RNA–Protein interactions for RNA: ENST00000555872.5

EFCAB11-208, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-208ENST00000555872 CBX8Q9HC52 389 aa11.99□□□□□ -0.49
EFCAB11-208ENST00000555872 NPHP4O75161 1426 aaPredicted RBP11.99□□□□□ -0.49
EFCAB11-208ENST00000555872 CCDC171Q6TFL3 1326 aa11.99□□□□□ -0.49
EFCAB11-208ENST00000555872 DTNBO60941 627 aa11.98□□□□□ -0.49
EFCAB11-208ENST00000555872 SYT1P21579 422 aa11.98□□□□□ -0.49
EFCAB11-208ENST00000555872 IFT88Q13099 833 aa11.98□□□□□ -0.49
EFCAB11-208ENST00000555872 GORABQ5T7V8 394 aa11.98□□□□□ -0.49
EFCAB11-208ENST00000555872 PLA2G4DQ86XP0 818 aa11.98□□□□□ -0.49
EFCAB11-208ENST00000555872 CKAP2LQ8IYA6 745 aa11.98□□□□□ -0.49
EFCAB11-208ENST00000555872 SMARCE1Q969G3 411 aa11.98□□□□□ -0.49
EFCAB11-208ENST00000555872 IPO5O00410 1097 aaKnown RBP11.98□□□□□ -0.49
EFCAB11-208ENST00000555872 F13A1P00488 732 aa11.98□□□□□ -0.49
EFCAB11-208ENST00000555872 ANO6Q4KMQ2 910 aa11.98□□□□□ -0.49
EFCAB11-208ENST00000555872 NYAP1Q6ZVC0 841 aa11.98□□□□□ -0.49
EFCAB11-208ENST00000555872 LARP6Q9BRS8 491 aaKnown RBP11.98□□□□□ -0.49
EFCAB11-208ENST00000555872 EXOC6BQ9Y2D4 811 aa11.98□□□□□ -0.49
EFCAB11-208ENST00000555872 AP1G2O75843 785 aa11.97□□□□□ -0.49
EFCAB11-208ENST00000555872 MAP3K11Q16584 847 aa11.97□□□□□ -0.49
EFCAB11-208ENST00000555872 NCAPG2Q86XI2 1143 aa11.97□□□□□ -0.49
EFCAB11-208ENST00000555872 OGFOD1Q8N543 542 aa11.97□□□□□ -0.49
EFCAB11-208ENST00000555872 RNF25Q96BH1 459 aaPredicted RBP11.97□□□□□ -0.49
EFCAB11-208ENST00000555872 MIEF2Q96C03 454 aa11.97□□□□□ -0.49
EFCAB11-208ENST00000555872 VEZTQ9HBM0 779 aa11.97□□□□□ -0.49
EFCAB11-208ENST00000555872 AMOTL2Q9Y2J4 779 aa11.97□□□□□ -0.49
EFCAB11-208ENST00000555872 RGS12O14924 1447 aa11.97□□□□□ -0.49
EFCAB11-208ENST00000555872 CDC42BPGQ6DT37 1551 aa11.97□□□□□ -0.49
EFCAB11-208ENST00000555872 TPM4P67936 248 aa11.97□□□□□ -0.49
EFCAB11-208ENST00000555872 E2F5Q15329 346 aa11.97□□□□□ -0.49
EFCAB11-208ENST00000555872 TSHZ3Q63HK5 1081 aa11.97□□□□□ -0.49
EFCAB11-208ENST00000555872 LRRC8AQ8IWT6 810 aa11.97□□□□□ -0.49
EFCAB11-208ENST00000555872 ESYT1Q9BSJ8 1104 aa11.97□□□□□ -0.49
EFCAB11-208ENST00000555872 MMTAG2Q9BU76 263 aaKnown RBP11.97□□□□□ -0.49
EFCAB11-208ENST00000555872 ZCCHC17Q9NP64 241 aaKnown RBP11.97□□□□□ -0.49
EFCAB11-208ENST00000555872 PUF60Q9UHX1 559 aaKnown RBP11.97□□□□□ -0.49
EFCAB11-208ENST00000555872 TBC1D2BQ9UPU7 963 aa11.97□□□□□ -0.49
EFCAB11-208ENST00000555872 ATP6V1DQ9Y5K8 247 aa11.97□□□□□ -0.49
EFCAB11-208ENST00000555872 A0A1W2PP64 1363 aa11.97□□□□□ -0.49
EFCAB11-208ENST00000555872 RPS6KA3P51812 740 aa11.96□□□□□ -0.49
EFCAB11-208ENST00000555872 LONRF3Q496Y0 759 aa11.96□□□□□ -0.49
EFCAB11-208ENST00000555872 RNF20Q5VTR2 975 aa11.96□□□□□ -0.49
EFCAB11-208ENST00000555872 SRLQ86TD4 932 aa11.96□□□□□ -0.49
EFCAB11-208ENST00000555872 LRRN4CLQ8ND94 238 aa11.96□□□□□ -0.49
EFCAB11-208ENST00000555872 CWC25Q9NXE8 425 aaPredicted RBP11.96□□□□□ -0.49
EFCAB11-208ENST00000555872 ERCC3P19447 782 aa11.96□□□□□ -0.49
EFCAB11-208ENST00000555872 RWDD2BP57060 319 aa11.96□□□□□ -0.49
EFCAB11-208ENST00000555872 CDC37Q16543 378 aaPredicted RBP11.96□□□□□ -0.49
EFCAB11-208ENST00000555872 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.96□□□□□ -0.49
EFCAB11-208ENST00000555872 THUMPD2Q9BTF0 503 aaKnown RBP11.96□□□□□ -0.49
EFCAB11-208ENST00000555872 NUP62CLQ9H1M0 184 aa11.96□□□□□ -0.49
EFCAB11-208ENST00000555872 ALDH1B1P30837 517 aa11.95□□□□□ -0.5
EFCAB11-208ENST00000555872 NKX1-1Q15270 411 aaPredicted RBP11.95□□□□□ -0.5
EFCAB11-208ENST00000555872 ARHGAP29Q52LW3 1261 aa11.95□□□□□ -0.5
EFCAB11-208ENST00000555872 RPUSD2Q8IZ73 545 aaKnown RBP11.95□□□□□ -0.5
EFCAB11-208ENST00000555872 ANKRD44Q8N8A2 993 aa11.95□□□□□ -0.5
EFCAB11-208ENST00000555872 CWC15Q9P013 229 aaKnown RBP11.95□□□□□ -0.5
EFCAB11-208ENST00000555872 CPSF1Q10570 1443 aaKnown RBP11.95□□□□□ -0.5
EFCAB11-208ENST00000555872 FMN2Q9NZ56 1722 aa11.95□□□□□ -0.5
EFCAB11-208ENST00000555872 MECOMQ03112 1051 aa11.95□□□□□ -0.5
EFCAB11-208ENST00000555872 GPS2Q13227 327 aa11.95□□□□□ -0.5
EFCAB11-208ENST00000555872 ELOA2Q8IYF1 753 aaPredicted RBP11.95□□□□□ -0.5
EFCAB11-208ENST00000555872 ARHGEF10LQ9HCE6 1279 aa11.95□□□□□ -0.5
EFCAB11-208ENST00000555872 RRP15Q9Y3B9 282 aaKnown RBP11.95□□□□□ -0.5
EFCAB11-208ENST00000555872 HDGFL2Q7Z4V5 671 aaPredicted RBP11.95□□□□□ -0.5
EFCAB11-208ENST00000555872 KCNB2Q92953 911 aa11.95□□□□□ -0.5
EFCAB11-208ENST00000555872 SYTL4Q96C24 671 aaPredicted RBP11.95□□□□□ -0.5
EFCAB11-208ENST00000555872 ABCB7O75027 752 aa11.94□□□□□ -0.5
EFCAB11-208ENST00000555872 PDE1AP54750 535 aa11.94□□□□□ -0.5
EFCAB11-208ENST00000555872 HSP90AB2PQ58FF8 381 aa11.94□□□□□ -0.5
EFCAB11-208ENST00000555872 TMCO3Q6UWJ1 677 aa11.94□□□□□ -0.5
EFCAB11-208ENST00000555872 API5Q9BZZ5 524 aaKnown RBP11.94□□□□□ -0.5
EFCAB11-208ENST00000555872 SYNRGQ9UMZ2 1314 aa11.94□□□□□ -0.5
EFCAB11-208ENST00000555872 EIF3JO75822 258 aaKnown RBP11.94□□□□□ -0.5
EFCAB11-208ENST00000555872 FAM200BP0CF97 657 aa11.94□□□□□ -0.5
EFCAB11-208ENST00000555872 HSPA2P54652 639 aa11.94□□□□□ -0.5
EFCAB11-208ENST00000555872 ZFYVE27Q5T4F4 411 aa11.94□□□□□ -0.5
EFCAB11-208ENST00000555872 HHATQ5VTY9 493 aa11.94□□□□□ -0.5
EFCAB11-208ENST00000555872 CEP85Q6P2H3 762 aa11.94□□□□□ -0.5
EFCAB11-208ENST00000555872 ZNF483Q8TF39 744 aaPredicted RBP11.94□□□□□ -0.5
EFCAB11-208ENST00000555872 SH3GL3Q99963 347 aa11.94□□□□□ -0.5
EFCAB11-208ENST00000555872 IRF2BPLQ9H1B7 796 aa11.94□□□□□ -0.5
EFCAB11-208ENST00000555872 TNMDQ9H2S6 317 aa11.94□□□□□ -0.5
EFCAB11-208ENST00000555872 TMEM165Q9HC07 324 aa11.94□□□□□ -0.5
EFCAB11-208ENST00000555872 NALCNQ8IZF0 1738 aa11.93□□□□□ -0.5
EFCAB11-208ENST00000555872 SMC2O95347 1197 aa11.93□□□□□ -0.5
EFCAB11-208ENST00000555872 ZNF165P49910 485 aa11.93□□□□□ -0.5
EFCAB11-208ENST00000555872 SLC7A5Q01650 507 aa11.93□□□□□ -0.5
EFCAB11-208ENST00000555872 AKNAD1Q5T1N1 836 aa11.93□□□□□ -0.5
EFCAB11-208ENST00000555872 NRKQ7Z2Y5 1582 aa11.93□□□□□ -0.5
EFCAB11-208ENST00000555872 FILIP1Q7Z7B0 1213 aa11.93□□□□□ -0.5
EFCAB11-208ENST00000555872 TAF4BQ92750 862 aa11.93□□□□□ -0.5
EFCAB11-208ENST00000555872 RILPL2Q969X0 211 aa11.93□□□□□ -0.5
EFCAB11-208ENST00000555872 PLEKHG2Q9H7P9 1386 aa11.93□□□□□ -0.5
EFCAB11-208ENST00000555872 LMCD1Q9NZU5 365 aa11.93□□□□□ -0.5
EFCAB11-208ENST00000555872 CCDC61Q9Y6R9 512 aa11.93□□□□□ -0.5
EFCAB11-208ENST00000555872 ANKARQ7Z5J8 1434 aa11.93□□□□□ -0.5
EFCAB11-208ENST00000555872 EME2A4GXA9 379 aaPredicted RBP11.93□□□□□ -0.5
EFCAB11-208ENST00000555872 ZRANB2O95218 330 aaKnown RBP eCLIP11.93□□□□□ -0.5
EFCAB11-208ENST00000555872 MAGEA9P43362 315 aa11.93□□□□□ -0.5
EFCAB11-208ENST00000555872 SLC5A9Q2M3M2 681 aa11.93□□□□□ -0.5
EFCAB11-208ENST00000555872 CCDC178Q5BJE1 867 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms