8.87□□□□□ -0.99
ATXN3-234ENST00000555958 NRG1Q02297 640 aaPredicted RBP8.87□□□□□ -0.99
ATXN3-234ENST00000555958 ADAMTSL4Q6UY14 1074 aa8.87□□□□□ -0.99
ATXN3-234ENST00000555958 OSMRQ99650 979 aa8.87□□□□□ -0.99
ATXN3-234ENST00000555958 TRAIPQ9BWF2 469 aa8.87□□□□□ -0.99
ATXN3-234ENST00000555958 SH2B1Q9NRF2 756 aaPredicted RBP8.87□□□□□ -0.99
ATXN3-234ENST00000555958 USP21Q9UK80 565 aa8.87□□□□□ -0.99
ATXN3-234ENST00000555958 AMOTL2Q9Y2J4 779 aa8.87□□□□□ -0.99
ATXN3-234ENST00000555958 FAM177BA6PVY3 158 aa8.86□□□□□ -0.99
ATXN3-234ENST00000555958 PDE2AO00408 941 aaPredicted RBP8.86□□□□□ -0.99
ATXN3-234ENST00000555958 POLR3DP05423 398 aaPredicted RBP8.86□□□□□ -0.99
ATXN3-234ENST00000555958 DOC2BQ14184 412 aa8.86□□□□□ -0.99
ATXN3-234ENST00000555958 SETDB1Q15047 1291 aa8.86□□□□□ -0.99
ATXN3-234ENST00000555958 IGF2-ASQ6U949 168 aa8.86□□□□□ -0.99
ATXN3-234ENST00000555958 ADAM19Q9H013 955 aa8.86□□□□□ -0.99
ATXN3-234ENST00000555958 DLL1O00548 723 aa8.85□□□□□ -0.99
ATXN3-234ENST00000555958 NEFLP07196 543 aa8.85□□□□□ -0.99
ATXN3-234ENST00000555958 ADGRE1Q14246 886 aa8.85□□□□□ -0.99
ATXN3-234ENST00000555958 MAP4K3Q8IVH8 894 aa8.85□□□□□ -0.99
ATXN3-234ENST00000555958 HHIPQ96QV1 700 aa8.85□□□□□ -0.99
ATXN3-234ENST00000555958 KCNA1Q09470 495 aa8.84□□□□□ -0.99
ATXN3-234ENST00000555958 MBTPS1Q14703 1052 aa8.84□□□□□ -0.99
ATXN3-234ENST00000555958 TXNDC11Q6PKC3 985 aa8.84□□□□□ -0.99
ATXN3-234ENST00000555958 TMEM102Q8N9M5 508 aaPredicted RBP8.84□□□□□ -0.99
ATXN3-234ENST00000555958 NXPE3Q969Y0 559 aa8.84□□□□□ -0.99
ATXN3-234ENST00000555958 FAM129BQ96TA1 746 aa8.84□□□□□ -0.99
ATXN3-234ENST00000555958 ZKSCAN3Q9BRR0 538 aa8.84□□□□□ -0.99
ATXN3-234ENST00000555958 SRA1Q9HD15 236 aaKnown RBP8.84□□□□□ -0.99
ATXN3-234ENST00000555958 FURINP09958 794 aa8.83□□□□□ -1
ATXN3-234ENST00000555958 FAM117BQ6P1L5 589 aa8.83□□□□□ -1
ATXN3-234ENST00000555958 NIF3L1Q9GZT8 377 aa8.83□□□□□ -1
ATXN3-234ENST00000555958 LATS2Q9NRM7 1088 aa8.83□□□□□ -1
ATXN3-234ENST00000555958 IVNS1ABPQ9Y6Y0 642 aa8.83□□□□□ -1
ATXN3-234ENST00000555958 EPHA1P21709 976 aa8.82□□□□□ -1
ATXN3-234ENST00000555958 PEAR1Q5VY43 1037 aaPredicted RBP8.82□□□□□ -1
ATXN3-234ENST00000555958 USPL1Q5W0Q7 1092 aa8.82□□□□□ -1
ATXN3-234ENST00000555958 RBCK1Q9BYM8 510 aa8.82□□□□□ -1
ATXN3-234ENST00000555958 FSCN2O14926 492 aa8.81□□□□□ -1
ATXN3-234ENST00000555958 CABP4P57796 275 aa8.81□□□□□ -1
ATXN3-234ENST00000555958 ORC1Q13415 861 aa8.81□□□□□ -1
ATXN3-234ENST00000555958 TXNRD3Q86VQ6 643 aa8.81□□□□□ -1
ATXN3-234ENST00000555958 GALNT12Q8IXK2 581 aa8.81□□□□□ -1
ATXN3-234ENST00000555958 GALNT11Q8NCW6 608 aa8.81□□□□□ -1
ATXN3-234ENST00000555958 DCAF11Q8TEB1 546 aa8.81□□□□□ -1
ATXN3-234ENST00000555958 WFDC12Q8WWY7 111 aa8.81□□□□□ -1
ATXN3-234ENST00000555958 CPNE3O75131 537 aaKnown RBP8.8□□□□□ -1
ATXN3-234ENST00000555958 IREB2P48200 963 aaKnown RBP8.8□□□□□ -1
ATXN3-234ENST00000555958 ASAP3Q8TDY4 903 aa8.8□□□□□ -1
ATXN3-234ENST00000555958 CARD10Q9BWT7 1032 aa8.8□□□□□ -1
ATXN3-234ENST00000555958 TPSG1Q9NRR2 321 aa8.8□□□□□ -1
ATXN3-234ENST00000555958 DCTN4Q9UJW0 460 aa8.8□□□□□ -1
ATXN3-234ENST00000555958 A0A1W2PP55 124 aa8.79□□□□□ -1
ATXN3-234ENST00000555958 GPR182O15218 404 aa8.79□□□□□ -1
ATXN3-234ENST00000555958 IGHA2P01877 340 aa8.79□□□□□ -1
ATXN3-234ENST00000555958 CD68P34810 354 aaPredicted RBP8.79□□□□□ -1
ATXN3-234ENST00000555958 KLHL23Q8NBE8 558 aa8.79□□□□□ -1
ATXN3-234ENST00000555958 BSNDQ8WZ55 320 aa8.79□□□□□ -1
ATXN3-234ENST00000555958 DMRTB1Q96MA1 342 aa8.79□□□□□ -1
ATXN3-234ENST00000555958 MRPL18Q9H0U6 180 aaKnown RBP8.79□□□□□ -1
ATXN3-234ENST00000555958 H3BRJ5 948 aa8.78□□□□□ -1
ATXN3-234ENST00000555958 EIF1AYO14602 144 aaKnown RBP8.78□□□□□ -1
ATXN3-234ENST00000555958 ALX3O95076 343 aa8.78□□□□□ -1
ATXN3-234ENST00000555958 PDIA4P13667 645 aaKnown RBP8.78□□□□□ -1
ATXN3-234ENST00000555958 NOS3P29474 1203 aa8.78□□□□□ -1
ATXN3-234ENST00000555958 TMC7Q7Z402 723 aa8.78□□□□□ -1
ATXN3-234ENST00000555958 TMEM130Q8N3G9 435 aa8.78□□□□□ -1
ATXN3-234ENST00000555958 KLHDC7BQ96G42 594 aa8.78□□□□□ -1
ATXN3-234ENST00000555958 SEC31BQ9NQW1 1179 aa8.78□□□□□ -1
ATXN3-234ENST00000555958 SOX13Q9UN79 622 aa8.78□□□□□ -1
ATXN3-234ENST00000555958 MAPK1P28482 360 aa8.77□□□□□ -1.01
ATXN3-234ENST00000555958 SUZ12Q15022 739 aaKnown RBP8.77□□□□□ -1.01
ATXN3-234ENST00000555958 SLC7A3Q8WY07 619 aa8.77□□□□□ -1.01
ATXN3-234ENST00000555958 BHLHE41Q9C0J9 482 aaPredicted RBP8.77□□□□□ -1.01
ATXN3-234ENST00000555958 DNAJC25Q9H1X3 360 aa8.77□□□□□ -1.01
ATXN3-234ENST00000555958 AKTIPQ9H8T0 292 aa8.77□□□□□ -1.01
ATXN3-234ENST00000555958 KCNK4Q9NYG8 393 aa8.77□□□□□ -1.01
ATXN3-234ENST00000555958 K7ELQ4 463 aaPredicted RBP8.76□□□□□ -1.01
ATXN3-234ENST00000555958 TM4SF5O14894 197 aa8.76□□□□□ -1.01
ATXN3-234ENST00000555958 DDX3YO15523 660 aaKnown RBP8.76□□□□□ -1.01
ATXN3-234ENST00000555958 ADAM23O75077 832 aa8.76□□□□□ -1.01
ATXN3-234ENST00000555958 PIP4K2BP78356 416 aa8.76□□□□□ -1.01
ATXN3-234ENST00000555958 PLCB3Q01970 1234 aa8.76□□□□□ -1.01
ATXN3-234ENST00000555958 KIAA0319Q5VV43 1072 aa8.76□□□□□ -1.01
ATXN3-234ENST00000555958 VN1R5Q7Z5H4 357 aa8.76□□□□□ -1.01
ATXN3-234ENST00000555958 WNT8BQ93098 351 aa8.76□□□□□ -1.01
ATXN3-234ENST00000555958 CSRNP1Q96S65 589 aa8.76□□□□□ -1.01
ATXN3-234ENST00000555958 LIN7BQ9HAP6 207 aa8.76□□□□□ -1.01
ATXN3-234ENST00000555958 METTL12A8MUP2 240 aa8.75□□□□□ -1.01
ATXN3-234ENST00000555958 PATL2C9JE40 543 aaKnown RBP8.75□□□□□ -1.01
ATXN3-234ENST00000555958 F8W735 103 aaPredicted RBP8.75□□□□□ -1.01
ATXN3-234ENST00000555958 SOX1O00570 391 aaPredicted RBP8.75□□□□□ -1.01
ATXN3-234ENST00000555958 ARL4DP49703 201 aa8.75□□□□□ -1.01
ATXN3-234ENST00000555958 IKBKEQ14164 716 aa8.75□□□□□ -1.01
ATXN3-234ENST00000555958 FOXD4L6Q3SYB3 417 aaPredicted RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms