RNA–Protein interactions for RNA: ENST00000555353.5

FOXN3-209, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 1,595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-209ENST00000555353 COA1Q9GZY4 146 aa25.5■■□□□ 1.67
FOXN3-209ENST00000555353 CHMP4BQ9H444 224 aaKnown RBP25.5■■□□□ 1.67
FOXN3-209ENST00000555353 COPRSQ9NQ92 184 aa25.5■■□□□ 1.67
FOXN3-209ENST00000555353 PA2G4Q9UQ80 394 aaKnown RBP25.5■■□□□ 1.67
FOXN3-209ENST00000555353 POTECB2RU33 542 aa25.49■■□□□ 1.67
FOXN3-209ENST00000555353 CIAO1O76071 339 aa25.49■■□□□ 1.67
FOXN3-209ENST00000555353 LMOD1P29536 600 aaPredicted RBP25.49■■□□□ 1.67
FOXN3-209ENST00000555353 PDE8BO95263 885 aa25.48■■□□□ 1.67
FOXN3-209ENST00000555353 C15orf52Q6ZUT6 534 aaKnown RBP25.48■■□□□ 1.67
FOXN3-209ENST00000555353 HACL1Q9UJ83 578 aa25.48■■□□□ 1.67
FOXN3-209ENST00000555353 PNMA6EA0A0J9YXQ4 647 aa25.48■■□□□ 1.67
FOXN3-209ENST00000555353 PSMD14O00487 310 aa25.48■■□□□ 1.67
FOXN3-209ENST00000555353 KCNQ5Q9NR82 932 aa25.48■■□□□ 1.67
FOXN3-209ENST00000555353 PSME4Q14997 1843 aa25.47■■□□□ 1.67
FOXN3-209ENST00000555353 TOMM70O94826 608 aa25.47■■□□□ 1.67
FOXN3-209ENST00000555353 ATG9AQ7Z3C6 839 aa25.47■■□□□ 1.67
FOXN3-209ENST00000555353 ZNF804AQ7Z570 1209 aa25.47■■□□□ 1.67
FOXN3-209ENST00000555353 VGLL2Q8N8G2 317 aa25.47■■□□□ 1.67
FOXN3-209ENST00000555353 IL15P40933 162 aaPredicted RBP25.46■■□□□ 1.67
FOXN3-209ENST00000555353 GMPSP49915 693 aaPredicted RBP25.46■■□□□ 1.67
FOXN3-209ENST00000555353 SCNN1DP51172 638 aa25.46■■□□□ 1.67
FOXN3-209ENST00000555353 CRBNQ96SW2 442 aa25.46■■□□□ 1.67
FOXN3-209ENST00000555353 CEP126Q9P2H0 1117 aa25.46■■□□□ 1.67
FOXN3-209ENST00000555353 ATP8B2P98198 1209 aa25.45■■□□□ 1.66
FOXN3-209ENST00000555353 PUM3Q15397 648 aaKnown RBP25.45■■□□□ 1.66
FOXN3-209ENST00000555353 TAF1DQ9H5J8 278 aaPredicted RBP25.45■■□□□ 1.66
FOXN3-209ENST00000555353 IRS2Q9Y4H2 1338 aa25.45■■□□□ 1.66
FOXN3-209ENST00000555353 USP17L3A6NCW0 530 aa25.44■■□□□ 1.66
FOXN3-209ENST00000555353 USP17L4A6NCW7 530 aa25.44■■□□□ 1.66
FOXN3-209ENST00000555353 EPHX2P34913 555 aa25.44■■□□□ 1.66
FOXN3-209ENST00000555353 USP17L1Q7RTZ2 530 aa25.44■■□□□ 1.66
FOXN3-209ENST00000555353 CD209Q9NNX6 404 aa25.44■■□□□ 1.66
FOXN3-209ENST00000555353 ZBTB40Q9NUA8 1239 aa25.44■■□□□ 1.66
FOXN3-209ENST00000555353 GPRC5DQ9NZD1 345 aa25.44■■□□□ 1.66
FOXN3-209ENST00000555353 VIL1P09327 827 aaKnown RBP25.43■■□□□ 1.66
FOXN3-209ENST00000555353 ERICH6BQ5W0A0 696 aa25.43■■□□□ 1.66
FOXN3-209ENST00000555353 SSH3Q8TE77 659 aa25.43■■□□□ 1.66
FOXN3-209ENST00000555353 FBXW7Q969H0 707 aa25.43■■□□□ 1.66
FOXN3-209ENST00000555353 ZBTB12Q9Y330 459 aaPredicted RBP25.43■■□□□ 1.66
FOXN3-209ENST00000555353 IFIT1P09914 478 aaKnown RBP25.42■■□□□ 1.66
FOXN3-209ENST00000555353 RPS12P25398 132 aaKnown RBP25.42■■□□□ 1.66
FOXN3-209ENST00000555353 POLA2Q14181 598 aa25.42■■□□□ 1.66
FOXN3-209ENST00000555353 CEP85Q6P2H3 762 aa25.42■■□□□ 1.66
FOXN3-209ENST00000555353 RBM46Q8TBY0 533 aaKnown RBP25.42■■□□□ 1.66
FOXN3-209ENST00000555353 EPS15P42566 896 aa25.41■■□□□ 1.66
FOXN3-209ENST00000555353 GYG1P46976 350 aa25.41■■□□□ 1.66
FOXN3-209ENST00000555353 G3BP1Q13283 466 aaKnown RBP eCLIP25.41■■□□□ 1.66
FOXN3-209ENST00000555353 AAMPQ13685 434 aa25.41■■□□□ 1.66
FOXN3-209ENST00000555353 PNMA8AQ86V59 439 aaPredicted RBP25.41■■□□□ 1.66
FOXN3-209ENST00000555353 VPS37DQ86XT2 251 aa25.41■■□□□ 1.66
FOXN3-209ENST00000555353 SLC5A1P13866 664 aa25.4■■□□□ 1.66
FOXN3-209ENST00000555353 HIBADHP31937 336 aaKnown RBP25.4■■□□□ 1.66
FOXN3-209ENST00000555353 C1QTNF8P60827 252 aa25.4■■□□□ 1.66
FOXN3-209ENST00000555353 EAPPQ56P03 285 aaPredicted RBP25.4■■□□□ 1.66
FOXN3-209ENST00000555353 CAVIN4Q5BKX8 364 aa25.4■■□□□ 1.66
FOXN3-209ENST00000555353 EXOC6Q8TAG9 804 aa25.4■■□□□ 1.66
FOXN3-209ENST00000555353 LPIN2Q92539 896 aa25.4■■□□□ 1.66
FOXN3-209ENST00000555353 DPF2Q92785 391 aa25.4■■□□□ 1.66
FOXN3-209ENST00000555353 FGFR2P21802 821 aa25.39■■□□□ 1.66
FOXN3-209ENST00000555353 STRIP1Q5VSL9 837 aa25.39■■□□□ 1.66
FOXN3-209ENST00000555353 TTLL5Q6EMB2 1281 aa25.39■■□□□ 1.66
FOXN3-209ENST00000555353 RSBN1LQ6PCB5 846 aaPredicted RBP25.39■■□□□ 1.66
FOXN3-209ENST00000555353 CNOT7Q9UIV1 285 aaKnown RBP25.39■■□□□ 1.66
FOXN3-209ENST00000555353 H7C1D1 291 aa25.39■■□□□ 1.65
FOXN3-209ENST00000555353 IL1R1P14778 569 aa25.39■■□□□ 1.65
FOXN3-209ENST00000555353 ATP2B3Q16720 1220 aa25.39■■□□□ 1.65
FOXN3-209ENST00000555353 AGBL3Q8NEM8 1001 aa25.39■■□□□ 1.65
FOXN3-209ENST00000555353 FAM84BQ96KN1 310 aaPredicted RBP25.39■■□□□ 1.65
FOXN3-209ENST00000555353 GTF2IP78347 998 aa25.38■■□□□ 1.65
FOXN3-209ENST00000555353 OS9Q13438 667 aaPredicted RBP25.38■■□□□ 1.65
FOXN3-209ENST00000555353 MICALL2Q8IY33 904 aa25.38■■□□□ 1.65
FOXN3-209ENST00000555353 SMC1BQ8NDV3 1235 aa25.38■■□□□ 1.65
FOXN3-209ENST00000555353 ADARB2Q9NS39 739 aaKnown RBP25.38■■□□□ 1.65
FOXN3-209ENST00000555353 SURF6O75683 361 aaKnown RBP25.37■■□□□ 1.65
FOXN3-209ENST00000555353 DACT2Q5SW24 774 aa25.37■■□□□ 1.65
FOXN3-209ENST00000555353 RPAP2Q8IXW5 612 aaPredicted RBP25.37■■□□□ 1.65
FOXN3-209ENST00000555353 MYO3BQ8WXR4 1341 aa25.36■■□□□ 1.65
FOXN3-209ENST00000555353 TFCP2Q12800 502 aa25.36■■□□□ 1.65
FOXN3-209ENST00000555353 USP50Q70EL3 339 aaPredicted RBP25.36■■□□□ 1.65
FOXN3-209ENST00000555353 FBXO33Q7Z6M2 555 aa25.36■■□□□ 1.65
FOXN3-209ENST00000555353 LDHDQ86WU2 507 aa25.36■■□□□ 1.65
FOXN3-209ENST00000555353 AKAP2Q9Y2D5 859 aa25.36■■□□□ 1.65
FOXN3-209ENST00000555353 ZNF646O15015 1829 aaPredicted RBP25.36■■□□□ 1.65
FOXN3-209ENST00000555353 ZNF609O15014 1411 aa25.36■■□□□ 1.65
FOXN3-209ENST00000555353 POTEIP0CG38 1075 aa25.35■■□□□ 1.65
FOXN3-209ENST00000555353 POTEJP0CG39 1038 aa25.35■■□□□ 1.65
FOXN3-209ENST00000555353 CLEC11AQ9Y240 323 aa25.35■■□□□ 1.65
FOXN3-209ENST00000555353 HMMRO75330 724 aa25.35■■□□□ 1.65
FOXN3-209ENST00000555353 FRAT2O75474 233 aaPredicted RBP25.35■■□□□ 1.65
FOXN3-209ENST00000555353 FSTL1Q12841 308 aa25.35■■□□□ 1.65
FOXN3-209ENST00000555353 TDRD7Q8NHU6 1098 aaKnown RBP25.35■■□□□ 1.65
FOXN3-209ENST00000555353 SHTN1A0MZ66 631 aa25.34■■□□□ 1.65
FOXN3-209ENST00000555353 SASH1O94885 1247 aa25.34■■□□□ 1.65
FOXN3-209ENST00000555353 BCAMP50895 628 aa25.34■■□□□ 1.65
FOXN3-209ENST00000555353 MXD3Q9BW11 206 aa25.34■■□□□ 1.65
FOXN3-209ENST00000555353 CHADLQ6NUI6 762 aa25.33■■□□□ 1.65
FOXN3-209ENST00000555353 GMLQ99445 158 aa25.33■■□□□ 1.65
FOXN3-209ENST00000555353 NOP58Q9Y2X3 529 aaKnown RBP25.33■■□□□ 1.65
FOXN3-209ENST00000555353 MYH13Q9UKX3 1938 aa25.32■■□□□ 1.64
FOXN3-209ENST00000555353 USP17L8P0C7I0 530 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms